Variant report

Variant	nsv570716
Chromosome Location	chr15:99629901-99916332
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4543)
CpG islands
(count:3851)
Chromatin interactive
region (count:192)
LncRNA
region (count:16)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:4543 , 50 per page) page: 1 2 3 4 5 6 7 ... 91

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:99852295-99853142	K562	blood:	n/a	n/a
2	ARID3A	chr15:99640840-99641111	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:99790922-99791899	HepG2	liver:	n/a	n/a
4	ARID3A	chr15:99826755-99826938	HepG2	liver:	n/a	n/a
5	ARID3A	chr15:99663907-99664294	HepG2	liver:	n/a	n/a
6	ARID3A	chr15:99880457-99880856	HepG2	liver:	n/a	chr15:99880645-99880661
7	ARID3A	chr15:99808749-99809017	HepG2	liver:	n/a	n/a
8	ARID3A	chr15:99791850-99792363	K562	blood:	n/a	n/a
9	ARID3A	chr15:99846228-99846789	HepG2	liver:	n/a	chr15:99846306-99846322
10	ARID3A	chr15:99797553-99797840	HepG2	liver:	n/a	n/a
11	ARID3A	chr15:99675429-99675642	HepG2	liver:	n/a	n/a
12	ARID3A	chr15:99813243-99813446	K562	blood:	n/a	n/a
13	ARID3A	chr15:99883375-99883659	HepG2	liver:	n/a	n/a
14	ARID3A	chr15:99672046-99672196	HepG2	liver:	n/a	n/a
15	ARID3A	chr15:99720638-99721264	HepG2	liver:	n/a	n/a
16	ARID3A	chr15:99901823-99902129	K562	blood:	n/a	n/a
17	ARID3A	chr15:99901786-99902089	HepG2	liver:	n/a	n/a
18	ARID3A	chr15:99696371-99696505	K562	blood:	n/a	n/a
19	ATF1	chr15:99850971-99851292	K562	blood:	n/a	n/a
20	ATF1	chr15:99696146-99696731	K562	blood:	n/a	n/a
21	ATF1	chr15:99791001-99791616	K562	blood:	n/a	n/a
22	ATF1	chr15:99864437-99864834	K562	blood:	n/a	n/a
23	ATF1	chr15:99852443-99852972	K562	blood:	n/a	n/a
24	ATF1	chr15:99813211-99813447	K562	blood:	n/a	n/a
25	ATF1	chr15:99829160-99829174	K562	blood:	n/a	n/a
26	ATF1	chr15:99647729-99647795	K562	blood:	n/a	n/a
27	ATF1	chr15:99798217-99798327	K562	blood:	n/a	n/a
28	ATF2	chr15:99630375-99631009	GM12878	blood:	n/a	n/a
29	ATF2	chr15:99630426-99631075	GM12878	blood:	n/a	n/a
30	ATF2	chr15:99790825-99791768	GM12878	blood:	n/a	n/a
31	ATF2	chr15:99675396-99675980	GM12878	blood:	n/a	n/a
32	ATF2	chr15:99791342-99791717	H1-hESC	embryonic stem cell:	n/a	n/a
33	ATF2	chr15:99640697-99641075	H1-hESC	embryonic stem cell:	n/a	n/a
34	ATF2	chr15:99779778-99780446	GM12878	blood:	n/a	n/a
35	ATF2	chr15:99779751-99780513	GM12878	blood:	n/a	n/a
36	ATF2	chr15:99791049-99791639	GM12878	blood:	n/a	n/a
37	ATF2	chr15:99911569-99912248	GM12878	blood:	n/a	n/a
38	ATF2	chr15:99675290-99675939	GM12878	blood:	n/a	n/a
39	ATF2	chr15:99791241-99791627	H1-hESC	embryonic stem cell:	n/a	n/a
40	ATF2	chr15:99864284-99864957	GM12878	blood:	n/a	n/a
41	ATF2	chr15:99640731-99641086	H1-hESC	embryonic stem cell:	n/a	n/a
42	ATF2	chr15:99864341-99864893	GM12878	blood:	n/a	n/a
43	ATF3	chr15:99790726-99791552	A549	lung:	n/a	n/a
44	ATF3	chr15:99864139-99865019	HCT-116	colon:	n/a	n/a
45	ATF3	chr15:99863947-99864628	A549	lung:	n/a	n/a
46	ATF3	chr15:99644815-99645555	A549	lung:	n/a	chr15:99645174-99645183 chr15:99645241-99645250
47	ATF3	chr15:99864085-99864956	A549	lung:	n/a	n/a
48	ATF3	chr15:99663704-99664570	A549	lung:	n/a	n/a
49	ATF3	chr15:99663740-99664597	A549	lung:	n/a	n/a
50	BACH1	chr15:99644980-99645179	H1-hESC	embryonic stem cell:	n/a	n/a

