Variant report

Variant	nsv572385
Chromosome Location	chr16:34583626-35285582
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3971)
CpG islands
(count:3725)
Chromatin interactive
region (count:12)
LncRNA
region (count:59)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3971 , 50 per page) page: 1 2 3 4 5 6 7 ... 80

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr16:35249303-35249340	K562	blood:	n/a	n/a
2	ARID3A	chr16:35215806-35216177	HepG2	liver:	n/a	n/a
3	ARID3A	chr16:35281029-35281560	HepG2	liver:	n/a	n/a
4	ATF1	chr16:34768061-34768441	K562	blood:	n/a	n/a
5	ATF1	chr16:35277983-35278202	K562	blood:	n/a	n/a
6	ATF1	chr16:34643912-34644196	K562	blood:	n/a	n/a
7	ATF1	chr16:34787094-34787358	K562	blood:	n/a	n/a
8	ATF1	chr16:35261366-35261566	K562	blood:	n/a	n/a
9	ATF1	chr16:35279340-35279710	K562	blood:	n/a	n/a
10	ATF1	chr16:34589373-34589390	K562	blood:	n/a	n/a
11	ATF1	chr16:35268916-35268944	K562	blood:	n/a	n/a
12	ATF1	chr16:35280891-35281557	K562	blood:	n/a	n/a
13	ATF1	chr16:34625774-34626005	K562	blood:	n/a	n/a
14	ATF1	chr16:34715569-34715609	K562	blood:	n/a	n/a
15	ATF1	chr16:35213351-35213381	K562	blood:	n/a	n/a
16	ATF1	chr16:34765990-34765998	K562	blood:	n/a	n/a
17	ATF1	chr16:35259671-35260040	K562	blood:	n/a	n/a
18	ATF1	chr16:35264269-35264515	K562	blood:	n/a	n/a
19	ATF1	chr16:35239677-35239877	K562	blood:	n/a	n/a
20	ATF1	chr16:35267539-35267911	K562	blood:	n/a	n/a
21	ATF1	chr16:35215804-35216177	K562	blood:	n/a	n/a
22	ATF2	chr16:34833744-34834198	GM12878	blood:	n/a	n/a
23	ATF3	chr16:35215892-35216057	H1-hESC	embryonic stem cell:	n/a	n/a
24	BACH1	chr16:35283677-35284050	K562	blood:	n/a	n/a
25	BACH1	chr16:35219381-35219757	K562	blood:	n/a	n/a
26	BACH1	chr16:35266044-35266101	K562	blood:	n/a	n/a
27	BACH1	chr16:35256899-35257275	K562	blood:	n/a	n/a
28	BACH1	chr16:35238579-35238779	K562	blood:	n/a	n/a
29	BATF	chr16:34796038-34796270	GM12878	blood:	n/a	chr16:34796152-34796163
30	BATF	chr16:35250603-35250848	GM12878	blood:	n/a	n/a
31	BATF	chr16:35255675-35256007	GM12878	blood:	n/a	n/a
32	BATF	chr16:35250156-35250514	GM12878	blood:	n/a	n/a
33	BATF	chr16:35279599-35279898	GM12878	blood:	n/a	n/a
34	BATF	chr16:35246081-35246465	GM12878	blood:	n/a	n/a
35	BATF	chr16:34795349-34795509	GM12878	blood:	n/a	chr16:34795453-34795464
36	BATF	chr16:35254746-35254977	GM12878	blood:	n/a	n/a
37	BATF	chr16:34795249-34795638	GM12878	blood:	n/a	chr16:34795453-34795464
38	BATF	chr16:35237013-35237332	GM12878	blood:	n/a	n/a
39	BATF	chr16:35255667-35255988	GM12878	blood:	n/a	n/a
40	BATF	chr16:35215869-35216143	GM12878	blood:	n/a	n/a
41	BATF	chr16:35215892-35216137	GM12878	blood:	n/a	n/a
42	BATF	chr16:35285282-35285614	GM12878	blood:	n/a	n/a
43	BATF	chr16:35207170-35207358	GM12878	blood:	n/a	n/a
44	BATF	chr16:35253541-35253745	GM12878	blood:	n/a	n/a
45	BATF	chr16:35281265-35281451	GM12878	blood:	n/a	n/a
46	BATF	chr16:35233825-35234355	GM12878	blood:	n/a	n/a
47	BATF	chr16:35245358-35245563	GM12878	blood:	n/a	n/a
48	BATF	chr16:35244531-35244748	GM12878	blood:	n/a	n/a
49	BATF	chr16:35285276-35285638	GM12878	blood:	n/a	n/a
50	BATF	chr16:35254421-35254625	GM12878	blood:	n/a	n/a

