Variant report

Variant	nsv569909
Chromosome Location	chr15:72177659-72250741
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:224)
CpG islands
(count:61)
Chromatin interactive
region (count:18)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:224 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:72212595-72212649	K562	blood:	n/a	n/a
2	ARID3A	chr15:72213921-72213933	K562	blood:	n/a	n/a
3	ATF2	chr15:72206368-72206921	GM12878	blood:	n/a	n/a
4	BACH1	chr15:72222151-72222156	K562	blood:	n/a	n/a
5	BATF	chr15:72206431-72206854	GM12878	blood:	n/a	chr15:72206656-72206667
6	BATF	chr15:72206435-72206822	GM12878	blood:	n/a	chr15:72206656-72206667
7	BCL11A	chr15:72206400-72206839	GM12878	blood:	n/a	n/a
8	BCL11A	chr15:72229896-72230301	GM12878	blood:	n/a	n/a
9	BCL11A	chr15:72232433-72232749	GM12878	blood:	n/a	chr15:72232503-72232512
10	BCL11A	chr15:72206377-72206869	GM12878	blood:	n/a	n/a
11	BCL11A	chr15:72229951-72230355	GM12878	blood:	n/a	n/a
12	BCL3	chr15:72206413-72206809	GM12878	blood:	n/a	n/a
13	BHLHE40	chr15:72232438-72232555	GM12878	blood:	n/a	n/a
14	BHLHE40	chr15:72230009-72230471	GM12878	blood:	n/a	n/a
15	BHLHE40	chr15:72183574-72183575	K562	blood:	n/a	n/a
16	CBX3	chr15:72223707-72223865	K562	blood:	n/a	n/a
17	CEBPB	chr15:72228611-72228922	A549	lung:	n/a	chr15:72228745-72228756
18	CEBPB	chr15:72247752-72248035	IMR90	lung:	n/a	n/a
19	CEBPB	chr15:72234477-72234640	HepG2	liver:	n/a	chr15:72234521-72234532
20	CEBPB	chr15:72229831-72229991	A549	lung:	n/a	chr15:72229885-72229896
21	CEBPB	chr15:72229819-72229998	HepG2	liver:	n/a	chr15:72229885-72229896
22	CEBPB	chr15:72229773-72230036	IMR90	lung:	n/a	chr15:72229885-72229896
23	CEBPB	chr15:72228588-72228918	HepG2	liver:	n/a	chr15:72228745-72228756
24	CEBPB	chr15:72179288-72179290	A549	lung:	n/a	n/a
25	CEBPB	chr15:72243415-72243732	IMR90	lung:	n/a	chr15:72243539-72243551
26	CTCF	chr15:72218574-72218639	Fibrobl	skin:	n/a	n/a
27	CTCF	chr15:72192683-72192728	GM13977	blood:	n/a	n/a
28	CTCF	chr15:72196712-72196751	GM20000	blood:	n/a	n/a
29	CTCF	chr15:72233690-72233741	GM12891	blood:	n/a	n/a
30	CTCF	chr15:72213308-72213341	GM20000	blood:	n/a	n/a
31	CUX1	chr15:72229977-72230668	GM12878	blood:	n/a	n/a
32	CUX1	chr15:72183584-72183722	GM12878	blood:	n/a	n/a
33	CUX1	chr15:72232342-72232362	GM12878	blood:	n/a	n/a
34	E2F4	chr15:72236139-72236700	MCF10A-Er-Src	breast:	n/a	n/a
35	E2F4	chr15:72221607-72221751	MCF10A-Er-Src	breast:	n/a	n/a
36	EBF1	chr15:72206458-72206945	GM12878	blood:	n/a	n/a
37	EBF1	chr15:72181148-72181474	GM12878	blood:	n/a	n/a
38	EBF1	chr15:72229883-72230530	GM12878	blood:	n/a	n/a
39	EBF1	chr15:72178617-72178803	GM12878	blood:	n/a	n/a
40	EBF1	chr15:72181133-72181443	GM12878	blood:	n/a	n/a
41	EBF1	chr15:72232393-72232670	GM12878	blood:	n/a	n/a
42	EBF1	chr15:72206533-72206945	GM12878	blood:	n/a	n/a
43	EBF1	chr15:72206577-72206859	GM12878	blood:	n/a	n/a
44	ELF1	chr15:72183461-72183819	K562	blood:	n/a	chr15:72183665-72183676 chr15:72183664-72183677
45	EP300	chr15:72232367-72232680	GM12878	blood:	n/a	chr15:72232498-72232512
46	EP300	chr15:72208178-72209967	SK-N-SH	brain:	n/a	chr15:72208194-72208203 chr15:72208265-72208279 chr15:72208546-72208560
47	EP300	chr15:72209204-72209651	SK-N-SH_RA	brain:	n/a	n/a
48	EP300	chr15:72180946-72180948	K562	blood:	n/a	n/a
49	EP300	chr15:72230003-72230543	GM12878	blood:	n/a	n/a
50	EP300	chr15:72232547-72232549	GM12878	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:72178118-72178168	A549	lung:	n/a
2	chr15:72178118-72178168	NHBE	bronchial:	n/a
3	chr15:72178118-72178168	HCM	heart:	n/a
4	chr15:72178118-72178168	GM12892	blood:	n/a
5	chr15:72178118-72178168	H1-hESC	embryonic stem cell:	embryo
6	chr15:72178118-72178168	MCF10A-Er-Src	breast:	n/a
7	chr15:72178118-72178168	LNCaP	prostate:	n/a
8	chr15:72178118-72178168	AG04450	lung:	fetal
9	chr15:72178118-72178168	IMR90	lung:	fetal
10	chr15:72178118-72178168	AG09319	gingival:	n/a
11	chr15:72178118-72178168	HRPEpiC	eye:	n/a
12	chr15:72178118-72178168	K562	blood:	n/a
13	chr15:72178118-72178168	NHDF-neo	bronchial:	n/a
14	chr15:72178118-72178168	CMK	blood:	n/a
15	chr15:72178118-72178168	AG09309	skin:	n/a
16	chr15:72178118-72178168	Hela-S3	cervix:	n/a
17	chr15:72178118-72178168	GM12878	blood:	n/a
18	chr15:72178118-72178168	NT2-D1	testis:	n/a
19	chr15:72178118-72178168	ECC-1	luminal epithelium:	n/a
20	chr15:72178118-72178168	AG10803	skin:	n/a
21	chr15:72178118-72178168	BE2_C	brain:	n/a
22	chr15:72178118-72178168	AG04449	skin:	fetal
23	chr15:72178118-72178168	Jurkat	blood:	n/a
24	chr15:72178118-72178168	ovcar-3	ovarian:	n/a
25	chr15:72178118-72178168	HPAEpiC	pulmonary alveolar:	n/a
26	chr15:72178118-72178168	GM19239	blood:	n/a
27	chr15:72178118-72178168	SAEC	small airway:	n/a
28	chr15:72178118-72178168	GM12891	blood:	n/a
29	chr15:72178118-72178168	HRE	kidney:	n/a
30	chr15:72178118-72178168	HL-60	blood:	n/a
31	chr15:72178118-72178168	NB4	blood:	n/a
32	chr15:72178118-72178168	PrEC	prostate:	n/a
33	chr15:72178118-72178168	GM06990	blood:	n/a
34	chr15:72178118-72178168	HIPEpiC	eye:	n/a
35	chr15:72178118-72178168	ProgFib	skin:	n/a
36	chr15:72178118-72178168	MCF-7	breast:	n/a
37	chr15:72178118-72178168	T-47D	breast:	n/a
38	chr15:72178118-72178168	HAEpiC	amniotic membrane:	n/a
39	chr15:72178118-72178168	SK-N-SH	brain:	n/a
40	chr15:72178118-72178168	U87	brain:	n/a
41	chr15:72178118-72178168	BJ	skin:	n/a
42	chr15:72178118-72178168	HCF	heart:	n/a
43	chr15:72178118-72178168	PFSK-1	brain:	n/a
44	chr15:72178118-72178168	HEEpiC	esophagus:	n/a
45	chr15:72178118-72178168	AoSMC	blood vessel:	n/a
46	chr15:72178118-72178168	SKMC	muscle:	n/a
47	chr15:72178118-72178168	HCT-116	colon:	n/a
48	chr15:72178118-72178168	HEK293	kidney:	embryo
49	chr15:72178118-72178168	NH-A	brain:	n/a
50	chr15:72178118-72178168	RPTEC	kidney:	n/a

