Variant report
Variant | nsv572221 |
---|---|
Chromosome Location | chr16:33366281-33796895 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:3291)
- CpG islands (count:1954)
- Chromatin interactive region (count:23)
- LncRNA region (count:17)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr16:33577202-33577382 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr16:33502987-33503033 | HepG2 | liver: | n/a | n/a |
3 | ATF1 | chr16:33446622-33446661 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr16:33535249-33535260 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr16:33544959-33544976 | K562 | blood: | n/a | n/a |
6 | ATF3 | chr16:33569376-33569681 | K562 | blood: | n/a | n/a |
7 | ATF3 | chr16:33569464-33569595 | GM12878 | blood: | n/a | n/a |
8 | ATF3 | chr16:33619018-33619453 | K562 | blood: | n/a | n/a |
9 | ATF3 | chr16:33764110-33764276 | K562 | blood: | n/a | n/a |
10 | BATF | chr16:33448828-33449178 | GM12878 | blood: | n/a | chr16:33449053-33449063 |
11 | BATF | chr16:33369625-33369914 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr16:33517629-33517889 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr16:33446462-33446750 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr16:33716043-33716353 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr16:33431441-33431744 | GM12878 | blood: | n/a | chr16:33431606-33431617 |
16 | BATF | chr16:33521180-33521433 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr16:33563865-33564062 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr16:33647061-33647311 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr16:33673521-33673717 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr16:33722423-33722618 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr16:33370078-33370545 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr16:33524553-33524907 | GM12878 | blood: | n/a | chr16:33524743-33524752 |
23 | BATF | chr16:33445892-33446115 | GM12878 | blood: | n/a | chr16:33445964-33445975 chr16:33445982-33445990 |
24 | BATF | chr16:33564248-33564454 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr16:33763898-33764246 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr16:33458798-33459290 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr16:33448799-33449188 | GM12878 | blood: | n/a | chr16:33449053-33449063 |
28 | BATF | chr16:33521242-33521484 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr16:33589201-33589438 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr16:33585762-33586003 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr16:33445748-33446186 | GM12878 | blood: | n/a | chr16:33445964-33445975 chr16:33445982-33445990 |
32 | BATF | chr16:33524710-33524926 | GM12878 | blood: | n/a | chr16:33524743-33524752 |
33 | BATF | chr16:33431461-33431755 | GM12878 | blood: | n/a | chr16:33431606-33431617 |
34 | BATF | chr16:33517619-33517865 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr16:33521194-33521489 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr16:33460174-33460528 | GM12878 | blood: | n/a | chr16:33460375-33460384 |
37 | BCL11A | chr16:33446218-33446393 | GM12878 | blood: | n/a | n/a |
38 | BCL11A | chr16:33524561-33524846 | GM12878 | blood: | n/a | n/a |
39 | BCL11A | chr16:33763969-33764256 | GM12878 | blood: | n/a | n/a |
40 | BCL11A | chr16:33366862-33367059 | GM12878 | blood: | n/a | n/a |
41 | BCL11A | chr16:33664436-33664652 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr16:33448833-33449216 | GM12878 | blood: | n/a | chr16:33449056-33449065 chr16:33449055-33449064 |
43 | BCL11A | chr16:33518137-33518397 | GM12878 | blood: | n/a | n/a |
44 | BCL11A | chr16:33647047-33647229 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr16:33521254-33521467 | GM12878 | blood: | n/a | n/a |
46 | BCL11A | chr16:33585333-33585647 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr16:33431491-33431778 | GM12878 | blood: | n/a | n/a |
