Variant report

Variant	nsv578744
Chromosome Location	chr19:18380072-18392873
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2688)
CpG islands
(count:1222)
Chromatin interactive
region (count:161)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2688 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:18392060-18392633	K562	blood:	n/a	n/a
2	ARID3A	chr19:18391176-18391455	K562	blood:	n/a	n/a
3	ARID3A	chr19:18389818-18390682	HepG2	liver:	n/a	n/a
4	ARID3A	chr19:18392371-18393431	HepG2	liver:	n/a	n/a
5	ARID3A	chr19:18383373-18383418	HepG2	liver:	n/a	n/a
6	ARID3A	chr19:18390153-18390869	K562	blood:	n/a	n/a
7	ARID3A	chr19:18385374-18386212	HepG2	liver:	n/a	n/a
8	ARID3A	chr19:18389512-18389527	K562	blood:	n/a	n/a
9	ATF1	chr19:18385690-18385962	K562	blood:	n/a	n/a
10	ATF1	chr19:18392118-18392822	K562	blood:	n/a	chr19:18392621-18392635
11	ATF2	chr19:18391185-18391577	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr19:18392068-18393380	GM12878	blood:	n/a	chr19:18392621-18392635 chr19:18392512-18392523
13	ATF2	chr19:18392092-18392709	GM12878	blood:	n/a	chr19:18392621-18392635 chr19:18392512-18392523
14	ATF2	chr19:18392818-18393296	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr19:18391203-18391608	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr19:18390026-18391113	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr19:18390189-18390978	GM12878	blood:	n/a	n/a
18	ATF2	chr19:18392820-18393104	GM12878	blood:	n/a	n/a
19	ATF2	chr19:18390173-18391631	GM12878	blood:	n/a	n/a
20	ATF2	chr19:18388966-18389246	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF2	chr19:18391722-18393301	H1-hESC	embryonic stem cell:	n/a	chr19:18392621-18392635 chr19:18392512-18392523
22	ATF2	chr19:18392192-18392765	H1-hESC	embryonic stem cell:	n/a	chr19:18392621-18392635 chr19:18392512-18392523
23	ATF2	chr19:18389710-18390929	H1-hESC	embryonic stem cell:	n/a	n/a
24	ATF3	chr19:18392169-18392754	A549	lung:	n/a	chr19:18392510-18392521 chr19:18392622-18392633 chr19:18392511-18392524 chr19:18392508-18392522 chr19:18392625-18392633 chr19:18392619-18392633 chr19:18392621-18392632 chr19:18392625-18392632
25	ATF3	chr19:18392321-18392710	K562	blood:	n/a	chr19:18392510-18392521 chr19:18392622-18392633 chr19:18392511-18392524 chr19:18392508-18392522 chr19:18392625-18392633 chr19:18392619-18392633 chr19:18392621-18392632 chr19:18392625-18392632
26	ATF3	chr19:18385558-18386074	K562	blood:	n/a	n/a
27	ATF3	chr19:18390225-18390732	K562	blood:	n/a	n/a
28	ATF3	chr19:18392034-18392791	K562	blood:	n/a	chr19:18392510-18392521 chr19:18392622-18392633 chr19:18392511-18392524 chr19:18392508-18392522 chr19:18392625-18392633 chr19:18392619-18392633 chr19:18392621-18392632 chr19:18392625-18392632
29	ATF3	chr19:18390085-18390652	A549	lung:	n/a	n/a
30	ATF3	chr19:18385669-18385968	K562	blood:	n/a	n/a
31	BACH1	chr19:18386570-18386613	K562	blood:	n/a	n/a
32	BACH1	chr19:18392508-18393259	H1-hESC	embryonic stem cell:	n/a	n/a
33	BACH1	chr19:18389628-18391029	K562	blood:	n/a	n/a
34	BACH1	chr19:18392527-18392902	K562	blood:	n/a	n/a
35	BACH1	chr19:18390820-18391514	H1-hESC	embryonic stem cell:	n/a	n/a
36	BATF	chr19:18392281-18392766	GM12878	blood:	n/a	n/a
37	BCL11A	chr19:18392341-18392753	GM12878	blood:	n/a	chr19:18392420-18392433
38	BCL3	chr19:18392618-18393306	A549	lung:	n/a	n/a
39	BCL3	chr19:18385289-18386030	A549	lung:	n/a	n/a
40	BCL3	chr19:18390091-18390711	A549	lung:	n/a	n/a
41	BCL3	chr19:18392132-18392771	K562	blood:	n/a	chr19:18392420-18392433
42	BCL3	chr19:18392203-18392791	GM12878	blood:	n/a	chr19:18392420-18392433
43	BCL3	chr19:18391930-18392785	GM12878	blood:	n/a	chr19:18392420-18392433
44	BCL3	chr19:18392729-18393334	A549	lung:	n/a	n/a
45	BCL3	chr19:18391111-18391560	A549	lung:	n/a	n/a
46	BCLAF1	chr19:18390076-18390934	GM12878	blood:	n/a	n/a
47	BCLAF1	chr19:18391163-18391708	GM12878	blood:	n/a	n/a
48	BCLAF1	chr19:18390124-18391491	K562	blood:	n/a	n/a
49	BCLAF1	chr19:18391797-18392794	GM12878	blood:	n/a	chr19:18392420-18392433