(count:3851 , 50 per page) page: 1 2 3 4 5 6 7 ... 78

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:99789661-99789711	AG04449	skin:	fetal
2	chr15:99640813-99640863	NHDF-neo	bronchial:	n/a
3	chr15:99637068-99637118	Caco-2	colon:	n/a
4	chr15:99789777-99789827	HIPEpiC	eye:	n/a
5	chr15:99791485-99791535	U87	brain:	n/a
6	chr15:99669970-99670020	HRPEpiC	eye:	n/a
7	chr15:99795399-99795449	HEEpiC	esophagus:	n/a
8	chr15:99640746-99640796	U87	brain:	n/a
9	chr15:99789661-99789711	AG04449	skin:	fetal
10	chr15:99640813-99640863	NHDF-neo	bronchial:	n/a
11	chr15:99637068-99637118	Caco-2	colon:	n/a
12	chr15:99789777-99789827	HIPEpiC	eye:	n/a
13	chr15:99791485-99791535	U87	brain:	n/a
14	chr15:99669970-99670020	HRPEpiC	eye:	n/a
15	chr15:99795399-99795449	HEEpiC	esophagus:	n/a
16	chr15:99640746-99640796	U87	brain:	n/a
17	chr15:99791109-99791159	H1-hESC	embryonic stem cell:	embryo
18	chr15:99752192-99752242	AG04450	lung:	fetal
19	chr15:99670386-99670436	Caco-2	colon:	n/a
20	chr15:99791109-99791159	SAEC	small airway:	n/a
21	chr15:99645227-99645277	PrEC	prostate:	n/a
22	chr15:99709980-99710030	LNCaP	prostate:	n/a
23	chr15:99645088-99645138	K562	blood:	n/a
24	chr15:99791546-99791596	HCPEpiC	choroid plexus:	n/a
25	chr15:99836575-99836625	HPAEpiC	pulmonary alveolar:	n/a
26	chr15:99646443-99646493	HNPCEpiC	eye:	n/a
27	chr15:99676703-99676753	SK-N-SH_RA	brain:	n/a
28	chr15:99644973-99645023	HPAEpiC	pulmonary alveolar:	n/a
29	chr15:99645031-99645081	BE2_C	brain:	n/a
30	chr15:99671103-99671153	HCM	heart:	n/a
31	chr15:99658349-99658399	HIPEpiC	eye:	n/a
32	chr15:99791485-99791535	GM12891	blood:	n/a
33	chr15:99640746-99640796	AoSMC	blood vessel:	n/a
34	chr15:99671805-99671855	AG10803	skin:	n/a
35	chr15:99640754-99640804	MCF10A-Er-Src	breast:	n/a
36	chr15:99791485-99791535	HMEC	breast:	n/a
37	chr15:99645435-99645485	GM12878	blood:	n/a
38	chr15:99752192-99752242	SK-N-MC	brain:	n/a
39	chr15:99645031-99645081	ProgFib	skin:	n/a
40	chr15:99645227-99645277	GM12878	blood:	n/a
41	chr15:99645088-99645138	HUVEC	blood vessel:	n/a
42	chr15:99715925-99715975	HepG2	liver:	n/a
43	chr15:99646202-99646252	IMR90	lung:	fetal
44	chr15:99792144-99792194	HIPEpiC	eye:	n/a
45	chr15:99669970-99670020	BJ	skin:	n/a
46	chr15:99664148-99664198	HepG2	liver:	n/a
47	chr15:99836575-99836625	HUVEC	blood vessel:	n/a
48	chr15:99671103-99671153	ECC-1	luminal epithelium:	n/a
49	chr15:99640471-99640521	HEEpiC	esophagus:	n/a
50	chr15:99640754-99640804	HNPCEpiC	eye:	n/a