(count:3725 , 50 per page) page: 1 2 3 4 5 6 7 ... 75

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr16:34741304-34741354	HRCEpiC	kidney:	n/a
2	chr16:34809256-34809306	A549	lung:	n/a
3	chr16:34712713-34712763	RPTEC	kidney:	n/a
4	chr16:34660044-34660094	K562	blood:	n/a
5	chr16:34741304-34741354	HRCEpiC	kidney:	n/a
6	chr16:34809256-34809306	A549	lung:	n/a
7	chr16:34712713-34712763	RPTEC	kidney:	n/a
8	chr16:34660044-34660094	K562	blood:	n/a
9	chr16:34984121-34984171	SAEC	small airway:	n/a
10	chr16:34648955-34649005	T-47D	breast:	n/a
11	chr16:34787199-34787249	GM12878	blood:	n/a
12	chr16:34791202-34791252	BE2_C	brain:	n/a
13	chr16:34587120-34587170	NH-A	brain:	n/a
14	chr16:34984121-34984171	Hepatocyte	liver:	n/a
15	chr16:34740934-34740984	AoSMC	blood vessel:	n/a
16	chr16:34740934-34740984	GM06990	blood:	n/a
17	chr16:34726734-34726784	HEK293	kidney:	embryo
18	chr16:34741251-34741301	HIPEpiC	eye:	n/a
19	chr16:34740520-34740570	CMK	blood:	n/a
20	chr16:34777682-34777732	GM12892	blood:	n/a
21	chr16:34741251-34741301	HMEC	breast:	n/a
22	chr16:34808939-34808989	NH-A	brain:	n/a
23	chr16:34777881-34777931	GM12891	blood:	n/a
24	chr16:34787199-34787249	CMK	blood:	n/a
25	chr16:35029890-35029940	AG10803	skin:	n/a
26	chr16:34808939-34808989	HepG2	liver:	n/a
27	chr16:34587120-34587170	Caco-2	colon:	n/a
28	chr16:34586894-34586944	BE2_C	brain:	n/a
29	chr16:35029890-35029940	IMR90	lung:	fetal
30	chr16:34741966-34742016	A549	lung:	n/a
31	chr16:34848776-34848826	HCF	heart:	n/a
32	chr16:34716002-34716052	NH-A	brain:	n/a
33	chr16:34648955-34649005	HNPCEpiC	eye:	n/a
34	chr16:34786998-34787048	GM06990	blood:	n/a
35	chr16:34586894-34586944	SKMC	muscle:	n/a
36	chr16:35026985-35027035	A549	lung:	n/a
37	chr16:34983384-34983434	MCF10A-Er-Src	breast:	n/a
38	chr16:35029890-35029940	RPTEC	kidney:	n/a
39	chr16:34777881-34777931	GM19239	blood:	n/a
40	chr16:34809256-34809306	H1-hESC	embryonic stem cell:	embryo
41	chr16:34787597-34787647	LNCaP	prostate:	n/a
42	chr16:34979671-34979721	Hepatocyte	liver:	n/a
43	chr16:34791202-34791252	HRPEpiC	eye:	n/a
44	chr16:34737523-34737573	SK-N-MC	brain:	n/a
45	chr16:34741966-34742016	NHBE	bronchial:	n/a
46	chr16:34809256-34809306	Hepatocyte	liver:	n/a
47	chr16:34979671-34979721	ProgFib	skin:	n/a
48	chr16:34812259-34812309	HIPEpiC	eye:	n/a
49	chr16:34777963-34778013	SK-N-SH	brain:	n/a
50	chr16:34596941-34596991	ProgFib	skin:	n/a

