Variant report

Variant	nsv571826
Chromosome Location	chr16:32001824-32597694
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3935)
CpG islands
(count:3847)
Chromatin interactive
region (count:1)
LncRNA
region (count:21)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3935 , 50 per page) page: 1 2 3 4 5 6 7 ... 79

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr16:32295698-32295892	HepG2	liver:	n/a	n/a
2	ARID3A	chr16:32345726-32345816	HepG2	liver:	n/a	n/a
3	ARID3A	chr16:32131861-32132041	HepG2	liver:	n/a	n/a
4	ARID3A	chr16:32547652-32548159	K562	blood:	n/a	n/a
5	ARID3A	chr16:32590243-32590613	K562	blood:	n/a	n/a
6	ATF1	chr16:32583782-32583972	K562	blood:	n/a	n/a
7	ATF1	chr16:32550785-32551178	K562	blood:	n/a	n/a
8	ATF1	chr16:32526924-32527721	K562	blood:	n/a	n/a
9	ATF1	chr16:32515726-32516011	K562	blood:	n/a	n/a
10	ATF1	chr16:32559923-32560294	K562	blood:	n/a	n/a
11	ATF1	chr16:32194699-32194908	K562	blood:	n/a	n/a
12	ATF1	chr16:32549843-32550009	K562	blood:	n/a	n/a
13	ATF1	chr16:32558594-32558903	K562	blood:	n/a	n/a
14	ATF1	chr16:32568174-32568349	K562	blood:	n/a	n/a
15	ATF1	chr16:32547497-32547620	K562	blood:	n/a	n/a
16	ATF1	chr16:32363593-32363793	K562	blood:	n/a	n/a
17	ATF1	chr16:32521319-32521519	K562	blood:	n/a	n/a
18	BACH1	chr16:32531668-32531907	K562	blood:	n/a	n/a
19	BACH1	chr16:32590237-32590618	K562	blood:	n/a	n/a
20	BACH1	chr16:32553830-32554374	K562	blood:	n/a	n/a
21	BATF	chr16:32366962-32367454	GM12878	blood:	n/a	chr16:32367243-32367254
22	BATF	chr16:32144482-32144672	GM12878	blood:	n/a	n/a
23	BATF	chr16:32102790-32103063	GM12878	blood:	n/a	n/a
24	BATF	chr16:32373029-32373235	GM12878	blood:	n/a	n/a
25	BATF	chr16:32059238-32059578	GM12878	blood:	n/a	n/a
26	BATF	chr16:32101090-32101595	GM12878	blood:	n/a	chr16:32101437-32101448
27	BATF	chr16:32148154-32148425	GM12878	blood:	n/a	n/a
28	BATF	chr16:32451259-32451478	GM12878	blood:	n/a	n/a
29	BATF	chr16:32361068-32361342	GM12878	blood:	n/a	n/a
30	BATF	chr16:32059227-32059446	GM12878	blood:	n/a	n/a
31	BATF	chr16:32368414-32368848	GM12878	blood:	n/a	n/a
32	BATF	chr16:32368458-32368823	GM12878	blood:	n/a	n/a
33	BATF	chr16:32139079-32139319	GM12878	blood:	n/a	n/a
34	BATF	chr16:32050371-32050791	GM12878	blood:	n/a	n/a
35	BATF	chr16:32099023-32099501	GM12878	blood:	n/a	n/a
36	BATF	chr16:32007628-32007992	GM12878	blood:	n/a	n/a
37	BATF	chr16:32098574-32098849	GM12878	blood:	n/a	n/a
38	BATF	chr16:32102770-32103216	GM12878	blood:	n/a	n/a
39	BATF	chr16:32144456-32144674	GM12878	blood:	n/a	n/a
40	BATF	chr16:32335083-32335294	GM12878	blood:	n/a	n/a
41	BATF	chr16:32150053-32150293	GM12878	blood:	n/a	n/a
42	BATF	chr16:32333643-32333817	GM12878	blood:	n/a	n/a
43	BATF	chr16:32133941-32134130	GM12878	blood:	n/a	n/a
44	BATF	chr16:32335047-32335307	GM12878	blood:	n/a	n/a
45	BATF	chr16:32099644-32100206	GM12878	blood:	n/a	n/a
46	BATF	chr16:32435147-32435451	GM12878	blood:	n/a	n/a
47	BATF	chr16:32101215-32101624	GM12878	blood:	n/a	chr16:32101437-32101448
48	BATF	chr16:32099142-32100510	GM12878	blood:	n/a	n/a
49	BATF	chr16:32140974-32141195	GM12878	blood:	n/a	n/a
50	BATF	chr16:32108268-32108476	GM12878	blood:	n/a	n/a

