Variant report

Variant	nsv574462
Chromosome Location	chr17:15447364-15611495
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2653)
CpG islands
(count:2381)
Chromatin interactive
region (count:27)
LncRNA
region (count:51)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2653 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr17:15554939-15555392	K562	blood:	n/a	n/a
2	ARID3A	chr17:15602736-15603024	HepG2	liver:	n/a	n/a
3	ARID3A	chr17:15520261-15520519	HepG2	liver:	n/a	n/a
4	ATF1	chr17:15554926-15555327	K562	blood:	n/a	n/a
5	ATF1	chr17:15602817-15603017	K562	blood:	n/a	n/a
6	ATF1	chr17:15466756-15466960	K562	blood:	n/a	n/a
7	ATF2	chr17:15466618-15466919	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr17:15602639-15603127	GM12878	blood:	n/a	n/a
9	ATF3	chr17:15554934-15555319	K562	blood:	n/a	n/a
10	ATF3	chr17:15555127-15555288	K562	blood:	n/a	n/a
11	BACH1	chr17:15602905-15603025	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr17:15587522-15587574	K562	blood:	n/a	n/a
13	BACH1	chr17:15587367-15587738	H1-hESC	embryonic stem cell:	n/a	n/a
14	BATF	chr17:15549330-15549670	GM12878	blood:	n/a	n/a
15	BATF	chr17:15492808-15493262	GM12878	blood:	n/a	chr17:15492991-15492999 chr17:15493146-15493154
16	BATF	chr17:15516715-15517005	GM12878	blood:	n/a	n/a
17	BATF	chr17:15516677-15517084	GM12878	blood:	n/a	n/a
18	BATF	chr17:15549291-15550002	GM12878	blood:	n/a	n/a
19	BATF	chr17:15512843-15513108	GM12878	blood:	n/a	n/a
20	BATF	chr17:15499439-15499718	GM12878	blood:	n/a	chr17:15499580-15499591
21	BATF	chr17:15466672-15466916	GM12878	blood:	n/a	n/a
22	BATF	chr17:15466057-15466266	GM12878	blood:	n/a	chr17:15466151-15466162
23	BATF	chr17:15465983-15466296	GM12878	blood:	n/a	chr17:15466151-15466162
24	BATF	chr17:15492845-15493213	GM12878	blood:	n/a	chr17:15492991-15492999 chr17:15493146-15493154
25	BATF	chr17:15602698-15603139	GM12878	blood:	n/a	n/a
26	BCL11A	chr17:15548890-15549084	GM12878	blood:	n/a	chr17:15549009-15549018
27	BCL11A	chr17:15602570-15603218	GM12878	blood:	n/a	n/a
28	BCL11A	chr17:15492851-15493235	GM12878	blood:	n/a	n/a
29	BCL11A	chr17:15549404-15549593	GM12878	blood:	n/a	n/a
30	BCL11A	chr17:15492818-15493314	GM12878	blood:	n/a	n/a
31	BCL3	chr17:15548736-15549375	A549	lung:	n/a	chr17:15549009-15549018
32	BCL3	chr17:15587434-15587831	A549	lung:	n/a	chr17:15587623-15587632
33	BCL3	chr17:15553870-15555356	A549	lung:	n/a	n/a
34	BCL3	chr17:15554150-15555483	A549	lung:	n/a	n/a
35	BHLHE40	chr17:15587520-15587720	GM12878	blood:	n/a	n/a
36	BHLHE40	chr17:15554818-15555284	K562	blood:	n/a	n/a
37	BHLHE40	chr17:15602827-15603100	K562	blood:	n/a	n/a
38	BHLHE40	chr17:15492799-15492963	GM12878	blood:	n/a	n/a
39	BHLHE40	chr17:15602795-15603168	GM12878	blood:	n/a	n/a
40	BRCA1	chr17:15602716-15603056	HepG2	liver:	n/a	chr17:15602870-15602879
41	BRCA1	chr17:15587530-15587649	Hela-S3	cervix:	n/a	n/a
42	BRCA1	chr17:15466774-15466842	Hela-S3	cervix:	n/a	n/a
43	BRCA1	chr17:15554914-15555335	Hela-S3	cervix:	n/a	n/a
44	BRCA1	chr17:15602639-15603141	Hela-S3	cervix:	n/a	chr17:15602870-15602879
45	BRCA1	chr17:15602708-15603099	GM12878	blood:	n/a	chr17:15602870-15602879
46	BRCA1	chr17:15562808-15563384	Hela-S3	cervix:	n/a	n/a
47	BRCA1	chr17:15602711-15603054	H1-hESC	embryonic stem cell:	n/a	chr17:15602870-15602879
48	BRCA1	chr17:15553247-15553644	Hela-S3	cervix:	n/a	n/a
49	CBX3	chr17:15602574-15603183	K562	blood:	n/a	n/a
50	CBX3	chr17:15554835-15555365	K562	blood:	n/a	n/a