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr16:34815137..34816427-chr16:34875759..34876664,4	MCF-7	breast:
2	chr15:57024256..57026523-chr16:34752267..34754460,2	MCF-7	breast:
3	chr16:34815853..34816462-chr16:34876054..34876591,2	MCF-7	breast:
4	chr16:34726782..34727382-chr16:34760283..34761051,3	MCF-7	breast:
5	chr16:34799028..34799683-chr16:34875753..34876623,3	MCF-7	breast:
6	chr16:34726782..34727382-chr16:34760283..34761051,3	MCF-7	breast:
7	chr16:34799028..34799683-chr16:34875753..34876623,3	MCF-7	breast:
8	chr16:34422640..34423667-chr16:34625487..34626782,3	MCF-7	breast:
9	chr16:34815137..34816427-chr16:34875759..34876664,4	MCF-7	breast:
10	chr15:56788863..56789371-chr16:34759996..34760825,2	MCF-7	breast:
11	chr16:34815853..34816462-chr16:34876054..34876591,2	MCF-7	breast:
12	chr16:35133889..35136586-chr16:35136893..35138863,2	MCF-7	breast:

(count:59 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CTD-2144E22.5.1-6	chr16:34597787-34597899	NONHSAT142183
2	lnc-CTD-2144E22.5.1-6	chr16:34615965-34616632	ENSG00000259841.2
3	lnc-LINC00273-27	chr16:34740133-34740549	NONHSAT142200
4	lnc-LINC00273-25	chr16:34713293-34713362	NONHSAT142192
5	lnc-CTD-2144E22.5.1-6	chr16:34610877-34611020	NONHSAT142183
6	lnc-LINC00273-7	chr16:34729913-34729959	ENSG00000261445.1
7	lnc-LINC00273-8	chr16:34765218-34765705	XLOC_011927
8	lnc-LINC00273-27	chr16:34739459-34739785	NONHSAT142198
9	lnc-CTD-2144E22.5.1-6	chr16:34616840-34616969	ENSG00000259841.2
10	lnc-CTD-2144E22.5.1-6	chr16:34616795-34616969	NONHSAT142183
11	lnc-LINC00273-24	chr16:34640930-34641001	NONHSAT142186
12	lnc-LINC00273-33	chr16:35113407-35113869	NONHSAT142247
13	lnc-CTD-2144E22.5.1-6	chr16:34624074-34624955	ENSG00000259841.2
14	lnc-CTD-2144E22.5.1-6	chr16:34612943-34613184	ENSG00000259841.2
15	lnc-LINC00273-24	chr16:34641562-34641720	NONHSAT142186
16	lnc-LINC00273-23	chr16:34618515-34618930	NONHSAT142185
17	lnc-LINC00273-27	chr16:34739464-34739785	ENSG00000260857.2
18	lnc-LINC00273-31	chr16:35036459-35037041	NONHSAT142244
19	lnc-LINC00273-25	chr16:34712988-34713065	NONHSAT142192
20	lnc-CTD-2144E22.5.1-6	chr16:34614340-34614458	NONHSAT142183
21	lnc-CTD-2144E22.5.1-31	chr16:34756490-34756676	NONHSAT142207
22	lnc-LINC00273-25	chr16:34713636-34713810	NONHSAT142192
23	lnc-LINC00273-9	chr16:35019940-35021258	ENSG00000260611.1
24	lnc-LINC00273-24	chr16:34641253-34641302	NONHSAT142186
25	lnc-LINC00273-7	chr16:34728125-34728568	ENSG00000261445.1
26	lnc-CTD-2144E22.5.1-29	chr16:34723608-34724583	NONHSAT142194
27	lnc-CTD-2144E22.5.1-6	chr16:34612943-34613184	NONHSAT142183
28	lnc-CTD-2144E22.5.1-6	chr16:34597783-34597899	ENSG00000259841.2
29	lnc-LINC00273-28	chr16:34740963-34741308	NONHSAT142204
30	lnc-LINC00273-7	chr16:34730748-34730828	ENSG00000261445.1
31	lnc-LINC00273-25	chr16:34712988-34713065	NONHSAT142191
32	lnc-LINC00273-27	chr16:34740697-34740840	NONHSAT142198
33	lnc-CTD-2144E22.5.1-6	chr16:34617082-34617226	ENSG00000259841.2
34	lnc-LINC00273-25	chr16:34712350-34712699	NONHSAT142191
35	lnc-CTD-2144E22.5.1-31	chr16:34751386-34751515	NONHSAT142207
36	lnc-CTD-2144E22.5.1-31	chr16:34758333-34758358	NONHSAT142207
37	lnc-LINC00273-27	chr16:34739472-34739785	NONHSAT142200
38	lnc-CTD-2144E22.5.1-6	chr16:34610877-34611020	ENSG00000259841.2
39	lnc-CTD-2144E22.5.1-8	chr16:34874400-34874953	ENSG00000259791.1
40	lnc-CTD-2144E22.5.1-6	chr16:34620250-34620420	ENSG00000259841.2
41	lnc-CTD-2144E22.5.1-6	chr16:34625678-34626084	NONHSAT142183
42	lnc-LINC00273-30	chr16:34956639-34956900	NONHSAT142221
43	lnc-CTD-2144E22.5.1-6	chr16:34620250-34620420	NONHSAT142183
44	lnc-CTD-2144E22.5.1-6	chr16:34612943-34613184	ENSG00000259841.2
45	lnc-CTD-2144E22.5.1-6	chr16:34614340-34614458	ENSG00000259841.2
46	lnc-LINC00273-23	chr16:34619259-34619457	NONHSAT142185
47	lnc-CTD-2144E22.5.1-36	chr16:35146491-35146887	NONHSAT142249
48	lnc-CTD-2144E22.5.1-32	chr16:34782288-34783200	NONHSAT142214
49	lnc-LINC00273-27	chr16:34740697-34740833	ENSG00000260857.2
50	lnc-LINC00273-24	chr16:34640118-34640617	NONHSAT142186