(count:18 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:72187197..72189830-chr15:72197152..72199761,2	K562	blood:
2	chr15:72176973..72179854-chr15:72407858..72409826,2	MCF-7	breast:
3	chr15:72197435..72199145-chr15:72206196..72207927,2	K562	blood:
4	chr15:72204090..72205988-chr15:72208798..72210918,2	K562	blood:
5	chr15:72183241..72185017-chr15:72188166..72190098,2	MCF-7	breast:
6	chr15:72225351..72227489-chr15:72231458..72233712,2	K562	blood:
7	chr15:72197435..72199145-chr15:72206196..72207927,2	K562	blood:
8	chr15:72229730..72230693-chr8:133827437..133828301,2	MCF-7	breast:
9	chr15:72187197..72189830-chr15:72197152..72199761,2	K562	blood:
10	chr15:72173982..72176259-chr15:72181202..72184060,3	K562	blood:
11	chr15:72180763..72183209-chr15:72189285..72191973,2	MCF-7	breast:
12	chr15:72183241..72185017-chr15:72188166..72190098,2	MCF-7	breast:
13	chr15:72225351..72227489-chr15:72231458..72233712,2	K562	blood:
14	chr15:72190232..72191910-chr15:72203994..72206448,2	MCF-7	breast:
15	chr15:72177869..72180074-chr15:72180572..72182469,2	MCF-7	breast:
16	chr15:72204090..72205988-chr15:72208798..72210918,2	K562	blood:
17	chr15:72249559..72254389-chr15:72257826..72261874,6	MCF-7	breast:
18	chr15:72180763..72183209-chr15:72189285..72191973,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GRAMD2-4	chr15:72185803-72186119	NONHSAT047057
2	lnc-GRAMD2-4	chr15:72189802-72190154	NONHSAT047057