(count:2381 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr17:15492168-15492218	HMEC	breast:	n/a
2	chr17:15524026-15524076	SK-N-SH	brain:	n/a
3	chr17:15492168-15492218	HMEC	breast:	n/a
4	chr17:15524026-15524076	SK-N-SH	brain:	n/a
5	chr17:15602157-15602207	HCT-116	colon:	n/a
6	chr17:15608443-15608493	MCF-7	breast:	n/a
7	chr17:15466921-15466971	NB4	blood:	n/a
8	chr17:15467447-15467497	CMK	blood:	n/a
9	chr17:15602880-15602930	GM19239	blood:	n/a
10	chr17:15522897-15522947	SK-N-SH	brain:	n/a
11	chr17:15606456-15606506	H1-hESC	embryonic stem cell:	embryo
12	chr17:15554603-15554653	RPTEC	kidney:	n/a
13	chr17:15466826-15466876	HUVEC	blood vessel:	n/a
14	chr17:15610476-15610526	BJ	skin:	n/a
15	chr17:15587279-15587329	LNCaP	prostate:	n/a
16	chr17:15586170-15586220	AoSMC	blood vessel:	n/a
17	chr17:15522876-15522926	HUVEC	blood vessel:	n/a
18	chr17:15607775-15607825	HCF	heart:	n/a
19	chr17:15467188-15467238	HCF	heart:	n/a
20	chr17:15602714-15602764	AG09319	gingival:	n/a
21	chr17:15602714-15602764	HCT-116	colon:	n/a
22	chr17:15610476-15610526	NHDF-neo	bronchial:	n/a
23	chr17:15467135-15467185	U87	brain:	n/a
24	chr17:15522897-15522947	PFSK-1	brain:	n/a
25	chr17:15523999-15524049	HEK293	kidney:	embryo
26	chr17:15608033-15608083	SAEC	small airway:	n/a
27	chr17:15602714-15602764	SK-N-SH_RA	brain:	n/a
28	chr17:15607775-15607825	H1-hESC	embryonic stem cell:	embryo
29	chr17:15492168-15492218	SK-N-MC	brain:	n/a
30	chr17:15492168-15492218	AG09309	skin:	n/a
31	chr17:15467188-15467238	ovcar-3	ovarian:	n/a
32	chr17:15587147-15587197	HEEpiC	esophagus:	n/a
33	chr17:15523999-15524049	BE2_C	brain:	n/a
34	chr17:15600659-15600709	H1-hESC	embryonic stem cell:	embryo
35	chr17:15467188-15467238	GM12891	blood:	n/a
36	chr17:15603030-15603080	SK-N-MC	brain:	n/a
37	chr17:15587279-15587329	HAEpiC	amniotic membrane:	n/a
38	chr17:15606456-15606506	SAEC	small airway:	n/a
39	chr17:15608033-15608083	HCM	heart:	n/a
40	chr17:15602714-15602764	PFSK-1	brain:	n/a
41	chr17:15603030-15603080	HPAEpiC	pulmonary alveolar:	n/a
42	chr17:15466380-15466430	RPTEC	kidney:	n/a
43	chr17:15602880-15602930	Hela-S3	cervix:	n/a
44	chr17:15587124-15587174	HAEpiC	amniotic membrane:	n/a
45	chr17:15586426-15586476	HNPCEpiC	eye:	n/a
46	chr17:15608033-15608083	CMK	blood:	n/a
47	chr17:15586426-15586476	MCF-7	breast:	n/a
48	chr17:15607775-15607825	BJ	skin:	n/a
49	chr17:15466921-15466971	HRCEpiC	kidney:	n/a
50	chr17:15602714-15602764	T-47D	breast:	n/a