(count:192 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr15:99845791..99847734-chr15:99849228..99852501,3	K562	blood:
2	chr15:99820578..99822487-chr15:99824198..99826248,2	MCF-7	breast:
3	chr15:99640796..99641313-chr15:99752001..99752808,2	MCF-7	breast:
4	chr15:99883235..99885875-chr15:99888389..99889955,2	K562	blood:
5	chr15:99677279..99681777-chr15:99693510..99696751,5	MCF-7	breast:
6	chr15:99791782..99793591-chr15:99794191..99796456,2	K562	blood:
7	chr15:99644019..99646805-chr15:99757857..99759716,2	MCF-7	breast:
8	chr15:99640426..99641482-chr15:99753072..99754322,8	K562	blood:
9	chr15:99688236..99691160-chr15:99691994..99693833,2	MCF-7	breast:
10	chr15:99640023..99641527-chr15:99752943..99754403,15	MCF-7	breast:
11	chr15:99762009..99765655-chr15:99790108..99792308,4	MCF-7	breast:
12	chr15:99677279..99681777-chr15:99693510..99696751,5	MCF-7	breast:
13	chr15:99807323..99810075-chr15:100272302..100274258,2	MCF-7	breast:
14	chr15:99645187..99645735-chr5:79703316..79703974,2	Hela-S3	cervix:
15	chr15:99663432..99665582-chr15:99669095..99671723,2	MCF-7	breast:
16	chr15:99813138..99813798-chr15:100269841..100270582,3	MCF-7	breast:
17	chr15:99644580..99645568-chr15:99753087..99754058,10	MCF-7	breast:
18	chr15:99790548..99791387-chr6:27114149..27115082,2	Hela-S3	cervix:
19	chr15:99767475..99769524-chr15:99789564..99792407,2	MCF-7	breast:
20	chr15:99737190..99739756-chr15:99764410..99766560,2	K562	blood:
21	chr15:99694775..99697545-chr15:99701020..99702847,2	MCF-7	breast:
22	chr15:99697354..99699660-chr15:99705124..99708746,3	K562	blood:
23	chr15:99773963..99776603-chr15:99777623..99779591,2	MCF-7	breast:
24	chr15:99710775..99711458-chr15:99753056..99753732,2	MCF-7	breast:
25	chr15:99761212..99763784-chr15:99766463..99769175,2	MCF-7	breast:
26	chr15:99756826..99758963-chr15:99762396..99763956,2	MCF-7	breast:
27	chr15:99753444..99755273-chr15:99777428..99780031,2	MCF-7	breast:
28	chr15:99772440..99774035-chr15:99789890..99791427,2	MCF-7	breast:
29	chr15:99753612..99755555-chr15:99762228..99764358,2	MCF-7	breast:
30	chr15:99666526..99668352-chr15:99670982..99673929,2	MCF-7	breast:
31	chr15:99644880..99645539-chr15:99710412..99710990,2	MCF-7	breast:
32	chr15:99883235..99885875-chr15:99888389..99889955,2	K562	blood:
33	chr15:99640578..99641378-chr15:99747586..99748139,3	MCF-7	breast:
34	chr15:99791320..99794083-chr15:99831622..99834139,2	K562	blood:
35	chr15:99660192..99663154-chr15:99718347..99720346,2	MCF-7	breast:
36	chr15:99640195..99641427-chr15:99752886..99754076,8	MCF-7	breast:
37	chr15:99639243..99641590-chr15:99753533..99755577,2	MCF-7	breast:
38	chr15:99889586..99891460-chr15:99894406..99897341,2	K562	blood:
39	chr15:99753612..99755555-chr15:99762228..99764358,2	MCF-7	breast:
40	chr15:99679327..99680964-chr15:99681038..99683215,2	MCF-7	breast:
41	chr15:99644031..99646464-chr15:99746513..99749494,3	MCF-7	breast:
42	chr15:99776229..99778768-chr15:99786778..99789073,2	K562	blood:
43	chr15:99856389..99859314-chr15:99863031..99866195,3	MCF-7	breast:
44	chr15:99710991..99713065-chr15:99713297..99715129,2	K562	blood:
45	chr15:99639780..99642328-chr15:99644918..99646902,2	MCF-7	breast:
46	chr15:99649446..99651244-chr15:99703848..99705856,2	K562	blood:
47	chr15:99804185..99806716-chr15:99808711..99810346,2	MCF-7	breast:
48	chr15:45003258..45003898-chr15:99790871..99791766,2	NB4	blood:
49	chr15:99856565..99859133-chr15:99884132..99886600,2	MCF-7	breast:
50	chr15:99644709..99645388-chr15:99791744..99792284,2	MCF-7	breast:

(count:16 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SYNM-2	chr15:99684622-99685575	ENSG00000261616.1
2	lnc-PGPEP1L-1	chr15:99640926-99641040	XLOC_011607
3	lnc-SYNM-1	chr15:99637426-99637794	XLOC_011380
4	lnc-TTC23-4	chr15:99675789-99675793	NONHSAT050848
5	lnc-TTC23-4	chr15:99675518-99675781	NONHSAT050848
6	lnc-PGPEP1L-1	chr15:99640583-99640901	XLOC_011607
7	lnc-PGPEP1L-3	chr15:99697436-99701345	ENSG00000259921.1
8	lnc-MEF2A-7	chr15:99848897-99851046	l_1246_chr15:99847899-99851046_liver
9	lnc-PGPEP1L-1	chr15:99640926-99641054	ENSG00000259475.1
10	lnc-PGPEP1L-1	chr15:99645894-99646030	ENSG00000259475.1
11	lnc-MEF2A-6	chr15:99878062-99878686	NONHSAT050865
12	lnc-PGPEP1L-1	chr15:99635728-99635884	XLOC_011607
13	lnc-SYNM-2	chr15:99679522-99681244	ENSG00000261616.1
14	lnc-MEF2A-7	chr15:99847900-99848768	l_1246_chr15:99847899-99851046_liver
15	lnc-PGPEP1L-1	chr15:99635728-99635884	XLOC_011607
16	lnc-SYNM-1	chr15:99638610-99641439	XLOC_011380

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	LRRC28	hsa-miR-34a-5p	chr15:99874260-99874282
2	LRRC28	hsa-miR-34a-5p	chr15:99903350-99903371