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	MYO9A	hsa-let-7c-5p	chr15:72183618-72183640

Variant related genes	Relation type
MYO9A	TF binding region
MYO9A	CpG island
ENSG00000066933	chromatin interactions
ENSG00000166192	chromatin interactions

Extended variants
information (count: 2538 )
Associated
traits (count: 79 )

Variant overlapped rSNPs/rCNVs (count:2538 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12903304	chr15:72177659-72177660	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs562435892	chr15:72177685-72177686	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs182550106	chr15:72177696-72177697	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs550987987	chr15:72177714-72177715	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs139910540	chr15:72177761-72177762	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs370875029	chr15:72177810-72177811	Enhancers Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs6494975	chr15:72177825-72177826	Enhancers Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs149823962	chr15:72177859-72177860	Enhancers Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs549515215	chr15:72177861-72177862	Enhancers Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs561402842	chr15:72177892-72177893	Enhancers Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs187592170	chr15:72177903-72177904	Enhancers Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs190444532	chr15:72177904-72177905	Enhancers Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs184074818	chr15:72177953-72177954	Enhancers Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs188930198	chr15:72178001-72178002	Enhancers Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs71395046	chr15:72178145-72178146	Enhancers Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs551327548	chr15:72178273-72178274	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs372716032	chr15:72178354-72178355	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs537141282	chr15:72178356-72178357	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs555019726	chr15:72178463-72178464	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs573445745	chr15:72178492-72178493	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs8033997	chr15:72178497-72178498	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs555952530	chr15:72178530-72178531	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs577824332	chr15:72178532-72178533	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs397854049	chr15:72178536-72178537	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs34921688	chr15:72178555-72178556	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs373027901	chr15:72178556-72178557	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs79709615	chr15:72178558-72178559	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs140568849	chr15:72178677-72178678	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs566200350	chr15:72178679-72178680	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs544999155	chr15:72178687-72178688	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs145650196	chr15:72178720-72178721	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs572333987	chr15:72178837-72178838	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs367698373	chr15:72178842-72178843	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs561364678	chr15:72178894-72178895	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs531851813	chr15:72178908-72178909	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs543985707	chr15:72178929-72178930	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs28485920	chr15:72178974-72178975	Weak transcription Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs535094643	chr15:72179133-72179134	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs114403766	chr15:72179148-72179149	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs547755675	chr15:72179155-72179156	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs566387984	chr15:72179159-72179160	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs11633167	chr15:72179178-72179179	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
43	rs548612055	chr15:72179186-72179187	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs149134280	chr15:72179338-72179339	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs74022467	chr15:72179342-72179343	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs115472479	chr15:72179350-72179351	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs559620395	chr15:72179425-72179426	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs575450195	chr15:72179551-72179552	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs538190083	chr15:72179603-72179604	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs117351614	chr15:72179623-72179624	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:79)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Prostate cancer	16573809	CNVD
Autism	17322880	CNVD
Autism	20678247	CNVD
Retinoblastoma	21504564	CNVD
Matthew-Wood syndrome	21085971	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Urothelial cell carcinoma	18451213	CNVD
phobic disorder	16773131	CNVD
Autism	21480499	CNVD
Disorders of sex development	22290220	CNVD
Mental retardation	19951919	CNVD
Mental retardation	16773131	CNVD
T-cell lymphomas	19863542	CNVD
15q24 microdeletion syndrome	22180641	CNVD
15q24 microdeletion syndrome	19921647	CNVD
Disease	22216833	CNVD
Mental retardation	17360722	CNVD
15q24 microdeletion syndrome	22216833	CNVD
15q24 microdeletion syndrome	22283845	CNVD
Developmental delay	17932688	CNVD
craniofacial dysmorphism	17932688	CNVD
digital and genital abnormalities	17932688	CNVD
Mental retardation	17621639	CNVD
Autism	20808228	CNVD
Breast cancer	21364760	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Urothelial carcinoma	21177765	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Renal cell carcinoma	21215367	CNVD
Melanoma	20877625	CNVD

