Variant report

Variant	nsv579511
Chromosome Location	chr19:40132825-40310497
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2381)
CpG islands
(count:1405)
Chromatin interactive
region (count:73)
LncRNA
region (count:11)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2381 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:40256286-40256392	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:40186329-40186749	HepG2	liver:	n/a	n/a
3	ARID3A	chr19:40264545-40264659	HepG2	liver:	n/a	n/a
4	ATF2	chr19:40182851-40183369	GM12878	blood:	n/a	n/a
5	ATF2	chr19:40177332-40177734	GM12878	blood:	n/a	n/a
6	ATF2	chr19:40306982-40307688	GM12878	blood:	n/a	n/a
7	ATF2	chr19:40250299-40250937	GM12878	blood:	n/a	n/a
8	ATF2	chr19:40194765-40195855	GM12878	blood:	n/a	n/a
9	ATF2	chr19:40196409-40196856	GM12878	blood:	n/a	n/a
10	ATF2	chr19:40217452-40218159	GM12878	blood:	n/a	n/a
11	ATF2	chr19:40182800-40183815	GM12878	blood:	n/a	n/a
12	ATF2	chr19:40191755-40192297	GM12878	blood:	n/a	n/a
13	ATF2	chr19:40196400-40196987	GM12878	blood:	n/a	n/a
14	ATF2	chr19:40169348-40171215	GM12878	blood:	n/a	n/a
15	ATF2	chr19:40169169-40171721	GM12878	blood:	n/a	n/a
16	ATF2	chr19:40166454-40167085	GM12878	blood:	n/a	n/a
17	ATF2	chr19:40250271-40250873	GM12878	blood:	n/a	n/a
18	ATF2	chr19:40285607-40286082	GM12878	blood:	n/a	n/a
19	ATF2	chr19:40191735-40192471	GM12878	blood:	n/a	n/a
20	ATF2	chr19:40166517-40167044	GM12878	blood:	n/a	n/a
21	ATF3	chr19:40283522-40283995	A549	lung:	n/a	n/a
22	BACH1	chr19:40243844-40243856	K562	blood:	n/a	n/a
23	BACH1	chr19:40293667-40294041	H1-hESC	embryonic stem cell:	n/a	n/a
24	BACH1	chr19:40256223-40256423	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr19:40181595-40181848	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr19:40220520-40220648	H1-hESC	embryonic stem cell:	n/a	n/a
27	BATF	chr19:40250525-40250763	GM12878	blood:	n/a	n/a
28	BATF	chr19:40299330-40299577	GM12878	blood:	n/a	chr19:40299379-40299387 chr19:40299522-40299532 chr19:40299526-40299536
29	BATF	chr19:40269361-40269668	GM12878	blood:	n/a	n/a
30	BATF	chr19:40243042-40243374	GM12878	blood:	n/a	n/a
31	BATF	chr19:40189256-40189554	GM12878	blood:	n/a	n/a
32	BATF	chr19:40166542-40166952	GM12878	blood:	n/a	n/a
33	BATF	chr19:40285717-40285968	GM12878	blood:	n/a	n/a
34	BATF	chr19:40166440-40167020	GM12878	blood:	n/a	n/a
35	BATF	chr19:40189261-40189535	GM12878	blood:	n/a	n/a
36	BATF	chr19:40169465-40170751	GM12878	blood:	n/a	n/a
37	BATF	chr19:40164543-40164840	GM12878	blood:	n/a	n/a
38	BATF	chr19:40182871-40183555	GM12878	blood:	n/a	chr19:40183116-40183126
39	BATF	chr19:40269416-40269699	GM12878	blood:	n/a	n/a
40	BCL11A	chr19:40309347-40309621	GM12878	blood:	n/a	chr19:40309505-40309514
41	BCL11A	chr19:40199281-40199588	GM12878	blood:	n/a	chr19:40199450-40199459
42	BCL11A	chr19:40285720-40285955	GM12878	blood:	n/a	n/a
43	BCL11A	chr19:40250426-40250814	GM12878	blood:	n/a	n/a
44	BCL11A	chr19:40169661-40170751	GM12878	blood:	n/a	n/a
45	BCL11A	chr19:40195179-40195439	GM12878	blood:	n/a	n/a
46	BCL11A	chr19:40166534-40167022	GM12878	blood:	n/a	chr19:40166845-40166854
47	BCL3	chr19:40196414-40196839	GM12878	blood:	n/a	chr19:40196768-40196777
48	BCL3	chr19:40169586-40170952	GM12878	blood:	n/a	chr19:40169623-40169631
49	BCL3	chr19:40166516-40167084	GM12878	blood:	n/a	chr19:40166845-40166854
50	BCL3	chr19:40227965-40228346	GM12878	blood:	n/a	n/a