(count:27 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr17:15553842..15556755-chr17:15901183..15904132,3	MCF-7	breast:
2	chr17:15582137..15583945-chr17:15586739..15588630,2	MCF-7	breast:
3	chr17:14078689..14080446-chr17:15474904..15476529,2	MCF-7	breast:
4	chr17:1303001..1303723-chr17:15554504..15555037,2	Hela-S3	cervix:
5	chr17:15554505..15555485-chr7:12250755..12251548,2	Hela-S3	cervix:
6	chr17:15551872..15554786-chr17:16116224..16118866,3	MCF-7	breast:
7	chr17:15563102..15563727-chr17:15973385..15973964,2	MCF-7	breast:
8	chr17:15541952..15544765-chr17:15553019..15555949,2	MCF-7	breast:
9	chr17:15081140..15081829-chr17:15562872..15563684,2	MCF-7	breast:
10	chr17:15552019..15554730-chr17:16119203..16121978,2	MCF-7	breast:
11	chr17:15457303..15459524-chr17:15462785..15464978,2	K562	blood:
12	chr17:15160810..15162326-chr17:15564040..15566649,2	K562	blood:
13	chr17:15553193..15554003-chr6:27114645..27115287,2	Hela-S3	cervix:
14	chr17:15553921..15556547-chr17:15556624..15558829,2	K562	blood:
15	chr17:15561055..15565103-chr17:15565320..15567687,3	MCF-7	breast:
16	chr17:15553921..15556544-chr17:15556861..15558829,2	K562	blood:
17	chr17:15457303..15459524-chr17:15462785..15464978,2	K562	blood:
18	chr1:150551989..150552685-chr17:15554385..15554952,2	MCF-7	breast:
19	chr17:15561055..15565103-chr17:15565320..15567687,3	MCF-7	breast:
20	chr17:15603099..15603617-chr17:18585233..18585750,2	HCT-116	colon:
21	chr17:15555196..15556875-chr17:15562176..15564992,2	K562	blood:
22	chr17:15555196..15556875-chr17:15562176..15564992,2	K562	blood:
23	chr17:15553526..15556124-chr17:15902249..15904435,2	MCF-7	breast:
24	chr17:15565672..15568468-chr17:15583905..15586616,2	MCF-7	breast:
25	chr17:15523258..15525721-chr17:15553845..15555566,2	MCF-7	breast:
26	chr1:145610525..145611182-chr17:15554605..15555423,2	Hela-S3	cervix:
27	chr17:15549060..15550660-chr17:18619947..18621697,2	MCF-7	breast:

(count:51 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP11-385D13.1.1-1	chr17:15586350-15586471	NONHSAT145845
2	lnc-ZNF286A-7	chr17:15603362-15603853	NONHSAT145849
3	lnc-RP11-385D13.1.1-1	chr17:15584179-15584267	NONHSAT145838
4	lnc-RP11-385D13.1.1-1	chr17:15586350-15586471	NONHSAT145841
5	lnc-RP11-385D13.1.1-1	chr17:15584365-15584536	NONHSAT145838
6	lnc-RP11-385D13.1.1-1	chr17:15586168-15586278	NONHSAT145845
7	lnc-RP11-385D13.1.1-1	chr17:15580889-15580996	NONHSAT145844
8	lnc-ZNF286A-7	chr17:15603449-15603680	NONHSAT145848
9	lnc-RP11-385D13.1.1-1	chr17:15586350-15586471	NONHSAT145838
10	lnc-RP11-385D13.1.1-1	chr17:15555151-15555260	NONHSAT145840
11	lnc-RP11-385D13.1.1-1	chr17:15587510-15587613	NONHSAT145846
12	lnc-RP11-385D13.1.1-1	chr17:15587510-15587612	NONHSAT145845
13	lnc-ZNF286A-7	chr17:15604466-15604614	NONHSAT145848
14	lnc-ZSWIM7-1	chr17:15596563-15596608	ENSG00000248550
15	lnc-ZSWIM7-1	chr17:15555480-15555527	ENSG00000248550
16	lnc-RP11-385D13.1.1-1	chr17:15586350-15586471	NONHSAT145844
17	lnc-RP11-385D13.1.1-1	chr17:15562116-15562190	NONHSAT145840
18	lnc-RP11-385D13.1.1-1	chr17:15587510-15587589	NONHSAT145841
19	lnc-RP11-385D13.1.1-1	chr17:15586168-15586265	NONHSAT145846
20	lnc-RP11-385D13.1.1-1	chr17:15586168-15586265	NONHSAT145841
21	lnc-ZNF286A-7	chr17:15604466-15604544	NONHSAT145853
22	lnc-ZNF286A-7	chr17:15602895-15603091	NONHSAT145849
23	lnc-RP11-385D13.1.1-1	chr17:15584179-15584267	NONHSAT145843
24	lnc-ZNF286A-7	chr17:15603054-15603091	NONHSAT145850
25	lnc-RP11-385D13.1.1-1	chr17:15580489-15580591	NONHSAT145843
26	lnc-ZNF286A-7	chr17:15602891-15603091	NONHSAT145848
27	lnc-RP11-385D13.1.1-1	chr17:15546048-15546130	NONHSAT145838
28	lnc-RP11-385D13.1.1-1	chr17:15587510-15587611	NONHSAT145838
29	lnc-ZNF286A-1	chr17:15554904-15555428	ENSG00000266261.1
30	lnc-RP11-385D13.1.1-1	chr17:15586350-15586471	NONHSAT145840
31	lnc-RP11-385D13.1.1-1	chr17:15587510-15587625	NONHSAT145847
32	lnc-RP11-385D13.1.1-1	chr17:15587510-15587580	NONHSAT145840
33	lnc-RP11-385D13.1.1-1	chr17:15587510-15587615	NONHSAT145843
34	lnc-RP11-385D13.1.1-1	chr17:15587510-15587613	NONHSAT145844
35	lnc-ZNF286A-7	chr17:15603477-15603901	NONHSAT145853
36	lnc-RP11-385D13.1.1-1	chr17:15580889-15581035	NONHSAT145843
37	lnc-ZNF286A-1	chr17:15557758-15557803	ENSG00000266261.1
38	lnc-RP11-385D13.1.1-1	chr17:15586350-15586685	NONHSAT145847
39	lnc-RP11-385D13.1.1-1	chr17:15586168-15586265	NONHSAT145840
40	lnc-RP11-385D13.1.1-1	chr17:15586168-15586265	NONHSAT145844
41	lnc-RP11-385D13.1.1-1	chr17:15584179-15584267	NONHSAT145845
42	lnc-RP11-385D13.1.1-1	chr17:15584179-15584267	NONHSAT145844
43	lnc-RP11-385D13.1.1-1	chr17:15584179-15584267	NONHSAT145840
44	lnc-RP11-385D13.1.1-1	chr17:15586350-15586471	NONHSAT145846
45	lnc-RP11-385D13.1.1-1	chr17:15586168-15586265	NONHSAT145847
46	lnc-RP11-385D13.1.1-1	chr17:15584402-15584536	NONHSAT145846
47	lnc-ZNF286A-7	chr17:15603449-15603991	NONHSAT145850
48	lnc-RP11-385D13.1.1-1	chr17:15584179-15584267	NONHSAT145841
49	lnc-RP11-385D13.1.1-1	chr17:15557576-15557745	NONHSAT145841
50	lnc-RP11-385D13.1.1-1	chr17:15580945-15581035	NONHSAT145845