50	BCLAF1	chr19:18391857-18393449	GM12878	blood:	n/a	chr19:18392420-18392433

(count:1222 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:18391832-18391882	ECC-1	luminal epithelium:	n/a
2	chr19:18389488-18389538	BE2_C	brain:	n/a
3	chr19:18391832-18391882	ECC-1	luminal epithelium:	n/a
4	chr19:18389488-18389538	BE2_C	brain:	n/a
5	chr19:18390607-18390657	HL-60	blood:	n/a
6	chr19:18385930-18385980	HepG2	liver:	n/a
7	chr19:18392866-18392916	GM19239	blood:	n/a
8	chr19:18385244-18385294	AG09309	skin:	n/a
9	chr19:18385244-18385294	H1-hESC	embryonic stem cell:	embryo
10	chr19:18392866-18392916	HRCEpiC	kidney:	n/a
11	chr19:18385409-18385459	AG09309	skin:	n/a
12	chr19:18385502-18385552	MCF10A-Er-Src	breast:	n/a
13	chr19:18385502-18385552	Caco-2	colon:	n/a
14	chr19:18385502-18385552	HCM	heart:	n/a
15	chr19:18385672-18385722	HRPEpiC	eye:	n/a
16	chr19:18392540-18392590	NHBE	bronchial:	n/a
17	chr19:18385502-18385552	HRCEpiC	kidney:	n/a
18	chr19:18391883-18391933	NT2-D1	testis:	n/a
19	chr19:18389488-18389538	SK-N-SH	brain:	n/a
20	chr19:18385672-18385722	ProgFib	skin:	n/a
21	chr19:18391301-18391351	HCPEpiC	choroid plexus:	n/a
22	chr19:18383319-18383369	HNPCEpiC	eye:	n/a
23	chr19:18391883-18391933	ECC-1	luminal epithelium:	n/a
24	chr19:18385930-18385980	Hepatocyte	liver:	n/a
25	chr19:18392551-18392601	AG10803	skin:	n/a
26	chr19:18385244-18385294	GM19239	blood:	n/a
27	chr19:18391301-18391351	HCF	heart:	n/a
28	chr19:18391301-18391351	HAEpiC	amniotic membrane:	n/a
29	chr19:18391832-18391882	HAEpiC	amniotic membrane:	n/a
30	chr19:18385502-18385552	SAEC	small airway:	n/a
31	chr19:18392540-18392590	AG09309	skin:	n/a
32	chr19:18385724-18385774	IMR90	lung:	fetal
33	chr19:18389488-18389538	AG10803	skin:	n/a
34	chr19:18392554-18392604	GM19239	blood:	n/a
35	chr19:18385672-18385722	HPAEpiC	pulmonary alveolar:	n/a
36	chr19:18386421-18386471	HL-60	blood:	n/a
37	chr19:18392866-18392916	PANC-1	pancreas:	n/a
38	chr19:18392540-18392590	NT2-D1	testis:	n/a
39	chr19:18389488-18389538	NH-A	brain:	n/a
40	chr19:18385409-18385459	HCF	heart:	n/a
41	chr19:18385244-18385294	SK-N-SH	brain:	n/a
42	chr19:18391301-18391351	HRCEpiC	kidney:	n/a
43	chr19:18391832-18391882	HMEC	breast:	n/a
44	chr19:18390991-18391041	HL-60	blood:	n/a
45	chr19:18390991-18391041	NB4	blood:	n/a
46	chr19:18386421-18386471	Hepatocyte	liver:	n/a
47	chr19:18392866-18392916	HCM	heart:	n/a
48	chr19:18392554-18392604	ECC-1	luminal epithelium:	n/a
49	chr19:18392551-18392601	HIPEpiC	eye:	n/a
50	chr19:18383319-18383369	HIPEpiC	eye:	n/a

(count:161 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr19:18303093..18307365-chr19:18386584..18393500,10	K562	blood:
2	chr19:18392013..18392940-chr21:33031666..33032209,2	HCT-116	colon:
3	chr19:18391746..18392429-chr3:194039980..194040635,2	Hela-S3	cervix:
4	chr19:18313702..18316146-chr19:18389721..18392001,2	MCF-7	breast:
5	chr19:18232174..18234032-chr19:18387928..18389889,2	K562	blood:
6	chr19:18367098..18369243-chr19:18385751..18387528,2	MCF-7	breast:
7	chr19:18390025..18394312-chr19:18496571..18499733,6	MCF-7	breast:
8	chr19:18389875..18390480-chr19:18438810..18439374,3	MCF-7	breast:
9	chr19:18314296..18317366-chr19:18383748..18385809,3	K562	blood:
10	chr19:18337559..18339091-chr19:18388443..18390350,2	MCF-7	breast:
11	chr19:18383371..18384902-chr19:18527058..18529406,2	K562	blood:
12	chr19:18391743..18392810-chr6:30710116..30710770,3	Hela-S3	cervix:
13	chr19:18391626..18394860-chr19:18506004..18508591,3	K562	blood:
14	chr19:18391974..18392588-chr6:31782500..31783099,2	Hela-S3	cervix:
15	chr10:105420998..105421599-chr19:18391667..18392312,2	Hela-S3	cervix:
16	chr19:18389169..18391132-chr19:18534059..18535898,2	K562	blood:
17	chr19:18385174..18387255-chr19:18528960..18531893,2	MCF-7	breast:
18	chr19:18388413..18390013-chr19:18483305..18484834,2	MCF-7	breast:
19	chr19:18234013..18236269-chr19:18390865..18392530,3	MCF-7	breast:
20	chr19:18300044..18302631-chr19:18389476..18391618,2	K562	blood:
21	chr1:107599220..107600047-chr19:18392199..18392830,2	Hela-S3	cervix:
22	chr19:18391645..18392776-chr3:149094513..149095492,3	Hela-S3	cervix:
23	chr19:18260692..18269532-chr19:18383927..18395911,19	K562	blood:
24	chr19:18276990..18278607-chr19:18389377..18392205,2	K562	blood:
25	chr19:18301148..18305001-chr19:18389528..18394862,10	MCF-7	breast:
26	chr19:18388991..18389671-chr5:42992257..42993081,2	Hela-S3	cervix:
27	chr12:105629542..105630454-chr19:18392234..18393176,2	Hela-S3	cervix:
28	chr19:18392129..18392798-chr5:6632667..6633278,2	Hela-S3	cervix:
29	chr19:18387676..18394124-chr19:18495437..18503905,30	K562	blood:
30	chr19:18391675..18392417-chr2:196521890..196522480,2	Hela-S3	cervix:
31	chr19:18388963..18390088-chr19:18434096..18435108,4	MCF-7	breast:
32	chr17:49243163..49244062-chr19:18391945..18392559,2	HCT-116	colon:
33	chr19:18391400..18392944-chr19:18520489..18523439,2	MCF-7	breast:
34	chr19:18384527..18386649-chr19:18506859..18509715,2	K562	blood:
35	chr19:18390145..18394362-chr19:18451018..18457221,11	MCF-7	breast:
36	chr19:12903017..12903886-chr19:18391760..18392334,2	Hela-S3	cervix:
37	chr11:62608551..62609631-chr19:18392125..18393216,3	NB4	blood:
38	chr19:18262015..18264258-chr19:18383927..18386552,2	K562	blood:
39	chr19:18368439..18371351-chr19:18378949..18380455,2	MCF-7	breast:
40	chr19:18389771..18390844-chr19:18438850..18439790,3	K562	blood:
41	chr19:18388611..18389307-chrX:21958336..21959275,2	Hela-S3	cervix:
42	chr19:18314296..18317431-chr19:18383748..18386421,3	K562	blood:
43	chr19:18388723..18391469-chr19:18447700..18450655,3	MCF-7	breast:
44	chr1:17222277..17223183-chr19:18391952..18392489,2	Hela-S3	cervix:
45	chr19:18391696..18392343-chr3:138327465..138328374,2	Hela-S3	cervix:
46	chr19:18390778..18393256-chr19:55897402..55899140,2	MCF-7	breast:
47	chr19:18391915..18392729-chr9:91933226..91933771,2	Hela-S3	cervix:
48	chr1:155197037..155198006-chr19:18392015..18392606,2	Hela-S3	cervix:
49	chr19:18389884..18390601-chr2:71221403..71222099,2	Hela-S3	cervix:
50	chr19:18387663..18390272-chr19:18513098..18515988,2	K562	blood:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-JUND-1	chr19:18380276-18380397	NONHSAT062952
2	lnc-PGPEP1-5	chr19:18392659-18393560	NONHSAT062954
3	lnc-JUND-1	chr19:18385213-18385240	NONHSAT062952
4	lnc-JUND-1	chr19:18380276-18380397	NONHSAT062951
5	lnc-JUND-1	chr19:18385213-18385240	NONHSAT062951

No data

Variant related genes	Relation type
KIAA1683	TF binding region
JUND	TF binding region
MIR3188	TF binding region
KIAA1683	CpG island
JUND	CpG island
MIR3188	CpG island
ENSG00000163660	chromatin interactions
ENSG00000254469	chromatin interactions
ENSG00000099308	chromatin interactions
ENSG00000207005	chromatin interactions
ENSG00000196950	chromatin interactions
ENSG00000157637	chromatin interactions
ENSG00000130522	chromatin interactions
ENSG00000198890	chromatin interactions
ENSG00000106211	chromatin interactions
ENSG00000256989	chromatin interactions
ENSG00000272273	chromatin interactions
ENSG00000141232	chromatin interactions
ENSG00000165476	chromatin interactions
ENSG00000243678	chromatin interactions
ENSG00000130517	chromatin interactions
ENSG00000228384	chromatin interactions
ENSG00000198625	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000075142	chromatin interactions
ENSG00000130363	chromatin interactions
ENSG00000112658	chromatin interactions
ENSG00000102172	chromatin interactions
ENSG00000105647	chromatin interactions
ENSG00000200463	chromatin interactions
ENSG00000136044	chromatin interactions
ENSG00000175489	chromatin interactions
ENSG00000158470	chromatin interactions
ENSG00000105656	chromatin interactions
ENSG00000196576	chromatin interactions
ENSG00000256982	chromatin interactions
ENSG00000120334	chromatin interactions
ENSG00000105655	chromatin interactions
ENSG00000117593	chromatin interactions
ENSG00000271913	chromatin interactions
ENSG00000108107	chromatin interactions
ENSG00000216490	chromatin interactions
ENSG00000254858	chromatin interactions
ENSG00000228113	chromatin interactions
ENSG00000105640	chromatin interactions