48 | BCL11A | chr16:33493442-33493790 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr16:33492453-33492646 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr16:33582517-33582748 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr16:33574151-33574201 | HUVEC | blood vessel: | n/a |
2 | chr16:33730720-33730770 | PrEC | prostate: | n/a |
3 | chr16:33574151-33574201 | HUVEC | blood vessel: | n/a |
4 | chr16:33730720-33730770 | PrEC | prostate: | n/a |
5 | chr16:33781365-33781415 | Jurkat | blood: | n/a |
6 | chr16:33483244-33483294 | HAEpiC | amniotic membrane: | n/a |
7 | chr16:33483297-33483347 | GM06990 | blood: | n/a |
8 | chr16:33570021-33570071 | GM19239 | blood: | n/a |
9 | chr16:33783802-33783852 | HRCEpiC | kidney: | n/a |
10 | chr16:33573272-33573322 | AG09309 | skin: | n/a |
11 | chr16:33730558-33730608 | IMR90 | lung: | fetal |
12 | chr16:33510089-33510139 | ProgFib | skin: | n/a |
13 | chr16:33776910-33776960 | Hepatocyte | liver: | n/a |
14 | chr16:33605185-33605235 | U87 | brain: | n/a |
15 | chr16:33730720-33730770 | NH-A | brain: | n/a |
16 | chr16:33374131-33374181 | HepG2 | liver: | n/a |
17 | chr16:33483244-33483294 | AG04450 | lung: | fetal |
18 | chr16:33374131-33374181 | GM19239 | blood: | n/a |
19 | chr16:33776910-33776960 | AG09309 | skin: | n/a |
20 | chr16:33734837-33734887 | LNCaP | prostate: | n/a |
21 | chr16:33510089-33510139 | HL-60 | blood: | n/a |
22 | chr16:33730558-33730608 | Hela-S3 | cervix: | n/a |
23 | chr16:33730558-33730608 | HPAEpiC | pulmonary alveolar: | n/a |
24 | chr16:33573272-33573322 | HEEpiC | esophagus: | n/a |
25 | chr16:33481620-33481670 | CMK | blood: | n/a |
26 | chr16:33570115-33570165 | GM12878 | blood: | n/a |
27 | chr16:33574151-33574201 | NH-A | brain: | n/a |
28 | chr16:33483299-33483349 | NH-A | brain: | n/a |
29 | chr16:33573272-33573322 | Jurkat | blood: | n/a |
30 | chr16:33509523-33509573 | CMK | blood: | n/a |
31 | chr16:33509433-33509483 | GM12878 | blood: | n/a |
32 | chr16:33730720-33730770 | BE2_C | brain: | n/a |
33 | chr16:33574151-33574201 | A549 | lung: | n/a |
34 | chr16:33732255-33732305 | HCPEpiC | choroid plexus: | n/a |
35 | chr16:33374161-33374211 | H1-hESC | embryonic stem cell: | embryo |
36 | chr16:33730539-33730589 | MCF10A-Er-Src | breast: | n/a |
37 | chr16:33509433-33509483 | HCF | heart: | n/a |
38 | chr16:33604228-33604278 | RPTEC | kidney: | n/a |
39 | chr16:33573857-33573907 | MCF-7 | breast: | n/a |
40 | chr16:33374161-33374211 | GM12878 | blood: | n/a |
41 | chr16:33730539-33730589 | NT2-D1 | testis: | n/a |
42 | chr16:33734837-33734887 | ovcar-3 | ovarian: | n/a |
43 | chr16:33374131-33374181 | AG04449 | skin: | fetal |
44 | chr16:33570115-33570165 | GM12891 | blood: | n/a |
45 | chr16:33730558-33730608 | RPTEC | kidney: | n/a |
46 | chr16:33570115-33570165 | SKMC | muscle: | n/a |
47 | chr16:33509433-33509483 | PrEC | prostate: | n/a |
48 | chr16:33487438-33487488 | T-47D | breast: | n/a |
49 | chr16:33510089-33510139 | NHDF-neo | bronchial: | n/a |
50 | chr16:33605185-33605235 | Hepatocyte | liver: | n/a |
(count:23 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr16:33374454..33377112-chr16:33390580..33392185,2 | MCF-7 | breast: | |
2 | chr16:33618632..33619607-chr16:33646788..33647301,2 | MCF-7 | breast: | |
3 | chr16:33501621..33504383-chr16:33506713..33508666,2 | K562 | blood: | |
4 | chr16:33618559..33619759-chr16:33646461..33647717,8 | MCF-7 | breast: | |
5 | chr16:33374454..33377112-chr16:33390580..33392185,2 | MCF-7 | breast: | |
6 | chr1:121484857..121485377-chr16:33618718..33619247,2 | MCF-7 | breast: | |
7 | chr16:33501621..33504383-chr16:33506713..33508666,2 | K562 | blood: | |
8 | chr16:32876653..32877208-chr16:33618895..33619446,2 | MCF-7 | breast: | |
9 | chr16:32951293..32951850-chr16:33618657..33619267,2 | MCF-7 | breast: | |
10 | chr16:33618687..33619546-chr21:22589708..22590404,2 | MCF-7 | breast: | |
11 | chr13:30046484..30047067-chr16:33618956..33619795,2 | MCF-7 | breast: | |
12 | chr16:33535568..33538409-chr16:33539107..33541473,2 | K562 | blood: | |