(count:3847 , 50 per page) page: 1 2 3 4 5 6 7 ... 77

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr16:32264389-32264439	AG04450	lung:	fetal
2	chr16:32288799-32288849	HRE	kidney:	n/a
3	chr16:32486334-32486384	IMR90	lung:	fetal
4	chr16:32323497-32323547	NB4	blood:	n/a
5	chr16:32264389-32264439	AG04450	lung:	fetal
6	chr16:32288799-32288849	HRE	kidney:	n/a
7	chr16:32486334-32486384	IMR90	lung:	fetal
8	chr16:32323497-32323547	NB4	blood:	n/a
9	chr16:32130303-32130353	BE2_C	brain:	n/a
10	chr16:32201912-32201962	HEK293	kidney:	embryo
11	chr16:32095405-32095455	HUVEC	blood vessel:	n/a
12	chr16:32290371-32290421	MCF-7	breast:	n/a
13	chr16:32265041-32265091	GM12878	blood:	n/a
14	chr16:32330265-32330315	Caco-2	colon:	n/a
15	chr16:32493059-32493109	NHBE	bronchial:	n/a
16	chr16:32355981-32356031	K562	blood:	n/a
17	chr16:32487825-32487875	SK-N-MC	brain:	n/a
18	chr16:32288799-32288849	BE2_C	brain:	n/a
19	chr16:32360428-32360478	Hela-S3	cervix:	n/a
20	chr16:32130303-32130353	GM19239	blood:	n/a
21	chr16:32330302-32330352	ProgFib	skin:	n/a
22	chr16:32473096-32473146	HL-60	blood:	n/a
23	chr16:32452502-32452552	HEEpiC	esophagus:	n/a
24	chr16:32265747-32265797	AG04450	lung:	fetal
25	chr16:32289928-32289978	HRPEpiC	eye:	n/a
26	chr16:32165153-32165203	A549	lung:	n/a
27	chr16:32288799-32288849	K562	blood:	n/a
28	chr16:32360428-32360478	ovcar-3	ovarian:	n/a
29	chr16:32165225-32165275	RPTEC	kidney:	n/a
30	chr16:32489820-32489870	GM12878	blood:	n/a
31	chr16:32473096-32473146	HCPEpiC	choroid plexus:	n/a
32	chr16:32037687-32037737	SK-N-SH_RA	brain:	n/a
33	chr16:32127656-32127706	GM12892	blood:	n/a
34	chr16:32254800-32254850	ECC-1	luminal epithelium:	n/a
35	chr16:32363978-32364028	IMR90	lung:	fetal
36	chr16:32360428-32360478	HPAEpiC	pulmonary alveolar:	n/a
37	chr16:32493059-32493109	HCM	heart:	n/a
38	chr16:32289757-32289807	SK-N-SH	brain:	n/a
39	chr16:32452725-32452775	HepG2	liver:	n/a
40	chr16:32452502-32452552	HPAEpiC	pulmonary alveolar:	n/a
41	chr16:32096623-32096673	HCT-116	colon:	n/a
42	chr16:32486334-32486384	HEEpiC	esophagus:	n/a
43	chr16:32252365-32252415	SAEC	small airway:	n/a
44	chr16:32127656-32127706	AG10803	skin:	n/a
45	chr16:32252787-32252837	HCT-116	colon:	n/a
46	chr16:32360428-32360478	RPTEC	kidney:	n/a
47	chr16:32264389-32264439	AG09309	skin:	n/a
48	chr16:32330302-32330352	U87	brain:	n/a
49	chr16:32323497-32323547	A549	lung:	n/a
50	chr16:32254800-32254850	A549	lung:	n/a

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:106598214..106598843-chr16:32050606..32051126,2	MCF-7	breast:

(count:21 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC133485.1.1-8	chr16:32443002-32443139	NONHSAT142015
2	lnc-TP53TG3-4	chr16:32274229-32274612	ENSG00000260402.1
3	lnc-TP53TG3-3	chr16:32335100-32335382	XLOC_011921
4	lnc-AC133485.1.1-7	chr16:32200583-32200802	NONHSAT141994
5	lnc-AC133485.1.1-8	chr16:32416298-32416473	NONHSAT142015
6	lnc-TP53TG3-16	chr16:32450390-32451887	NONHSAT142016
7	lnc-AC133485.1.1-8	chr16:32437097-32437203	NONHSAT142015
8	lnc-TP53TG3-7	chr16:32265674-32265743	ENSG00000260575.1
9	lnc-AC133485.1.1-8	chr16:32442004-32442108	NONHSAT142015
10	lnc-AC133485.1.1-1	chr16:32204071-32204851	ENSG00000260847.1
11	lnc-TP53TG3-7	chr16:32261941-32262132	ENSG00000260575.1
12	lnc-AC133485.1.1-8	chr16:32438035-32438184	NONHSAT142015
13	lnc-TP53TG3-4	chr16:32275068-32275108	ENSG00000260402.1
14	lnc-AC133485.1.1-8	chr16:32399456-32399634	NONHSAT142015
15	lnc-AC133485.1.1-1	chr16:32199654-32199738	ENSG00000260847.1
16	lnc-TP53TG3-2	chr16:32465933-32470079	ENSG00000261541.1
17	lnc-AC133485.1.1-8	chr16:32403379-32403556	NONHSAT142015
18	lnc-TP53TG3-3	chr16:32334099-32334218	XLOC_011921
19	lnc-TP53TG3-16	chr16:32452294-32452480	NONHSAT142016
20	lnc-AC133485.1.1-8	chr16:32402131-32402273	NONHSAT142015
21	lnc-AC133485.1.1-8	chr16:32447309-32447521	NONHSAT142015

No data

Variant related genes	Relation type
ENSG00000260540	TF binding region
ENSG00000261541	TF binding region
ENSG00000260402	TF binding region
ENSG00000260662	TF binding region
ENSG00000260575	TF binding region
ENSG00000259822	TF binding region
HERC2P4	TF binding region
ENSG00000223931	TF binding region
ENSG00000260628	TF binding region
ENSG00000260344	TF binding region
TP53TG3D	TF binding region
ENSG00000260584	TF binding region
ENSG00000261127	TF binding region
IGHV1OR16-1	TF binding region
ENSG00000260649	TF binding region
IGHV3OR16-9	TF binding region
ACTR3BP3	TF binding region
ENSG00000260847	TF binding region
ENSG00000261727	TF binding region
ENSG00000260866	TF binding region
IGHV1OR16-3	TF binding region
ABCD1P3	TF binding region
PABPC1P13	TF binding region
ENSG00000260516	TF binding region
ENSG00000260540	CpG island
ENSG00000261541	CpG island
ENSG00000260402	CpG island
ENSG00000260662	CpG island
ENSG00000260575	CpG island
ENSG00000259822	CpG island
HERC2P4	CpG island
ENSG00000223931	CpG island
ENSG00000260628	CpG island
ENSG00000260344	CpG island
TP53TG3D	CpG island
ENSG00000260584	CpG island
ENSG00000261127	CpG island
IGHV1OR16-1	CpG island
ENSG00000260649	CpG island
IGHV3OR16-9	CpG island
ACTR3BP3	CpG island
ENSG00000260847	CpG island
ENSG00000261727	CpG island
ENSG00000260866	CpG island
IGHV1OR16-3	CpG island
ABCD1P3	CpG island
PABPC1P13	CpG island
ENSG00000260516	CpG island
LBR	miRNA target sites

Extended variants
information (count: 12243 )
Associated
traits (count: 139 )

Variant overlapped rSNPs/rCNVs (count:12243 , 50 per page) page: 1 2 3 4 5 6 7 ... 245