ENSG00000139132	chromatin interactions
ENSG00000105649	chromatin interactions
ENSG00000234509	chromatin interactions
ENSG00000158483	chromatin interactions
ENSG00000142168	chromatin interactions
ENSG00000176410	chromatin interactions
ENSG00000268650	chromatin interactions
ENSG00000113739	chromatin interactions
ENSG00000158234	chromatin interactions
ENSG00000206737	chromatin interactions
ENSG00000213523	chromatin interactions
ENSG00000141526	chromatin interactions
ENSG00000167491	chromatin interactions
ENSG00000012061	chromatin interactions
ENSG00000268173	chromatin interactions
ENSG00000107957	chromatin interactions
ENSG00000168807	chromatin interactions
ENSG00000105650	chromatin interactions
ENSG00000176986	chromatin interactions
ENSG00000249492	chromatin interactions
ENSG00000136925	chromatin interactions
ENSG00000137522	chromatin interactions
ENSG00000273129	chromatin interactions
ENSG00000198113	chromatin interactions
ENSG00000143702	chromatin interactions
ENSG00000236021	chromatin interactions
ENSG00000144043	chromatin interactions
ENSG00000095066	chromatin interactions
ENSG00000258881	chromatin interactions
ENSG00000137312	chromatin interactions
ENSG00000119403	chromatin interactions
ENSG00000182718	chromatin interactions
ENSG00000204390	chromatin interactions
ENSG00000221167	chromatin interactions
ENSG00000130520	chromatin interactions
ENSG00000130513	chromatin interactions
ENSG00000260285	chromatin interactions
ENSG00000163536	chromatin interactions
ENSG00000168906	chromatin interactions
ENSG00000073756	chromatin interactions
ENSG00000143207	chromatin interactions
ENSG00000037474	chromatin interactions
ENSG00000169908	chromatin interactions
ENSG00000259006	chromatin interactions
ENSG00000160766	chromatin interactions
ENSG00000269145	chromatin interactions
ENSG00000127585	chromatin interactions
ENSG00000105643	chromatin interactions
ENSG00000151881	chromatin interactions
ENSG00000163697	chromatin interactions
ENSG00000136937	chromatin interactions
ENSG00000071462	chromatin interactions
ENSG00000105642	chromatin interactions
ENSG00000258947	chromatin interactions
ENSG00000239821	chromatin interactions
ENSG00000187742	chromatin interactions
ENSG00000130511	chromatin interactions
ENSG00000245532	chromatin interactions
ENSG00000264175	chromatin interactions

Extended variants
information (count: 617 )
Associated
traits (count: 59 )

Variant overlapped rSNPs/rCNVs (count:617 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4808776	chr19:18380072-18380073	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs573988449	chr19:18380106-18380107	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs543102192	chr19:18380165-18380166	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs562867284	chr19:18380187-18380188	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs376741227	chr19:18380211-18380212	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs551573904	chr19:18380237-18380238	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs142043005	chr19:18380245-18380246	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs555661482	chr19:18380252-18380253	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs527980442	chr19:18380256-18380257	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs144766838	chr19:18380283-18380284	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
11	rs199847737	chr19:18380288-18380289	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
12	rs200977596	chr19:18380313-18380314	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
13	rs371021725	chr19:18380319-18380320	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
14	rs546947735	chr19:18380323-18380324	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
15	rs374336282	chr19:18380332-18380333	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
16	rs368804751	chr19:18380363-18380364	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