13 | chr16:33599590..33601128-chr16:33607194..33610110,2 | K562 | blood: | |
14 | chr14:107287133..107287781-chr16:33618600..33619120,3 | MCF-7 | breast: | |
15 | chr16:33599590..33601128-chr16:33607194..33610110,2 | K562 | blood: | |
16 | chr16:33618632..33619607-chr16:33646788..33647301,2 | MCF-7 | breast: | |
17 | chr12:123886567..123888097-chr16:33420189..33423186,2 | K562 | blood: | |
18 | chr16:32993835..32994354-chr16:33619041..33619624,2 | MCF-7 | breast: | |
19 | chr16:33618887..33619679-chr16:33739842..33740784,2 | MCF-7 | breast: | |
20 | chr16:33535568..33538409-chr16:33539107..33541473,2 | K562 | blood: | |
21 | chr16:33618887..33619679-chr16:33739842..33740784,2 | MCF-7 | breast: | |
22 | chr16:33618869..33619686-chr16:33955996..33956882,3 | MCF-7 | breast: | |
23 | chr16:33618975..33619481-chr6:120699536..120700074,2 | MCF-7 | breast: |
(count:17 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-AC140658.1-6 | chr16:33776448-33776670 | ENSG00000205452.4 |
2 | lnc-AC140658.1-3 | chr16:33750745-33751015 | NONHSAT142117 |
3 | lnc-AC140658.1-6 | chr16:33777320-33777532 | ENSG00000205452.4 |
4 | lnc-AC140658.1-5 | chr16:33768513-33768558 | NONHSAT142119 |
5 | lnc-AC140658.1-5 | chr16:33768122-33768427 | NONHSAT142119 |
6 | lnc-AC140658.1-6 | chr16:33775379-33776670 | ENSG00000205452.4 |
7 | lnc-AC136428.1.1-1 | chr16:33661001-33661077 | ENSG00000260312.1 |
8 | lnc-AC136428.1.1-1 | chr16:33661251-33661331 | ENSG00000260312.1 |
9 | lnc-AC140658.1-6 | chr16:33777235-33777744 | ENSG00000205452.4 |
10 | lnc-AC140658.1-6 | chr16:33778750-33778813 | ENSG00000205452.4 |
11 | lnc-AC136428.1.1-10 | chr16:33677506-33677808 | NONHSAT142113 |
12 | lnc-AC140658.1-6 | chr16:33776833-33776957 | ENSG00000205452.4 |
13 | lnc-AC140658.1-6 | chr16:33775514-33776189 | ENSG00000205452.4 |
14 | lnc-AC140658.1-6 | chr16:33777416-33777550 | ENSG00000205452.4 |
15 | lnc-AC136428.1.1-10 | chr16:33677891-33677935 | NONHSAT142113 |
16 | lnc-AC136428.1.1-1 | chr16:33660402-33660589 | ENSG00000260312.1 |
17 | lnc-AC140658.1-6 | chr16:33776476-33776670 | ENSG00000205452.4 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000205452 | TF binding region |
ENSG00000260525 | TF binding region |
IGHV3OR16-16 | TF binding region |
ENSG00000261153 | TF binding region |
ENSG00000259680 | TF binding region |
ENSG00000260312 | TF binding region |
ENSG00000263277 | TF binding region |
ENSG00000261405 | TF binding region |
IGHV3OR16-13 | TF binding region |
ENPP7P13 | TF binding region |
ENSG00000198555 | TF binding region |
ENSG00000261607 | TF binding region |
IGHV3OR16-12 | TF binding region |
ENSG00000259882 | TF binding region |
ENSG00000270401 | TF binding region |
ENSG00000260308 | TF binding region |
ENSG00000261217 | TF binding region |
IGHV3OR16-11 | TF binding region |
IGHV3OR16-7 | TF binding region |
ENSG00000271691 | TF binding region |
ENSG00000270924 | TF binding region |
ARHGAP23P1 | TF binding region |
BMS1P8 | TF binding region |
ENSG00000205452 | CpG island |
ENSG00000260525 | CpG island |
IGHV3OR16-16 | CpG island |
ENSG00000261153 | CpG island |
ENSG00000259680 | CpG island |
ENSG00000260312 | CpG island |
ENSG00000263277 | CpG island |
ENSG00000261405 | CpG island |
IGHV3OR16-13 | CpG island |
ENPP7P13 | CpG island |
ENSG00000198555 | CpG island |
ENSG00000261607 | CpG island |
IGHV3OR16-12 | CpG island |
ENSG00000259882 | CpG island |
ENSG00000270401 | CpG island |
ENSG00000260308 | CpG island |
ENSG00000261217 | CpG island |
IGHV3OR16-11 | CpG island |
IGHV3OR16-7 | CpG island |
ENSG00000271691 | CpG island |
ENSG00000270924 | CpG island |
ARHGAP23P1 | CpG island |
BMS1P8 | CpG island |