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2966274	chr16:32001824-32001825	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs552937590	chr16:32001842-32001843	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs577654022	chr16:32001893-32001894	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs372613595	chr16:32001914-32001915	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs190603504	chr16:32001922-32001923	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs575329927	chr16:32001924-32001925	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs11150658	chr16:32001932-32001933	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs542680144	chr16:32001954-32001955	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs58477186	chr16:32002015-32002016	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs528842880	chr16:32002147-32002148	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs374258420	chr16:32002184-32002185	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs181072153	chr16:32002475-32002476	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs530020395	chr16:32002478-32002479	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs144361633	chr16:32002480-32002481	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs567218206	chr16:32002481-32002482	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs534638590	chr16:32002488-32002489	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs546730675	chr16:32002490-32002491	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs146120985	chr16:32002501-32002502	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs538696018	chr16:32002502-32002503	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs556767495	chr16:32002524-32002525	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs371222915	chr16:32002565-32002566	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs184380906	chr16:32002585-32002586	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs140154921	chr16:32002612-32002613	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs554647450	chr16:32002620-32002621	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs573537962	chr16:32002621-32002622	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs540573636	chr16:32002638-32002639	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs565448136	chr16:32002653-32002654	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs2939835	chr16:32002671-32002672	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs562098476	chr16:32002683-32002684	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs189738904	chr16:32002806-32002807	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs143880642	chr16:32002807-32002808	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs62055244	chr16:32002821-32002822	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs62055245	chr16:32002836-32002837	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs555244006	chr16:32005374-32005375	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs533622225	chr16:32005379-32005380	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs570427968	chr16:32005455-32005456	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs538125611	chr16:32005478-32005479	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs556427319	chr16:32005499-32005500	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs568444564	chr16:32005511-32005512	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs535652807	chr16:32005533-32005534	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs553988385	chr16:32005572-32005573	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs572409439	chr16:32005598-32005599	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs539926119	chr16:32005640-32005641	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs557840296	chr16:32005655-32005656	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs187376283	chr16:32005659-32005660	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs112618989	chr16:32005680-32005681	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs574832382	chr16:32005815-32005816	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs146081593	chr16:32005816-32005817	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs542035948	chr16:32005826-32005827	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs560302193	chr16:32005866-32005867	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:139)

Disease	PMID	Source
Hodgkin''s lymphoma	20651079	CNVD
Metanephric adenoma	20802469	CNVD
Melanoma	18172304	CNVD
Breast cancer	16608533	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Autism	22566537	CNVD
Intellectual disability	22566537	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Ductal carcinoma	22052326	CNVD
Breast cancer	21509527	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21858162	CNVD
Hepatocellular carcinoma	16750200	CNVD
Mental retardation	19951919	CNVD
Colorectal cancer	16272173	CNVD
Bladder cancer	21909424	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21785460	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Myelofibrosis	22110671	CNVD
Epilepsy	22499536	CNVD
Attention deficit hyperactivity disorder	21324949	CNVD
Austim spectrum disorder	21302340	CNVD
Autism	22513405	CNVD
Autism	22958593	CNVD
Autism	18184952	CNVD
Autism	19966786	CNVD
Autism	21394203	CNVD
Autism	21969575	CNVD
Autism	22241247	CNVD
Autism	20970697	CNVD
Autism	20942916	CNVD
Epilepsy	20970697	CNVD
Intellectual disability	22045946	CNVD
Mental retardation	19966786	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Autism	18923514	CNVD
Obesity	21881559	CNVD
Obesity	21956041	CNVD
Autism	20659124	CNVD
Mental retardation	21062444	CNVD
Schizophrenia	20587603	CNVD
Schizophrenia	21285140	CNVD
Schizophrenia	22885689	CNVD
Schizophrenia	20553308	CNVD
Schizophrenia	20970697	CNVD
Schizophrenia	20433910	CNVD
Schizophrenia	22241247	CNVD
Autism	19242545	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Intracranial ependymoma	16609018	CNVD
Schizophrenia	21399695	CNVD
Autism	21956041	CNVD
Disorders of sex development	21048976	CNVD
Autism	22067053	CNVD
Autism	18156158	CNVD
Mental retardation	20152051	CNVD
Autism	19218893	CNVD
Autism	21289514	CNVD
Schizophrenia	19855392	CNVD
neurodevelopmental Syndrome	20503337	CNVD
Benign familial neonatal-infantile seizures	21060786	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Cancer	21183584	CNVD
Low-grade fibromyxoid sarcoma	21536545	CNVD
Breast cancer	21045282	CNVD
Neuroblastoma	20406844	CNVD
Autism	19050728	CNVD
Epilepsy	20923578	CNVD
Psychiatric disorder	19050728	CNVD
Schizophrenia	19348701	CNVD
Attention deficit hyperactivity disorder	19097825	CNVD
Autism	20964600	CNVD
Schizophrenia	19955444	CNVD
Schizophrenia	18990708	CNVD
Schizophrenia	19571808	CNVD
Breast cancer	20409316	CNVD
Severe combined immunodeficiency	19097825	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Autism	18522746	CNVD
Sezary syndrome	18413736	CNVD
Wilms tumour	21544195	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Cancer	20164920	CNVD
Autism	19287141	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	20967226	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Melanoma	20877625	CNVD
Breast cancer	17142309	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22297974	CNVD
Recurrent pregnancy loss	19789632	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Glioma	20126413	CNVD
Osteosarcoma	21215367	CNVD
Autism	21865298	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD

Chromatin state (count:532 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:32002400-32002800	Enhancers	HepG2	liver
2	chr16:32051200-32051600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
3	chr16:32051400-32051600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr16:32051400-32051600	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr16:32077600-32078000	Enhancers	Dnd41	blood
6	chr16:32095200-32095400	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
7	chr16:32095400-32096400	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
8	chr16:32096000-32096200	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
9	chr16:32096000-32096200	Active TSS	Primary T regulatory cells fromperipheralblood	blood
10	chr16:32096200-32096400	Flanking Bivalent TSS/Enh	Primary B cells from peripheral blood	blood
11	chr16:32096200-32096400	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
12	chr16:32096200-32096400	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
13	chr16:32096200-32096600	Flanking Bivalent TSS/Enh	Placenta	Placenta
14	chr16:32096200-32096800	Active TSS	Primary T helper cells fromperipheralblood	blood
15	chr16:32096200-32096800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr16:32096200-32097000	Bivalent/Poised TSS	Primary T helper cells PMA-I stimulated	--
17	chr16:32096200-32097200	Active TSS	Primary T cells from cord blood	blood
18	chr16:32096200-32097200	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
19	chr16:32096200-32097200	Active TSS	Primary T helper naive cells fromperipheralblood	blood
20	chr16:32096200-32097200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr16:32096200-32097200	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
22	chr16:32096200-32097400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
23	chr16:32096200-32097400	Active TSS	Right Atrium	heart
24	chr16:32096200-32097400	Bivalent/Poised TSS	A549	lung
25	chr16:32096200-32097400	Active TSS	Osteobl	bone
26	chr16:32096400-32096600	Flanking Bivalent TSS/Enh	Primary monocytes fromperipheralblood	blood
27	chr16:32096400-32096600	Flanking Bivalent TSS/Enh	Primary Natural Killer cells fromperipheralblood	blood
28	chr16:32096400-32096600	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
29	chr16:32096400-32096800	Bivalent/Poised TSS	Primary B cells from peripheral blood	blood
30	chr16:32096400-32096800	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
31	chr16:32096400-32096800	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
32	chr16:32096400-32096800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
33	chr16:32096400-32096800	ZNF genes & repeats	Right Ventricle	heart
34	chr16:32096400-32096800	Active TSS	HSMM	muscle
35	chr16:32096400-32097000	Bivalent Enhancer	Fetal Muscle Leg	muscle
36	chr16:32096400-32097200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr16:32096400-32097200	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr16:32096400-32097200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr16:32096400-32097200	Active TSS	Rectal Smooth Muscle	rectum
40	chr16:32096400-32097400	Bivalent/Poised TSS	Primary T regulatory cells fromperipheralblood	blood
41	chr16:32096400-32097600	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr16:32096600-32096800	Bivalent Enhancer	Placenta	Placenta
43	chr16:32096600-32097000	Bivalent/Poised TSS	Primary monocytes fromperipheralblood	blood
44	chr16:32096600-32097000	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
45	chr16:32096600-32097200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr16:32096800-32097000	Flanking Bivalent TSS/Enh	Primary T helper cells fromperipheralblood	blood
47	chr16:32096800-32097000	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr16:32096800-32097000	Bivalent Enhancer	Dnd41	blood
49	chr16:32096800-32097200	Flanking Bivalent TSS/Enh	Primary B cells from peripheral blood	blood
50	chr16:32096800-32097200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links