17	rs10406725	chr19:18380414-18380415	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs147384654	chr19:18380415-18380416	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs10406002	chr19:18380481-18380482	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs71886739	chr19:18380483-18380484	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs201844674	chr19:18380497-18380498	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs78882152	chr19:18380498-18380499	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs535898114	chr19:18380502-18380503	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs191764861	chr19:18380512-18380513	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs12459276	chr19:18380542-18380543	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs538811198	chr19:18380604-18380605	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs558792157	chr19:18380606-18380607	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs573006721	chr19:18380607-18380608	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs529774781	chr19:18380666-18380667	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs139511478	chr19:18380708-18380709	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs145562798	chr19:18380718-18380719	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs368836636	chr19:18380729-18380730	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs560158963	chr19:18380740-18380741	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs549553226	chr19:18380800-18380801	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs8103268	chr19:18380815-18380816	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs8102858	chr19:18380842-18380843	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs565922232	chr19:18380861-18380862	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs376819448	chr19:18380862-18380863	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs398034156	chr19:18380888-18380889	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs183930201	chr19:18380890-18380891	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs554612722	chr19:18380898-18380899	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs556051474	chr19:18380964-18380965	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs147716695	chr19:18380970-18380971	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs542687562	chr19:18380998-18380999	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs544784659	chr19:18380999-18381000	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs562963244	chr19:18381083-18381084	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs140037684	chr19:18381154-18381155	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs199590561	chr19:18381169-18381170	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs371943738	chr19:18381207-18381208	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs7256004	chr19:18381278-18381279	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:59)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Follicular lymphoma	20505157	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	20179077	CNVD
Melanoma	18172304	CNVD
Glioblastoma multiforme	21080181	CNVD
Metanephric adenoma	20802469	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16608533	CNVD
Lung cancer	17297452	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Chordoma	18071362	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Urothelial carcinoma	21177765	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Basal cell lymphoma	21115979	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Medullary thyroid carcinoma	18765511	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21364760	CNVD
Mycobacterial infection	18421352	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute monocytic leukemia	16498392	CNVD
Lung cancer	18438408	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Liver carcinoma	19366792	CNVD
Colorectal cancer	19455253	CNVD
Lujan-Fryns syndrom	21521776	CNVD
Breast cancer	20409316	CNVD
Cancer	17160897	CNVD
Cancer	17440070	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	21509527	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:939 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:18348600-18385200	Weak transcription	Right Atrium	heart
2	chr19:18366400-18389400	Weak transcription	Fetal Brain Male	brain
3	chr19:18366600-18385400	Weak transcription	Primary B cells from cord blood	blood
4	chr19:18366600-18385800	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr19:18366600-18390000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr19:18367600-18380400	Strong transcription	Fetal Muscle Leg	muscle
7	chr19:18367600-18381600	Strong transcription	Fetal Intestine Small	intestine
8	chr19:18367800-18380800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
9	chr19:18369600-18380400	Strong transcription	Fetal Muscle Trunk	muscle
10	chr19:18371000-18385400	Weak transcription	HSMMtube	muscle
11	chr19:18372200-18380400	Strong transcription	Ovary	ovary
12	chr19:18373200-18380400	Strong transcription	Primary B cells from peripheral blood	blood
13	chr19:18373400-18380400	Strong transcription	Brain Anterior Caudate	brain
14	chr19:18373400-18380400	Strong transcription	Fetal Brain Female	brain
15	chr19:18373400-18380400	Strong transcription	Fetal Intestine Large	intestine
16	chr19:18373400-18380400	Strong transcription	Lung	lung
17	chr19:18373400-18380800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr19:18373600-18380600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr19:18373800-18380400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr19:18373800-18380400	Strong transcription	Rectal Mucosa Donor 31	rectum
21	chr19:18374400-18380200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr19:18374600-18380400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr19:18374600-18380400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr19:18374600-18381600	Strong transcription	Fetal Stomach	stomach
25	chr19:18374600-18383600	Weak transcription	A549	lung
26	chr19:18374600-18388400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr19:18374800-18380400	Strong transcription	Cortex derived primary cultured neurospheres	brain
28	chr19:18374800-18385200	Weak transcription	H1 Cell Line	embryonic stem cell
29	chr19:18375000-18380400	Strong transcription	Primary T helper cells fromperipheralblood	blood
30	chr19:18375000-18380400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
31	chr19:18375000-18388200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
32	chr19:18375400-18380400	Strong transcription	Brain Inferior Temporal Lobe	brain
33	chr19:18375400-18380400	Strong transcription	Rectal Mucosa Donor 29	rectum
34	chr19:18375600-18380400	Strong transcription	Brain Substantia Nigra	brain
35	chr19:18375600-18386000	Weak transcription	Fetal Kidney	kidney
36	chr19:18376200-18386400	Weak transcription	Pancreatic Islets	Pancreatic Islet
37	chr19:18376400-18384600	Weak transcription	Small Intestine	intestine
38	chr19:18376400-18384800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
39	chr19:18376600-18380600	Strong transcription	NHDF-Ad	bronchial
40	chr19:18377200-18380400	Strong transcription	Spleen	Spleen
41	chr19:18377200-18381000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
42	chr19:18377200-18388800	Weak transcription	Dnd41	blood
43	chr19:18377400-18380400	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr19:18377600-18384400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
45	chr19:18377800-18388800	Weak transcription	Primary hematopoietic stem cells	blood
46	chr19:18378000-18380400	Strong transcription	Thymus	Thymus
47	chr19:18378000-18384400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
48	chr19:18378200-18382400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr19:18378200-18384400	Weak transcription	Duodenum Mucosa	Duodenum
50	chr19:18378200-18384800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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