Variant report

Variant nsv579594
Chromosome Location chr19:41442165-41494891
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:209 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41432200-41447600 Weak transcription Liver Liver
2 chr19:41438800-41444000 Weak transcription Fetal Intestine Large intestine
3 chr19:41439200-41447800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr19:41439200-41448000 Weak transcription Stomach Mucosa stomach
5 chr19:41440600-41442400 Weak transcription Lung lung
6 chr19:41442000-41442400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
7 chr19:41442000-41445400 Strong transcription Fetal Intestine Small intestine
8 chr19:41442400-41442600 Strong transcription Lung lung
9 chr19:41442400-41451400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr19:41442600-41442800 Bivalent Enhancer Stomach Smooth Muscle stomach
11 chr19:41442600-41450200 Weak transcription Lung lung
12 chr19:41444000-41444800 Strong transcription Fetal Intestine Large intestine
13 chr19:41444400-41445400 Bivalent Enhancer A549 lung
14 chr19:41444800-41455800 Weak transcription Fetal Intestine Large intestine
15 chr19:41445400-41450200 Weak transcription Fetal Intestine Small intestine
16 chr19:41445800-41449200 Enhancers HUVEC blood vessel
17 chr19:41446400-41446600 Enhancers A549 lung
18 chr19:41446600-41446800 Flanking Active TSS A549 lung
19 chr19:41446800-41447200 Enhancers A549 lung
20 chr19:41447200-41447600 Bivalent Enhancer A549 lung
21 chr19:41447400-41448000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr19:41447600-41447800 Flanking Bivalent TSS/Enh A549 lung
23 chr19:41447600-41448200 Strong transcription Liver Liver
24 chr19:41447800-41448200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr19:41447800-41448200 Bivalent Enhancer A549 lung
26 chr19:41447800-41448200 Bivalent Enhancer K562 blood
27 chr19:41448200-41449600 Weak transcription Liver Liver
28 chr19:41449600-41451800 Strong transcription Liver Liver
29 chr19:41450200-41450400 Bivalent Enhancer Esophagus oesophagus
30 chr19:41450200-41450600 ZNF genes & repeats Lung lung
31 chr19:41450200-41450800 Strong transcription Fetal Intestine Small intestine
32 chr19:41450800-41451800 ZNF genes & repeats Fetal Intestine Small intestine
33 chr19:41451400-41451800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
34 chr19:41451400-41452200 Flanking Active TSS K562 blood
35 chr19:41451800-41452200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr19:41451800-41455200 Weak transcription Liver Liver
37 chr19:41451800-41456200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr19:41451800-41456200 Weak transcription Fetal Intestine Small intestine
39 chr19:41452200-41452400 Enhancers K562 blood
40 chr19:41453800-41458200 Weak transcription Right Atrium heart
41 chr19:41456200-41456400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
42 chr19:41459600-41460800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
43 chr19:41460000-41460800 ZNF genes & repeats Brain Hippocampus Middle brain
44 chr19:41460000-41461600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr19:41460200-41460400 ZNF genes & repeats A549 lung
46 chr19:41460200-41461400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
47 chr19:41464600-41464800 Enhancers Fetal Intestine Small intestine
48 chr19:41464800-41466400 Weak transcription Fetal Intestine Small intestine
49 chr19:41465200-41466600 Enhancers Esophagus oesophagus
50 chr19:41465400-41465800 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell

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