Chromatin state (count:1315 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:72114600-72190600	Weak transcription	Pancreas	Pancrea
2	chr15:72122200-72189400	Weak transcription	Right Ventricle	heart
3	chr15:72122400-72195000	Weak transcription	NHEK	skin
4	chr15:72122600-72185200	Weak transcription	Esophagus	oesophagus
5	chr15:72122600-72195800	Weak transcription	Gastric	stomach
6	chr15:72131800-72192800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
7	chr15:72142600-72183400	Weak transcription	Brain Angular Gyrus	brain
8	chr15:72142600-72189600	Weak transcription	NHLF	lung
9	chr15:72142600-72199200	Weak transcription	Hela-S3	cervix
10	chr15:72142800-72184800	Weak transcription	A549	lung
11	chr15:72142800-72190200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr15:72143000-72190600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr15:72143000-72190600	Weak transcription	Colonic Mucosa	Colon
14	chr15:72144600-72223400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
15	chr15:72145400-72190600	Weak transcription	Spleen	Spleen
16	chr15:72145600-72182800	Weak transcription	Brain Cingulate Gyrus	brain
17	chr15:72145600-72184800	Weak transcription	Lung	lung
18	chr15:72149200-72186000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr15:72153200-72189600	Weak transcription	Rectal Smooth Muscle	rectum
20	chr15:72161000-72211000	Weak transcription	Small Intestine	intestine
21	chr15:72162600-72187600	Strong transcription	Placenta	Placenta
22	chr15:72164000-72190600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr15:72164000-72190600	Weak transcription	Aorta	Aorta
24	chr15:72164000-72218400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr15:72165400-72190800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
26	chr15:72166200-72181800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr15:72167000-72197800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr15:72167600-72181600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr15:72168800-72180400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
30	chr15:72168800-72190800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr15:72169000-72180400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr15:72170200-72194000	Weak transcription	Fetal Intestine Small	intestine
33	chr15:72171200-72192600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
34	chr15:72171400-72180200	Strong transcription	Rectal Mucosa Donor 31	rectum
35	chr15:72172400-72179600	Weak transcription	HMEC	breast
36	chr15:72172400-72192000	Weak transcription	Thymus	Thymus
37	chr15:72172600-72185200	Weak transcription	Cortex derived primary cultured neurospheres	brain
38	chr15:72172600-72190200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
39	chr15:72172800-72177800	Weak transcription	NH-A	brain
40	chr15:72172800-72178000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr15:72172800-72183000	Weak transcription	Brain Hippocampus Middle	brain
42	chr15:72172800-72186000	Weak transcription	Muscle Satellite Cultured Cells	--
43	chr15:72172800-72190000	Weak transcription	Duodenum Mucosa	Duodenum
44	chr15:72172800-72190800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
45	chr15:72172800-72190800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
46	chr15:72173000-72179600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
47	chr15:72173000-72183000	Weak transcription	Brain Substantia Nigra	brain
48	chr15:72173000-72184800	Weak transcription	Primary T cells from cord blood	blood
49	chr15:72173000-72190000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
50	chr15:72173000-72200600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links