No data

Variant related genes	Relation type
ENSG00000187607	TF binding region
TVP23C-CDRT4	TF binding region
TVP23C	TF binding region
UBE2SP1	TF binding region
ENSG00000181464	TF binding region
TRIM16	TF binding region
ENSG00000252129	TF binding region
ENSG00000223544	TF binding region
ENSG00000251537	TF binding region
ZNF29P	TF binding region
ENSG00000266261	TF binding region
CDRT1	TF binding region
ZNF286A	TF binding region
ENSG00000187607	CpG island
TVP23C-CDRT4	CpG island
TVP23C	CpG island
UBE2SP1	CpG island
ENSG00000181464	CpG island
TRIM16	CpG island
ENSG00000252129	CpG island
ENSG00000223544	CpG island
ENSG00000251537	CpG island
ZNF29P	CpG island
ENSG00000266261	CpG island
CDRT1	CpG island
ZNF286A	CpG island
ENSG00000108474	chromatin interactions
ENSG00000121848	chromatin interactions
ENSG00000186141	chromatin interactions
ENSG00000184825	chromatin interactions
ENSG00000251537	chromatin interactions
ENSG00000108953	chromatin interactions
ENSG00000266261	chromatin interactions
ENSG00000249459	chromatin interactions
ENSG00000214941	chromatin interactions
ENSG00000221926	chromatin interactions
ENSG00000106460	chromatin interactions
ENSG00000143384	chromatin interactions
ENSG00000011295	chromatin interactions
ENSG00000141027	chromatin interactions
PFKFB2	miRNA target sites
PHF17	miRNA target sites

Extended variants
information (count: 5377 )
Associated
traits (count: 131 )

Variant overlapped rSNPs/rCNVs (count:5377 , 50 per page) page: 1 2 3 4 5 6 7 ... 108

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2938158	chr17:15447364-15447365	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs540521277	chr17:15447396-15447397	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs137936056	chr17:15447486-15447487	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs559923401	chr17:15447531-15447532	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs528907747	chr17:15447562-15447563	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs116562684	chr17:15447614-15447615	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs2589684	chr17:15447623-15447624	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs368345803	chr17:15447648-15447649	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs531259530	chr17:15447725-15447726	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs551606932	chr17:15447730-15447731	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs571498173	chr17:15447763-15447764	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs534254396	chr17:15447773-15447774	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs141431441	chr17:15447777-15447778	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs567832918	chr17:15447957-15447958	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs536663473	chr17:15447959-15447960	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs556241648	chr17:15448004-15448005	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs576612205	chr17:15448023-15448024	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs578206712	chr17:15448035-15448036	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs200617307	chr17:15448036-15448037	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs539127649	chr17:15448098-15448099	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs558021223	chr17:15448106-15448107	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs190895056	chr17:15448133-15448134	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs540403757	chr17:15448156-15448157	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs57820353	chr17:15448168-15448169	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs375397228	chr17:15448181-15448182	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs554051656	chr17:15448229-15448230	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs12450350	chr17:15448271-15448272	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs59021039	chr17:15448307-15448308	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs542611522	chr17:15448317-15448318	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs562342593	chr17:15448352-15448353	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs58027575	chr17:15448438-15448439	Weak transcription Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs58604158	chr17:15448484-15448485	Weak transcription Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs58594704	chr17:15448501-15448502	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs188847168	chr17:15448511-15448512	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs60060453	chr17:15448521-15448522	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs544688207	chr17:15448578-15448579	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs563751464	chr17:15448596-15448597	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs57033789	chr17:15448599-15448600	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs58128755	chr17:15448611-15448612	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs58935206	chr17:15448620-15448621	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs146884206	chr17:15448638-15448639	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs565163019	chr17:15448644-15448645	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs193034096	chr17:15448665-15448666	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs140691707	chr17:15448742-15448743	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs576039639	chr17:15448757-15448758	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs567956545	chr17:15448777-15448778	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs141322500	chr17:15448785-15448786	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs58527847	chr17:15448814-15448815	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs144409208	chr17:15448874-15448875	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs60195490	chr17:15448886-15448887	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:131)

