Variant report

Variant nsv575484
Chromosome Location chr17:46749791-46780829
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:196 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46749000-46749800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr17:46749000-46749800 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
3 chr17:46749200-46749800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr17:46749200-46749800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
5 chr17:46749200-46749800 Bivalent/Poised TSS Fetal Lung lung
6 chr17:46749200-46749800 Bivalent/Poised TSS Right Atrium heart
7 chr17:46749200-46749800 Bivalent Enhancer Stomach Mucosa stomach
8 chr17:46749400-46749800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr17:46749400-46749800 Enhancers Placenta Placenta
10 chr17:46749400-46749800 Active TSS Rectal Smooth Muscle rectum
11 chr17:46749600-46749800 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr17:46749600-46749800 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
13 chr17:46749600-46749800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
14 chr17:46749600-46749800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr17:46749600-46749800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
16 chr17:46749600-46749800 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
17 chr17:46749600-46749800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
18 chr17:46749600-46749800 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
19 chr17:46749600-46749800 Enhancers Brain Hippocampus Middle brain
20 chr17:46749600-46749800 Enhancers Colon Smooth Muscle Colon
21 chr17:46749600-46749800 Enhancers Duodenum Mucosa Duodenum
22 chr17:46749600-46749800 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr17:46749600-46749800 Bivalent Enhancer Fetal Muscle Trunk muscle
24 chr17:46749600-46749800 Bivalent Enhancer Fetal Muscle Leg muscle
25 chr17:46749600-46749800 Active TSS Rectal Mucosa Donor 29 rectum
26 chr17:46749600-46749800 Enhancers A549 lung
27 chr17:46749600-46749800 Enhancers Hela-S3 cervix
28 chr17:46749600-46749800 Bivalent Enhancer HepG2 liver
29 chr17:46749600-46749800 Enhancers NHEK skin
30 chr17:46749600-46749800 Enhancers NHLF lung
31 chr17:46749600-46750000 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
32 chr17:46749600-46750000 Enhancers Brain Substantia Nigra brain
33 chr17:46749600-46750000 Bivalent Enhancer Fetal Stomach stomach
34 chr17:46749600-46751400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr17:46749600-46752800 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr17:46749800-46750000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr17:46749800-46750000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr17:46749800-46750000 Bivalent Enhancer Adipose Nuclei Adipose
39 chr17:46749800-46755400 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr17:46749800-46755600 Weak transcription A549 lung
41 chr17:46750000-46755400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr17:46752800-46753000 Bivalent Enhancer H1 Cell Line embryonic stem cell
43 chr17:46752800-46753600 Enhancers Rectal Mucosa Donor 31 rectum
44 chr17:46753600-46755600 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr17:46754800-46755000 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
46 chr17:46755000-46755400 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
47 chr17:46755000-46755800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr17:46755000-46756000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
49 chr17:46755400-46755600 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
50 chr17:46755400-46755600 Bivalent/Poised TSS H1 Cell Line embryonic stem cell

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