ENSG00000259680 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs2129699 | chr16:33366281-33366282 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs568766770 | chr16:33366283-33366284 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs535429566 | chr16:33366285-33366286 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs553846494 | chr16:33366291-33366292 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs565730949 | chr16:33366296-33366297 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs539546375 | chr16:33366303-33366304 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs372935746 | chr16:33366322-33366323 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs557897223 | chr16:33366338-33366339 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs576177644 | chr16:33366340-33366341 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs543630154 | chr16:33366360-33366361 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs555357775 | chr16:33366364-33366365 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs376654394 | chr16:33366413-33366414 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs139447151 | chr16:33366414-33366415 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs560119165 | chr16:33366426-33366427 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs376005119 | chr16:33366429-33366430 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs527740849 | chr16:33366435-33366436 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs545910111 | chr16:33366442-33366443 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs564677206 | chr16:33366453-33366454 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs201340609 | chr16:33366461-33366462 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs550386510 | chr16:33366498-33366499 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs148614070 | chr16:33366516-33366517 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs529614425 | chr16:33366521-33366522 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs547374512 | chr16:33366579-33366580 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs565693740 | chr16:33366598-33366599 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs539510810 | chr16:33366599-33366600 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs55897768 | chr16:33366647-33366648 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
27 | rs59819998 | chr16:33366649-33366650 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs74015317 | chr16:33366674-33366675 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs74015318 | chr16:33366683-33366684 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs569765675 | chr16:33366691-33366692 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs536844708 | chr16:33366750-33366751 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs370087034 | chr16:33366751-33366752 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs573553081 | chr16:33366771-33366772 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs534613440 | chr16:33366813-33366814 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs553716684 | chr16:33366822-33366823 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs572130565 | chr16:33366895-33366896 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs199624115 | chr16:33366914-33366915 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs546208554 | chr16:33366925-33366926 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs12162064 | chr16:33366928-33366929 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs564411156 | chr16:33366948-33366949 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs576523961 | chr16:33366951-33366952 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs530942592 | chr16:33366967-33366968 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs543602841 | chr16:33366971-33366972 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
44 | rs562315390 | chr16:33367050-33367051 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
45 | rs375163687 | chr16:33367060-33367061 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs529575050 | chr16:33367063-33367064 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs548129416 | chr16:33367064-33367065 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs369660347 | chr16:33367077-33367078 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs560115783 | chr16:33367117-33367118 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs532941594 | chr16:33367132-33367133 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 20651079 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Melanoma | 18172304 | CNVD |