Disease	PMID	Source
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	17603634	CNVD
Melanoma	18172304	CNVD
Glioblastoma multiforme	19435819	CNVD
Non-small cell lung cancer	19010865	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16774939	CNVD
Hepatocellular carcinoma	18803288	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Burkitt''s lymphoma	19759907	CNVD
Wilms tumour	21544195	CNVD
Esophageal adenocarcinoma	18519675	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Medulloblastoma	21979893	CNVD
Breast cancer	16608533	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Chordoma	21602918	CNVD
Miller-Dieker syndrome	22283845	CNVD
Non-syndromic sensorineural hearing loss	17457615	CNVD
Cancer	22429812	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Ewing''s sarcoma	21437220	CNVD
Follicular lymphoma	19010834	CNVD
Colorectal cancer	20709793	CNVD
Acute myeloid leukemia	16864856	CNVD
Endometrial cancer	22040021	CNVD
Paraganglioma	21461997	CNVD
Pheochromocytoma	21461997	CNVD
Breast cancer	22028636	CNVD
Breast cancer	20837533	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
colon cancer	17210682	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Basal cell lymphoma	17053054	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Cancer	16751803	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Chronic lymphocytic leukemia	17971485	CNVD
Basal cell lymphoma	17170743	CNVD
Breast cancer	16461572	CNVD
Colorectal cancer	16272173	CNVD
Follicular lymphoma	17170743	CNVD
Human rectal carcinomas	16397240	CNVD
Breast cancer	17133270	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Ovarian cancer	22174824	CNVD
Moyamoya disease	22323933	CNVD
small cell lung cancer	20016488	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	21251322	CNVD
Myelodysplastic syndrome	21251322	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20724749	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Acute myeloid leukemia	17237825	CNVD
Colorectal cancer	21645411	CNVD
HIV/AIDS	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
HIV/AIDS	17953491	CNVD
HIV/AIDS	20877625	CNVD
Immune disease	21076436	CNVD
Rheumatoid arthritis	17953491	CNVD
Type 1 diabetes	17953491	CNVD
HIV/AIDS	15637236	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Ovarian cancer	21781307	CNVD
Autism	22495311	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Neurofibromatosis	18196300	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Multiple myeloma	16616336	CNVD
Multiple myeloma	17550852	CNVD
Breast cancer	21509527	CNVD
Pancreatic cancer	21811587	CNVD
Autism	17322880	CNVD
Hereditary neuropathy with liability to pressure palsy	19521722	CNVD
Schizophrenia	19571808	CNVD
Schizophrenia	19955444	CNVD
Charcot-marie-tooth disease	18787571	CNVD
Breast cancer	20409316	CNVD
Autism	18414403	CNVD
Breast cancer	17001317	CNVD
Rhabdomyosarcoma	16790082	CNVD
Myelofibrosis	22110671	CNVD
Peripheral neuropathy	21193943	CNVD
Schizophrenia	20587603	CNVD
Schizophrenia	22958593	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Ovarian cancer	20844748	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Charcot-marie-tooth disease	16463004	CNVD
Osteosarcoma	22292074	CNVD
Charcot	16760730	CNVD
Mental retardation	17901693	CNVD
ovarian endometriomas	16273235	CNVD
Breast cancer	21858162	CNVD
Ovarian cancer	21720365	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	17142309	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Autism	22102821	CNVD
Gastric cancer	18160780	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Type 1 diabetes	21085585	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	19212409	CNVD