No data

Variant related genes	Relation type
ENSG00000260134	TF binding region
VN1R70P	TF binding region
RARRES2P9	TF binding region
RNA5SP417	TF binding region
ENSG00000259836	TF binding region
ENSG00000260611	TF binding region
ENSG00000261046	TF binding region
ENSG00000261122	TF binding region
ENSG00000269622	TF binding region
ENSG00000221580	TF binding region
ENSG00000260341	TF binding region
RNA5SP409	TF binding region
ENSG00000260291	TF binding region
ENSG00000260746	TF binding region
RNA5SP419	TF binding region
RNA5SP407	TF binding region
ENSG00000261299	TF binding region
ENSG00000260994	TF binding region
ENSG00000260598	TF binding region
RNA5SP421	TF binding region
ENSG00000261733	TF binding region
ENSG00000260857	TF binding region
ENSG00000261445	TF binding region
AGGF1P4	TF binding region
RNA5SP406	TF binding region
ENSG00000261350	TF binding region
ENSG00000259791	TF binding region
RNA5SP408	TF binding region
ENSG00000260153	TF binding region
ENSG00000214581	TF binding region
RNA5SP416	TF binding region
RNA5SP410	TF binding region
RNA5SP413	TF binding region
ENSG00000259841	TF binding region
ENSG00000261782	TF binding region
ENSG00000260522	TF binding region
RNA5SP420	TF binding region
RNA5SP423	TF binding region
RNA5SP415	TF binding region
RNA5SP418	TF binding region
RNA5SP422	TF binding region
RARRES2P8	TF binding region
ENSG00000261711	TF binding region
RARRES2P7	TF binding region
HMGN2P41	TF binding region
ENSG00000260480	TF binding region
ENSG00000260680	TF binding region
PPP1R1AP2	TF binding region
ENSG00000260134	CpG island
VN1R70P	CpG island
RARRES2P9	CpG island
RNA5SP417	CpG island
ENSG00000259836	CpG island
ENSG00000260611	CpG island
ENSG00000261046	CpG island
ENSG00000261122	CpG island
ENSG00000269622	CpG island
ENSG00000221580	CpG island
ENSG00000260341	CpG island
RNA5SP409	CpG island
ENSG00000260291	CpG island
ENSG00000260746	CpG island
RNA5SP419	CpG island
RNA5SP407	CpG island
ENSG00000261299	CpG island
ENSG00000260994	CpG island
ENSG00000260598	CpG island
RNA5SP421	CpG island
ENSG00000261733	CpG island
ENSG00000260857	CpG island
ENSG00000261445	CpG island
AGGF1P4	CpG island
RNA5SP406	CpG island
ENSG00000261350	CpG island
ENSG00000259791	CpG island
RNA5SP408	CpG island
ENSG00000260153	CpG island
ENSG00000214581	CpG island
RNA5SP416	CpG island
RNA5SP410	CpG island
RNA5SP413	CpG island
ENSG00000259841	CpG island
ENSG00000261782	CpG island
ENSG00000260522	CpG island
RNA5SP420	CpG island
RNA5SP423	CpG island
RNA5SP415	CpG island
RNA5SP418	CpG island
RNA5SP422	CpG island
RARRES2P8	CpG island
ENSG00000261711	CpG island
RARRES2P7	CpG island
HMGN2P41	CpG island
ENSG00000260480	CpG island
ENSG00000260680	CpG island
PPP1R1AP2	CpG island
ENSG00000221580	chromatin interactions
ENSG00000137871	chromatin interactions
ZNF407	miRNA target sites
ZNF451	miRNA target sites