(count:1405 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:40168876-40168926	GM06990	blood:	n/a
2	chr19:40276380-40276430	MCF10A-Er-Src	breast:	n/a
3	chr19:40168876-40168926	GM06990	blood:	n/a
4	chr19:40276380-40276430	MCF10A-Er-Src	breast:	n/a
5	chr19:40168876-40168926	GM12892	blood:	n/a
6	chr19:40276380-40276430	MCF-7	breast:	n/a
7	chr19:40276380-40276430	GM12878	blood:	n/a
8	chr19:40169912-40169962	HUVEC	blood vessel:	n/a
9	chr19:40229215-40229265	Jurkat	blood:	n/a
10	chr19:40195142-40195192	SK-N-MC	brain:	n/a
11	chr19:40276380-40276430	HCPEpiC	choroid plexus:	n/a
12	chr19:40169912-40169962	HAEpiC	amniotic membrane:	n/a
13	chr19:40229766-40229816	HUVEC	blood vessel:	n/a
14	chr19:40193890-40193940	GM06990	blood:	n/a
15	chr19:40276380-40276430	NHDF-neo	bronchial:	n/a
16	chr19:40229266-40229316	AG10803	skin:	n/a
17	chr19:40229266-40229316	GM19239	blood:	n/a
18	chr19:40193890-40193940	HRE	kidney:	n/a
19	chr19:40229766-40229816	BE2_C	brain:	n/a
20	chr19:40266546-40266596	Hepatocyte	liver:	n/a
21	chr19:40227949-40227999	HEEpiC	esophagus:	n/a
22	chr19:40168558-40168608	SAEC	small airway:	n/a
23	chr19:40266791-40266841	LNCaP	prostate:	n/a
24	chr19:40267103-40267153	Hepatocyte	liver:	n/a
25	chr19:40228820-40228870	HCPEpiC	choroid plexus:	n/a
26	chr19:40267283-40267333	MCF10A-Er-Src	breast:	n/a
27	chr19:40227949-40227999	AG09319	gingival:	n/a
28	chr19:40229215-40229265	HCT-116	colon:	n/a
29	chr19:40267103-40267153	SKMC	muscle:	n/a
30	chr19:40227949-40227999	HCM	heart:	n/a
31	chr19:40276380-40276430	HL-60	blood:	n/a
32	chr19:40174352-40174402	BE2_C	brain:	n/a
33	chr19:40229766-40229816	HL-60	blood:	n/a
34	chr19:40266546-40266596	RPTEC	kidney:	n/a
35	chr19:40229366-40229416	A549	lung:	n/a
36	chr19:40266546-40266596	GM06990	blood:	n/a
37	chr19:40168558-40168608	SK-N-SH	brain:	n/a
38	chr19:40195142-40195192	GM12878	blood:	n/a
39	chr19:40267283-40267333	Hela-S3	cervix:	n/a
40	chr19:40168876-40168926	Jurkat	blood:	n/a
41	chr19:40229366-40229416	Caco-2	colon:	n/a
42	chr19:40267103-40267153	AG04450	lung:	fetal
43	chr19:40169912-40169962	H1-hESC	embryonic stem cell:	embryo
44	chr19:40229266-40229316	HAEpiC	amniotic membrane:	n/a
45	chr19:40266546-40266596	AG04450	lung:	fetal
46	chr19:40195983-40196033	HCPEpiC	choroid plexus:	n/a
47	chr19:40229266-40229316	SAEC	small airway:	n/a
48	chr19:40229766-40229816	NH-A	brain:	n/a
49	chr19:40174352-40174402	SK-N-SH_RA	brain:	n/a
50	chr19:40174352-40174402	HRPEpiC	eye:	n/a