Chromatin state (count:2978 , 50 per page) page: 1 2 3 4 5 6 7 ... 60

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:15383400-15455000	Weak transcription	Gastric	stomach
2	chr17:15393400-15451200	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr17:15394800-15450800	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr17:15406800-15450600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr17:15416200-15466000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr17:15417600-15466400	Weak transcription	Ovary	ovary
7	chr17:15418600-15450600	Weak transcription	Brain Angular Gyrus	brain
8	chr17:15418800-15450600	Weak transcription	Brain Cingulate Gyrus	brain
9	chr17:15419800-15448400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr17:15420000-15448400	Weak transcription	Placenta	Placenta
11	chr17:15420000-15450800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
12	chr17:15420200-15448600	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr17:15420400-15452800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr17:15420600-15459600	Weak transcription	Primary T helper cells PMA-I stimulated	--
15	chr17:15420800-15448200	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr17:15420800-15448400	Weak transcription	Fetal Muscle Leg	muscle
17	chr17:15420800-15448400	Weak transcription	HSMM	muscle
18	chr17:15420800-15450200	Weak transcription	Brain Germinal Matrix	brain
19	chr17:15421200-15450800	Weak transcription	Fetal Kidney	kidney
20	chr17:15421200-15453000	Weak transcription	Aorta	Aorta
21	chr17:15421800-15465600	Weak transcription	Hela-S3	cervix
22	chr17:15422400-15448400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr17:15422800-15465800	Weak transcription	Fetal Intestine Small	intestine
24	chr17:15423000-15448400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr17:15423000-15451000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr17:15429400-15448400	Weak transcription	Duodenum Mucosa	Duodenum
27	chr17:15429400-15448400	Weak transcription	Fetal Lung	lung
28	chr17:15429400-15450400	Weak transcription	Rectal Mucosa Donor 29	rectum
29	chr17:15429800-15448400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr17:15429800-15450400	Weak transcription	Primary monocytes fromperipheralblood	blood
31	chr17:15429800-15466000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr17:15429800-15466400	Weak transcription	Rectal Mucosa Donor 31	rectum
33	chr17:15430200-15448400	Weak transcription	Fetal Intestine Large	intestine
34	chr17:15431000-15465400	Weak transcription	K562	blood
35	chr17:15433000-15449400	Weak transcription	HMEC	breast
36	chr17:15433800-15450600	Weak transcription	Brain Hippocampus Middle	brain
37	chr17:15434600-15448600	Weak transcription	Monocytes-CD14+_RO01746	blood
38	chr17:15435600-15449200	Weak transcription	Fetal Thymus	thymus
39	chr17:15436200-15448400	Weak transcription	HSMMtube	muscle
40	chr17:15437000-15448400	Weak transcription	Primary T cells fromperipheralblood	blood
41	chr17:15437200-15450400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
42	chr17:15438400-15448200	Weak transcription	Liver	Liver
43	chr17:15438800-15450400	Weak transcription	Sigmoid Colon	Sigmoid Colon
44	chr17:15439000-15466000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr17:15439600-15450200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr17:15439600-15456000	Weak transcription	Colon Smooth Muscle	Colon
47	chr17:15439600-15466000	Weak transcription	H9 Cell Line	embryonic stem cell
48	chr17:15439800-15466400	Weak transcription	Primary B cells from peripheral blood	blood
49	chr17:15440000-15450800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
50	chr17:15440200-15466400	Weak transcription	Left Ventricle	heart

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