Breast cancer | 16608533 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Breast cancer | 17133270 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Lung adenocarcinoma | 17086460 | CNVD |
Lung cancer | 17086460 | CNVD |
Autism | 22566537 | CNVD |
Intellectual disability | 22566537 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 17603634 | CNVD |
Breast cancer | 21264507 | CNVD |
Cervical cancer | 21063398 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Autism | 19415332 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Schizophrenia | 22958593 | CNVD |
Ductal carcinoma | 22052326 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Breast cancer | 21858162 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Mental retardation | 19951919 | CNVD |
Colorectal cancer | 16272173 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21785460 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Breast cancer | 21990379 | CNVD |
Astrocytoma | 22246337 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Epilepsy | 22499536 | CNVD |
Attention deficit hyperactivity disorder | 21324949 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 22513405 | CNVD |
Autism | 22958593 | CNVD |
Autism | 18184952 | CNVD |
Autism | 19966786 | CNVD |
Autism | 21394203 | CNVD |
Autism | 21969575 | CNVD |
Autism | 22241247 | CNVD |
Autism | 20970697 | CNVD |
Autism | 20942916 | CNVD |
Epilepsy | 20970697 | CNVD |
Intellectual disability | 22045946 | CNVD |
Mental retardation | 19966786 | CNVD |
Developmental delay | 20808231 | CNVD |
Obesity | 20808231 | CNVD |
Autism | 18923514 | CNVD |
Obesity | 21881559 | CNVD |
Obesity | 21956041 | CNVD |
Autism | 20659124 | CNVD |
Mental retardation | 21062444 | CNVD |
Schizophrenia | 20587603 | CNVD |
Schizophrenia | 21285140 | CNVD |
Schizophrenia | 22885689 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 20970697 | CNVD |
Schizophrenia | 20433910 | CNVD |
Schizophrenia | 22241247 | CNVD |
Autism | 19242545 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Intracranial ependymoma | 16609018 | CNVD |
Schizophrenia | 21399695 | CNVD |
Autism | 21956041 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Autism | 22067053 | CNVD |
Autism | 18156158 | CNVD |
Mental retardation | 20152051 | CNVD |
Autism | 19218893 | CNVD |
Autism | 21289514 | CNVD |
Schizophrenia | 19855392 | CNVD |
neurodevelopmental Syndrome | 20503337 | CNVD |
Benign familial neonatal-infantile seizures | 21060786 | CNVD |
Low-grade fibromyxoid sarcoma | 0 | CNVD |
Cancer | 21183584 | CNVD |
Low-grade fibromyxoid sarcoma | 21536545 | CNVD |
Breast cancer | 21045282 | CNVD |
Neuroblastoma | 20406844 | CNVD |
Autism | 19050728 | CNVD |
Epilepsy | 20923578 | CNVD |
Psychiatric disorder | 19050728 | CNVD |
Schizophrenia | 19348701 | CNVD |
Attention deficit hyperactivity disorder | 19097825 | CNVD |
Autism | 20964600 | CNVD |
Schizophrenia | 19955444 | CNVD |
Schizophrenia | 18990708 | CNVD |
Schizophrenia | 19571808 | CNVD |
Breast cancer | 20409316 | CNVD |
Severe combined immunodeficiency | 19097825 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Autism | 18522746 | CNVD |
Sezary syndrome | 18413736 | CNVD |
Wilms tumour | 21544195 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Cancer | 20164920 | CNVD |
Autism | 19287141 | CNVD |
Schizophrenia | 20967226 | CNVD |
Breast cancer | 17142309 | CNVD |
Cancer | 20164919 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Non-syndromic sensorineural hearing loss | 22297974 | CNVD |
Lung cancer | 18438408 | CNVD |
Breast cancer | 21509527 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Breast cancer | 21364760 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Breast cancer | 22522925 | CNVD |