(count:73 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr19:40306929..40308532-chr19:40309647..40311721,2	MCF-7	breast:
2	chr19:40255355..40257924-chr19:40332588..40334816,2	MCF-7	breast:
3	chr19:40172219..40174410-chr19:40181019..40183380,2	MCF-7	breast:
4	chr19:39988438..39989161-chr19:40162366..40162932,2	K562	blood:
5	chr19:40305000..40306597-chr19:40314975..40317382,2	K562	blood:
6	chr19:40255527..40257517-chr19:40266720..40268234,2	K562	blood:
7	chr19:40283298..40284231-chr19:40334333..40335337,5	MCF-7	breast:
8	chr19:40191402..40192980-chr19:40193546..40196170,2	K562	blood:
9	chr19:40164310..40165291-chr19:40476366..40477083,2	MCF-7	breast:
10	chr19:40163659..40164641-chr19:40256992..40257878,2	MCF-7	breast:
11	chr19:40285675..40287389-chr19:40329469..40332136,2	MCF-7	breast:
12	chr19:40172219..40174410-chr19:40181019..40183380,2	MCF-7	breast:
13	chr19:40041871..40042653-chr19:40162390..40162892,2	MCF-7	breast:
14	chr19:40168776..40170659-chr19:40171070..40173926,2	MCF-7	breast:
15	chr19:40301084..40303367-chr19:40305267..40308051,2	K562	blood:
16	chr19:40164188..40165085-chr19:40256246..40256847,2	MCF-7	breast:
17	chr19:40295840..40298272-chr19:40322727..40325020,2	MCF-7	breast:
18	chr19:40041798..40042719-chr19:40162291..40163385,9	MCF-7	breast:
19	chr19:40309497..40312112-chr19:40336240..40338482,2	MCF-7	breast:
20	chr19:39988198..39988763-chr19:40162454..40163227,2	MCF-7	breast:
21	chr19:40301084..40303367-chr19:40305267..40308051,2	K562	blood:
22	chr19:40293371..40296306-chr19:40300428..40302557,2	K562	blood:
23	chr19:40245612..40247298-chr19:40255835..40257856,2	MCF-7	breast:
24	chr19:40307426..40309914-chr19:40328224..40330474,2	K562	blood:
25	chr19:40306242..40311061-chr19:40311644..40314932,5	K562	blood:
26	chr19:40264679..40266808-chr19:40276400..40277975,2	K562	blood:
27	chr19:40264679..40266808-chr19:40276400..40277975,2	K562	blood:
28	chr19:39925057..39927468-chr19:40150682..40153479,2	K562	blood:
29	chr19:40055301..40057183-chr19:40147250..40149926,2	MCF-7	breast:
30	chr12:31226694..31227233-chr19:40172228..40172728,2	HCT-116	colon:
31	chr19:40298507..40299507-chr7:137584024..137584719,2	MCF-7	breast:
32	chr19:40291125..40292741-chr19:40294358..40296178,2	K562	blood:
33	chr19:40300536..40303367-chr19:40305267..40307931,2	K562	blood:
34	chr19:40294943..40296744-chr19:40337305..40340033,2	MCF-7	breast:
35	chr19:40296262..40298626-chr19:40313380..40316915,4	MCF-7	breast:
36	chr19:40163659..40164641-chr19:40256992..40257878,2	MCF-7	breast:
37	chr19:40283432..40284233-chr19:40334291..40335341,3	MCF-7	breast:
38	chr19:40245612..40247298-chr19:40255835..40257856,2	MCF-7	breast:
39	chr19:40245917..40247942-chr19:40249485..40251835,2	K562	blood:
40	chr19:40164964..40166897-chr19:40168193..40170501,2	K562	blood:
41	chr19:40164188..40165085-chr19:40256246..40256847,2	MCF-7	breast:
42	chr19:40256350..40257493-chr19:40334257..40335289,4	MCF-7	breast:
43	chr19:40293371..40296306-chr19:40300428..40302557,2	K562	blood:
44	chr19:40283625..40284290-chr19:40332717..40333386,3	MCF-7	breast:
45	chr19:40245917..40247942-chr19:40249485..40251835,2	K562	blood:
46	chr19:40187755..40190590-chr19:40198556..40200389,2	MCF-7	breast:
47	chr19:40041783..40042891-chr19:40162333..40163330,4	K562	blood:
48	chr19:40218825..40222024-chr19:40225949..40228732,3	K562	blood:
49	chr19:40219606..40222689-chr19:40225665..40231232,5	K562	blood:
50	chr19:40168776..40170659-chr19:40171070..40173926,2	MCF-7	breast:

(count:11 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LGALS14-1	chr19:40172073-40172149	NR_034156
2	lnc-LGALS14-1	chr19:40175350-40175447	NR_034156
3	lnc-LGALS14-1	chr19:40172638-40172848	NR_034156
4	lnc-LGALS14-1	chr19:40185104-40185217	ENSG00000226025
5	lnc-LGALS14-1	chr19:40170014-40170074	NR_034156
6	lnc-LGALS14-1	chr19:40174127-40174403	NR_034156
7	lnc-LGALS14-1	chr19:40176193-40176292	NR_034156
8	lnc-LGALS14-1	chr19:40176825-40177013	NR_034156
9	lnc-LGALS14-1	chr19:40175942-40176058	NR_034156
10	lnc-LGALS14-1	chr19:40175884-40176058	ENSG00000226025
11	lnc-LGALS16-1	chr19:40132792-40133041	NONHSAT066318

No data

Variant related genes	Relation type
LGALS16	TF binding region
ENSG00000268088	TF binding region
ENSG00000268243	TF binding region
ENSG00000269460	TF binding region
LGALS14	TF binding region
LEUTX	TF binding region
CLC	TF binding region
ENSG00000226025	TF binding region
ENSG00000240320	TF binding region
LGALS16	CpG island
ENSG00000268088	CpG island
ENSG00000268243	CpG island
ENSG00000269460	CpG island
LGALS14	CpG island
LEUTX	CpG island
CLC	CpG island
ENSG00000226025	CpG island
ENSG00000240320	CpG island
ENSG00000013573	chromatin interactions
ENSG00000105202	chromatin interactions
ENSG00000105198	chromatin interactions
ENSG00000006659	chromatin interactions
ENSG00000105204	chromatin interactions
ENSG00000240320	chromatin interactions
ENSG00000105205	chromatin interactions
ENSG00000105193	chromatin interactions
ENSG00000196235	chromatin interactions
ENSG00000226025	chromatin interactions
ENSG00000245614	chromatin interactions
ENSG00000013275	chromatin interactions
ENSG00000213921	chromatin interactions

Extended variants
information (count: 6273 )
Associated
traits (count: 73 )

Variant overlapped rSNPs/rCNVs (count:6273 , 50 per page) page: 1 2 3 4 5 6 7 ... 126

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2270028	chr19:40132825-40132826	Enhancers Bivalent Enhancer	TF binding region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs370540139	chr19:40132842-40132843	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
3	rs537944477	chr19:40132843-40132844	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
4	rs114193401	chr19:40132900-40132901	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
5	rs533816611	chr19:40132918-40132919	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
6	rs190282989	chr19:40132923-40132924	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
7	rs545710048	chr19:40132941-40132942	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
8	rs2270029	chr19:40133000-40133001	Enhancers Bivalent Enhancer	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs138295341	chr19:40133002-40133003	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
10	rs375980020	chr19:40133009-40133010	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
11	rs7249348	chr19:40133069-40133070	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs537386743	chr19:40133100-40133101	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs549894107	chr19:40133101-40133102	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs1156815	chr19:40133192-40133193	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs532186467	chr19:40133196-40133197	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs181253429	chr19:40133229-40133230	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs565794200	chr19:40133323-40133324	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs534200362	chr19:40133326-40133327	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs78167081	chr19:40133327-40133328	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs567310296	chr19:40133386-40133387	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs143304935	chr19:40133422-40133423	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs556215579	chr19:40133423-40133424	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs578138065	chr19:40133426-40133427	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs111752670	chr19:40133433-40133434	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs1156816	chr19:40133438-40133439	Enhancers Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs572606170	chr19:40133447-40133448	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs185081875	chr19:40133472-40133473	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs188203530	chr19:40133490-40133491	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs16973555	chr19:40133530-40133531	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs60763119	chr19:40133563-40133564	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs543570666	chr19:40133569-40133570	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs374755040	chr19:40133579-40133580	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs564801120	chr19:40133582-40133583	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs180996204	chr19:40133621-40133622	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs141972757	chr19:40133634-40133635	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs559494107	chr19:40133666-40133667	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs529975636	chr19:40133678-40133679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs142879556	chr19:40133681-40133682	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs535076505	chr19:40133690-40133691	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs146264285	chr19:40133691-40133692	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs60962641	chr19:40133698-40133699	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs141713665	chr19:40133732-40133733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs185381635	chr19:40133737-40133738	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs371453651	chr19:40133756-40133757	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs554119989	chr19:40133781-40133782	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs373654637	chr19:40133796-40133797	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs566255562	chr19:40133835-40133836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs572178585	chr19:40133935-40133936	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs7253489	chr19:40133955-40133956	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs6508893	chr19:40133958-40133959	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:73)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Wilms tumour	21544195	CNVD
Mental retardation	19951919	CNVD
19q13.11 deletion syndrome	22378287	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Ovarian neoplasms	16753589	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Lung cancer	21569311	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	19029149	CNVD
Breast cancer	20409316	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Renal cell carcinoma	18765545	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Genital abnormality	22378287	CNVD
Hypospadia	22378287	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Astrocytoma	22246337	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD

Chromatin state (count:916 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:40131800-40133600	Enhancers	Pancreatic Islets	Pancreatic Islet
2	chr19:40132000-40133400	Enhancers	HepG2	liver
3	chr19:40132200-40133000	Bivalent Enhancer	A549	lung
4	chr19:40132600-40133200	Enhancers	Placenta	Placenta
5	chr19:40133200-40151200	Weak transcription	Placenta	Placenta
6	chr19:40146800-40147000	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr19:40147000-40147200	Flanking Bivalent TSS/Enh	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr19:40148600-40149400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr19:40150600-40151200	Bivalent Enhancer	GM12878-XiMat	blood
10	chr19:40152200-40153000	Enhancers	Primary T cells from cord blood	blood
11	chr19:40161200-40162600	Enhancers	H9 Cell Line	embryonic stem cell
12	chr19:40161200-40162600	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr19:40161200-40162600	Enhancers	iPS-20b Cell Line	embryonic stem cell
14	chr19:40161200-40162600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr19:40161200-40162800	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr19:40161200-40162800	Enhancers	HUES48 Cell Line	embryonic stem cell
17	chr19:40161200-40162800	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr19:40161200-40162800	Enhancers	iPS-15b Cell Line	embryonic stem cell
19	chr19:40161400-40162600	Enhancers	H1 Cell Line	embryonic stem cell
20	chr19:40161400-40162800	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr19:40161800-40162000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
22	chr19:40162400-40162600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr19:40162400-40162600	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
24	chr19:40162400-40162600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr19:40162400-40162600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr19:40162400-40162600	Enhancers	Brain Hippocampus Middle	brain
27	chr19:40162400-40162800	Enhancers	Pancreatic Islets	Pancreatic Islet
28	chr19:40162400-40163200	Enhancers	Skeletal Muscle Female	skeletal muscle
29	chr19:40162400-40163200	Enhancers	GM12878-XiMat	blood
30	chr19:40162400-40164600	Enhancers	Primary T helper naive cells from peripheral blood	blood
31	chr19:40162400-40164600	Enhancers	Primary T helper cells PMA-I stimulated	--
32	chr19:40162600-40162800	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
33	chr19:40162600-40162800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr19:40162600-40163600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
35	chr19:40162600-40164200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
36	chr19:40162600-40164600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
37	chr19:40162600-40164600	Enhancers	Primary T killer memory cells from peripheral blood	blood
38	chr19:40162600-40169600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr19:40162800-40163000	Enhancers	Skeletal Muscle Male	skeletal muscle
40	chr19:40162800-40163000	Bivalent Enhancer	A549	lung
41	chr19:40162800-40163800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr19:40162800-40164200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr19:40162800-40164400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
44	chr19:40162800-40164600	Enhancers	Primary T helper cells fromperipheralblood	blood
45	chr19:40162800-40166800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
46	chr19:40163000-40164200	Enhancers	Primary T cells fromperipheralblood	blood
47	chr19:40163200-40163400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
48	chr19:40163200-40164200	Weak transcription	GM12878-XiMat	blood
49	chr19:40163200-40168200	Weak transcription	Skeletal Muscle Female	skeletal muscle
50	chr19:40163400-40164200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood

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