Extended variants
information (count: 21720 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:21720 , 50 per page) page: 1 2 3 4 5 6 7 ... 435

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs535920574	chr16:34583830-34583831	Inactive region	TF binding region	2 gene(s)	Overlapped CNVs	n/a
2	rs13336834	chr16:34583831-34583832	Inactive region	TF binding region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs72485966	chr16:34583896-34583897	Inactive region	TF binding region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs1632146	chr16:34583897-34583898	Inactive region	TF binding region	2 gene(s)	Overlapped CNVs	n/a
5	rs560165601	chr16:34585263-34585264	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs186270661	chr16:34585279-34585280	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs34525592	chr16:34585331-34585332	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs570476876	chr16:34585332-34585333	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs71641815	chr16:34585340-34585341	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs539713781	chr16:34585362-34585363	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs73546176	chr16:34585378-34585379	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs117941315	chr16:34585390-34585391	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs147243109	chr16:34585414-34585415	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs538191253	chr16:34585459-34585460	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs369146636	chr16:34585480-34585481	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs550055258	chr16:34585488-34585489	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs553038249	chr16:34585531-34585532	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs139552564	chr16:34586659-34586660	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs560787819	chr16:34586664-34586665	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs28514837	chr16:34586723-34586724	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs575750937	chr16:34586724-34586725	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs545894286	chr16:34586738-34586739	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs577852709	chr16:34586752-34586753	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs545566442	chr16:34586757-34586758	Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs373409549	chr16:34586760-34586761	Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs531353915	chr16:34586780-34586781	Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs575015823	chr16:34586788-34586789	Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs543467380	chr16:34586795-34586796	Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs561650548	chr16:34586796-34586797	Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs529226551	chr16:34586833-34586834	Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs547371939	chr16:34586854-34586855	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs61732069	chr16:34586891-34586892	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs532942767	chr16:34586960-34586961	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs553953903	chr16:34586976-34586977	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs552275958	chr16:34586987-34586988	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs570639401	chr16:34586992-34586993	Bivalent/Poised TSS Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs557432613	chr16:34587029-34587030	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs201273948	chr16:34587031-34587032	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs61732070	chr16:34587038-34587039	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs117559956	chr16:34587087-34587088	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs568362093	chr16:34587097-34587098	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs536150979	chr16:34587099-34587100	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs554132460	chr16:34587115-34587116	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs572618830	chr16:34587123-34587124	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs546388757	chr16:34587128-34587129	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs558358044	chr16:34587181-34587182	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs565052481	chr16:34587186-34587187	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs543534084	chr16:34587213-34587214	Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs561711267	chr16:34587251-34587252	Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs528837207	chr16:34587284-34587285	Bivalent/Poised TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Autism	22566537	CNVD
Intellectual disability	22566537	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Ductal carcinoma	22052326	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Hepatocellular carcinoma	16750200	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	21785460	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Benign familial neonatal-infantile seizures	21060786	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Cancer	21183584	CNVD