Stenocardia | 21860640 | CNVD |
Vasospasm | 21860640 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr16:33365600-33369800 | Weak transcription | Right Atrium | heart |
2 | chr16:33369600-33370400 | Enhancers | Primary B cells from peripheral blood | blood |
3 | chr16:33370000-33371200 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
4 | chr16:33371200-33372400 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
5 | chr16:33371200-33372800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
6 | chr16:33371600-33372600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
7 | chr16:33373600-33373800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
8 | chr16:33373800-33374000 | Enhancers | Placenta | Placenta |
9 | chr16:33373800-33374400 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
10 | chr16:33373800-33377000 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
11 | chr16:33374000-33374400 | Bivalent Enhancer | Placenta | Placenta |
12 | chr16:33374600-33376600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
13 | chr16:33375200-33375400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
14 | chr16:33375200-33375800 | ZNF genes & repeats | Right Ventricle | heart |
15 | chr16:33375400-33375800 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
16 | chr16:33375400-33376000 | Bivalent Enhancer | Placenta | Placenta |
17 | chr16:33375400-33377200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
18 | chr16:33376000-33376800 | Enhancers | Placenta | Placenta |
19 | chr16:33377600-33382200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
20 | chr16:33378200-33382600 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
21 | chr16:33379400-33380400 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
22 | chr16:33379600-33380200 | ZNF genes & repeats | Gastric | stomach |
23 | chr16:33379600-33380600 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
24 | chr16:33380000-33380400 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
25 | chr16:33381200-33383400 | Enhancers | Placenta | Placenta |
26 | chr16:33382200-33382400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
27 | chr16:33383200-33383600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
28 | chr16:33383400-33388600 | Weak transcription | Placenta | Placenta |
29 | chr16:33384600-33389000 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
30 | chr16:33385800-33387400 | Enhancers | GM12878-XiMat | blood |
31 | chr16:33388600-33388800 | Enhancers | Placenta | Placenta |
32 | chr16:33388800-33390000 | Weak transcription | Placenta | Placenta |
33 | chr16:33390000-33392800 | Enhancers | Placenta | Placenta |
34 | chr16:33390600-33391600 | Enhancers | Left Ventricle | heart |
35 | chr16:33390600-33392200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
36 | chr16:33391600-33392400 | ZNF genes & repeats | Fetal Brain Male | brain |
37 | chr16:33395800-33396200 | Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
38 | chr16:33396000-33396400 | Bivalent Enhancer | Placenta | Placenta |
39 | chr16:33397600-33398400 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
40 | chr16:33401200-33407200 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
41 | chr16:33401400-33402400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
42 | chr16:33402200-33406200 | Enhancers | Primary B cells from peripheral blood | blood |
43 | chr16:33403000-33403600 | Enhancers | Primary B cells from cord blood | blood |
44 | chr16:33403400-33403800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
45 | chr16:33403400-33405000 | Enhancers | GM12878-XiMat | blood |
46 | chr16:33403400-33407000 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
47 | chr16:33406600-33406800 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
48 | chr16:33406600-33406800 | Bivalent Enhancer | Placenta | Placenta |
49 | chr16:33406600-33406800 | ZNF genes & repeats | Gastric | stomach |
50 | chr16:33406600-33407000 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |