Variant report

Variant	nsv579111
Chromosome Location	chr19:24595576-24623298
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1666 )
Associated
traits (count: 39 )

Variant overlapped rSNPs/rCNVs (count:1666 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7339742	chr19:24595576-24595577	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs554511449	chr19:24595649-24595650	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs572757131	chr19:24595656-24595657	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs540297688	chr19:24595661-24595662	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs564841968	chr19:24595678-24595679	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs147395309	chr19:24595690-24595691	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs544444631	chr19:24595727-24595728	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs535921849	chr19:24595735-24595736	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs367917752	chr19:24595759-24595760	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs138132272	chr19:24595761-24595762	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs575775608	chr19:24595763-24595764	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs200967687	chr19:24595779-24595780	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs200867806	chr19:24595781-24595782	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs530056065	chr19:24595793-24595794	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs192435952	chr19:24595801-24595802	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs181757852	chr19:24595806-24595807	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs567603441	chr19:24595816-24595817	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs145289393	chr19:24595829-24595830	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs112950801	chr19:24595830-24595831	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs528493848	chr19:24595831-24595832	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs111612409	chr19:24595833-24595834	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs151156608	chr19:24595835-24595836	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs138984218	chr19:24595836-24595837	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs150624633	chr19:24595837-24595838	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs112362779	chr19:24595840-24595841	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs140507642	chr19:24595843-24595844	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs146438322	chr19:24595846-24595847	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs140562983	chr19:24595847-24595848	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs560442058	chr19:24595849-24595850	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs139041585	chr19:24595852-24595853	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs544401034	chr19:24595858-24595859	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs139142421	chr19:24595860-24595861	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs146884226	chr19:24595870-24595871	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs146576806	chr19:24595872-24595873	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs112796066	chr19:24595874-24595875	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs142517940	chr19:24595884-24595885	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs144370384	chr19:24595886-24595887	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs146088421	chr19:24595894-24595895	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs547056069	chr19:24595907-24595908	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs571678847	chr19:24595914-24595915	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs185198226	chr19:24595923-24595924	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs62134475	chr19:24595932-24595933	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs550804462	chr19:24595934-24595935	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs62134476	chr19:24595940-24595941	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs200992652	chr19:24595945-24595946	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs62134477	chr19:24595949-24595950	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs113468439	chr19:24595959-24595960	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs11673369	chr19:24595964-24595965	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs200992530	chr19:24595966-24595967	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs557960487	chr19:24595968-24595969	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:39)

Disease	PMID	Source
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Ductal carcinoma	22052326	CNVD
Cancer	20164920	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Autism	19287141	CNVD
Lung cancer	18438408	CNVD

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:24593600-24596400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr19:24594000-24597000	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
3	chr19:24594200-24603400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
4	chr19:24595800-24602400	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
5	chr19:24596000-24596400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
6	chr19:24597600-24603400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
7	chr19:24598200-24602800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr19:24601200-24601400	ZNF genes & repeats	HUVEC	blood vessel
9	chr19:24601200-24601600	ZNF genes & repeats	NH-A	brain
10	chr19:24601600-24608400	Weak transcription	NH-A	brain
11	chr19:24602000-24603400	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
12	chr19:24615200-24617400	Weak transcription	NH-A	brain
13	chr19:24617400-24617800	ZNF genes & repeats	NH-A	brain
14	chr19:24617800-24619000	Weak transcription	NH-A	brain

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