Disorders of sex development	21048976	CNVD
Low-grade fibromyxoid sarcoma	21536545	CNVD
Breast cancer	21045282	CNVD
Autism	19050728	CNVD
Epilepsy	20923578	CNVD
Psychiatric disorder	19050728	CNVD
Schizophrenia	19348701	CNVD
Attention deficit hyperactivity disorder	19097825	CNVD
Autism	20964600	CNVD
Schizophrenia	19955444	CNVD
Schizophrenia	18990708	CNVD
Schizophrenia	19571808	CNVD
Breast cancer	20409316	CNVD
Severe combined immunodeficiency	19097825	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Autism	18522746	CNVD
Wilms tumour	21544195	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	21364760	CNVD
Renal cell carcinoma	18194544	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	21509527	CNVD
Schizophrenia	20967226	CNVD
Williams Syndrome	20824207	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Schizophrenia	23813976	CNVD
early-passage human iPS cells	21368824	CNVD
Myelofibrosis	22110671	CNVD
Autism	19287141	CNVD
Prostate cancer	18632612	CNVD
Autism	18414403	CNVD
Breast cancer	22522925	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Lung adenocarcinoma	21935476	CNVD
Medulloblastoma	21163964	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:837 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:34586600-34587000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
2	chr16:34586600-34587000	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr16:34586600-34587200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
4	chr16:34586600-34587200	Active TSS	Brain Cingulate Gyrus	brain
5	chr16:34586600-34587400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
6	chr16:34586800-34587000	ZNF genes & repeats	Pancreas	Pancrea
7	chr16:34586800-34587200	Active TSS	Brain Substantia Nigra	brain
8	chr16:34586800-34587200	ZNF genes & repeats	Esophagus	oesophagus
9	chr16:34587000-34587200	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr16:34595400-34595800	Enhancers	Brain Angular Gyrus	brain
11	chr16:34595400-34595800	Enhancers	Brain Cingulate Gyrus	brain
12	chr16:34595400-34596200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr16:34595400-34596400	Enhancers	Brain Hippocampus Middle	brain
14	chr16:34595600-34595800	Enhancers	Brain Substantia Nigra	brain
15	chr16:34595600-34596200	Enhancers	Brain Inferior Temporal Lobe	brain
16	chr16:34598400-34606600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
17	chr16:34599200-34602000	Enhancers	NHEK	skin
18	chr16:34599600-34600600	Enhancers	HMEC	breast
19	chr16:34600000-34600400	Enhancers	Breast Myoepithelial Primary Cells	Breast
20	chr16:34600000-34601000	Enhancers	Skeletal Muscle Female	skeletal muscle
21	chr16:34600600-34604600	Weak transcription	HMEC	breast
22	chr16:34602000-34603000	Weak transcription	NHEK	skin
23	chr16:34602200-34606400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
24	chr16:34603000-34606000	Enhancers	NHEK	skin
25	chr16:34604600-34605200	Enhancers	HMEC	breast
26	chr16:34610800-34615200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
27	chr16:34615200-34616800	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
28	chr16:34624000-34629600	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
29	chr16:34625600-34626000	Active TSS	Brain Substantia Nigra	brain
30	chr16:34625600-34626000	Active TSS	Skeletal Muscle Male	skeletal muscle
31	chr16:34626800-34632400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
32	chr16:34627600-34630400	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr16:34630400-34631400	Enhancers	NHEK	skin
34	chr16:34631400-34632600	Weak transcription	NHEK	skin
35	chr16:34631800-34633000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr16:34632200-34633000	Enhancers	Colon Smooth Muscle	Colon
37	chr16:34632600-34633000	Enhancers	NHEK	skin
38	chr16:34638800-34649000	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
39	chr16:34639800-34640000	Enhancers	Colon Smooth Muscle	Colon
40	chr16:34639800-34640000	Enhancers	Skeletal Muscle Female	skeletal muscle
41	chr16:34640000-34640200	Flanking Active TSS	Colon Smooth Muscle	Colon
42	chr16:34640000-34640600	Enhancers	Skeletal Muscle Male	skeletal muscle
43	chr16:34640000-34640600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
44	chr16:34640000-34640800	Enhancers	Rectal Smooth Muscle	rectum
45	chr16:34640000-34642000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
46	chr16:34640200-34640400	Enhancers	Colon Smooth Muscle	Colon
47	chr16:34640200-34640600	Active TSS	Duodenum Smooth Muscle	Duodenum
48	chr16:34640400-34640600	Flanking Active TSS	Colon Smooth Muscle	Colon
49	chr16:34640600-34640800	Enhancers	Skeletal Muscle Female	skeletal muscle
50	chr16:34668600-34675000	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell

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