Variant related genes	Relation type
ENSG00000264771	TF binding region
ENSG00000261616	TF binding region
LRRC28	TF binding region
ENSG00000259475	TF binding region
HSP90B2P	TF binding region
HNRNPA1P62	TF binding region
ENSG00000268730	TF binding region
SYNM	TF binding region
ENSG00000259921	TF binding region
ENSG00000261054	TF binding region
ENSG00000259257	TF binding region
TTC23	TF binding region
ENSG00000264771	CpG island
ENSG00000261616	CpG island
LRRC28	CpG island
ENSG00000259475	CpG island
HSP90B2P	CpG island
HNRNPA1P62	CpG island
ENSG00000268730	CpG island
SYNM	CpG island
ENSG00000259921	CpG island
ENSG00000261054	CpG island
ENSG00000259257	CpG island
TTC23	CpG island
ENSG00000068305	chromatin interactions
ENSG00000166710	chromatin interactions
ENSG00000177119	chromatin interactions
ENSG00000163874	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000134297	chromatin interactions
ENSG00000259228	chromatin interactions
ENSG00000263053	chromatin interactions
ENSG00000259475	chromatin interactions
ENSG00000261616	chromatin interactions
ENSG00000221511	chromatin interactions
ENSG00000259921	chromatin interactions
ENSG00000240972	chromatin interactions
ENSG00000168904	chromatin interactions
ENSG00000140443	chromatin interactions
ENSG00000197903	chromatin interactions
ENSG00000259706	chromatin interactions
ENSG00000264771	chromatin interactions
ENSG00000184825	chromatin interactions
ENSG00000103852	chromatin interactions
ENSG00000182253	chromatin interactions
ENSG00000233621	chromatin interactions
ENSG00000261054	chromatin interactions
ENSG00000039319	chromatin interactions
ENSG00000229474	chromatin interactions
ENSG00000115685	chromatin interactions
ENSG00000183060	chromatin interactions
ENSG00000115687	chromatin interactions

Extended variants
information (count: 11342 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:11342 , 50 per page) page: 1 2 3 4 5 6 7 ... 227

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4965212	chr15:99629901-99629902	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs139927913	chr15:99629937-99629938	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs185755293	chr15:99629943-99629944	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs72756805	chr15:99629972-99629973	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs565842798	chr15:99629980-99629981	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs536208459	chr15:99629999-99630000	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs191480120	chr15:99630000-99630001	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs143667337	chr15:99630009-99630010	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs182798277	chr15:99630035-99630036	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs146825556	chr15:99630046-99630047	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs556747118	chr15:99630065-99630066	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs568954036	chr15:99630088-99630089	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs558724493	chr15:99630100-99630101	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs577471031	chr15:99630113-99630114	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs200381984	chr15:99630141-99630142	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs150142405	chr15:99630142-99630143	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs537225417	chr15:99630240-99630241	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs553601244	chr15:99630328-99630329	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs556037181	chr15:99630354-99630355	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs115607229	chr15:99630364-99630365	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs187867194	chr15:99630394-99630395	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs35041416	chr15:99630416-99630417	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs368654383	chr15:99630420-99630421	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs200328345	chr15:99630421-99630422	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs201572179	chr15:99630423-99630424	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs563321853	chr15:99630464-99630465	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs575283114	chr15:99630506-99630507	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs545885519	chr15:99630555-99630556	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs150414238	chr15:99630590-99630591	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs192297441	chr15:99630605-99630606	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs1703801	chr15:99630633-99630634	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs547300299	chr15:99630652-99630653	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs183534319	chr15:99630693-99630694	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
34	rs529921448	chr15:99630711-99630712	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs548509383	chr15:99630744-99630745	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs569658066	chr15:99630755-99630756	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs76968956	chr15:99630788-99630789	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs372266205	chr15:99630808-99630809	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs116008621	chr15:99630809-99630810	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs531468546	chr15:99630815-99630816	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs149205175	chr15:99630824-99630825	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs575005377	chr15:99630878-99630879	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs187817439	chr15:99630926-99630927	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs557274852	chr15:99630967-99630968	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs575196075	chr15:99631021-99631022	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs117667219	chr15:99631091-99631092	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs551646432	chr15:99631099-99631100	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs73474398	chr15:99631100-99631101	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs371986222	chr15:99631123-99631124	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs72756806	chr15:99631174-99631175	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:75)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	16864856	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
small cell lung cancer	20016488	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Sudden cardiac death	19188705	CNVD
Intellectual disability	22102821	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Developmental delay	21147756	CNVD
Hepatocellular carcinoma	16750200	CNVD
Central neurocytomas	17123091	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Burkitt''s lymphoma	19759907	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	17133270	CNVD
Myelofibrosis	22110671	CNVD
Mental retardation	20811773	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	21364760	CNVD
Breast cancer	20409316	CNVD
Emphysema	19352772	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Prostate cancer	18632612	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Breast cancer	17142309	CNVD
Williams Syndrome	20824207	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Pancreatic cancer	17952125	CNVD
Aortic dissecting aneurysms	22263138	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Renal cell carcinoma	21215367	CNVD
Schizophrenia	23813976	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:6843 , 50 per page) page: 1 2 3 4 5 6 7 ... 137

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:99628600-99630000	Enhancers	Muscle Satellite Cultured Cells	--
2	chr15:99628800-99630000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr15:99629000-99632400	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr15:99629200-99632000	Enhancers	Skeletal Muscle Male	skeletal muscle
5	chr15:99629400-99631600	Weak transcription	Psoas Muscle	Psoas
6	chr15:99629600-99632600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr15:99629800-99630200	Weak transcription	Fetal Muscle Leg	muscle
8	chr15:99630000-99630200	Enhancers	GM12878-XiMat	blood
9	chr15:99630200-99630800	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr15:99630200-99630800	Enhancers	Fetal Muscle Leg	muscle
11	chr15:99630200-99631200	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr15:99630200-99631400	Enhancers	H1 Cell Line	embryonic stem cell
13	chr15:99630200-99631400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr15:99630200-99631400	Enhancers	Primary B cells from cord blood	blood
15	chr15:99630200-99631400	Flanking Active TSS	GM12878-XiMat	blood
16	chr15:99630200-99632000	Enhancers	Primary B cells from peripheral blood	blood
17	chr15:99630400-99630600	Enhancers	Primary hematopoietic stem cells	blood
18	chr15:99630400-99630800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr15:99630400-99630800	Enhancers	Monocytes-CD14+_RO01746	blood
20	chr15:99630400-99631000	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr15:99630400-99631000	Enhancers	H9 Cell Line	embryonic stem cell
22	chr15:99630400-99631200	Enhancers	HUES48 Cell Line	embryonic stem cell
23	chr15:99630400-99631200	Enhancers	iPS-15b Cell Line	embryonic stem cell
24	chr15:99630400-99631200	Enhancers	Fetal Thymus	thymus
25	chr15:99630400-99631400	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr15:99630400-99631400	Enhancers	Primary monocytes fromperipheralblood	blood
27	chr15:99630400-99631400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
28	chr15:99630400-99631400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr15:99630400-99631600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
30	chr15:99630600-99631200	Enhancers	HUES64 Cell Line	embryonic stem cell
31	chr15:99630800-99631400	Enhancers	Cortex derived primary cultured neurospheres	brain
32	chr15:99630800-99634200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr15:99631200-99631400	Enhancers	Primary hematopoietic stem cells	blood
34	chr15:99631200-99631400	ZNF genes & repeats	Right Atrium	heart
35	chr15:99631200-99633000	Weak transcription	Fetal Thymus	thymus
36	chr15:99631200-99635600	Weak transcription	HUES64 Cell Line	embryonic stem cell
37	chr15:99631400-99631600	Enhancers	GM12878-XiMat	blood
38	chr15:99631400-99635200	Weak transcription	Cortex derived primary cultured neurospheres	brain
39	chr15:99631400-99635600	Weak transcription	HUES6 Cell Line	embryonic stem cell
40	chr15:99631400-99636200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr15:99631400-99640600	Weak transcription	Right Atrium	heart
42	chr15:99631600-99632400	Enhancers	Psoas Muscle	Psoas
43	chr15:99631600-99636000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
44	chr15:99632000-99633000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
45	chr15:99632000-99636800	Weak transcription	Skeletal Muscle Male	skeletal muscle
46	chr15:99632200-99632600	Enhancers	Esophagus	oesophagus
47	chr15:99632200-99633400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr15:99632400-99636600	Weak transcription	Psoas Muscle	Psoas
49	chr15:99632600-99633000	Weak transcription	Esophagus	oesophagus
50	chr15:99632600-99633200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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