Variant report
Variant | nsv579691 |
---|---|
Chromosome Location | chr19:43322065-43774853 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:5978)
- CpG islands (count:3177)
- Chromatin interactive region (count:6)
- LncRNA region (count:77)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ATF1 | chr19:43733581-43733686 | K562 | blood: | n/a | n/a |
2 | ATF3 | chr19:43336349-43336838 | A549 | lung: | n/a | n/a |
3 | ATF3 | chr19:43355048-43355947 | A549 | lung: | n/a | n/a |
4 | ATF3 | chr19:43335349-43336094 | A549 | lung: | n/a | n/a |
5 | ATF3 | chr19:43335307-43336092 | A549 | lung: | n/a | n/a |
6 | ATF3 | chr19:43686016-43686763 | A549 | lung: | n/a | n/a |
7 | ATF3 | chr19:43336336-43336928 | A549 | lung: | n/a | n/a |
8 | ATF3 | chr19:43355412-43355889 | A549 | lung: | n/a | n/a |
9 | BATF | chr19:43552186-43552537 | GM12878 | blood: | n/a | chr19:43552319-43552330 |
10 | BATF | chr19:43692397-43692675 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr19:43692257-43692526 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr19:43588401-43588710 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr19:43552261-43552460 | GM12878 | blood: | n/a | chr19:43552319-43552330 |
14 | BATF | chr19:43361555-43361754 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr19:43442962-43443231 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr19:43738081-43738296 | GM12878 | blood: | n/a | chr19:43738185-43738196 |
17 | BATF | chr19:43711409-43711658 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr19:43613006-43613315 | GM12878 | blood: | n/a | chr19:43613110-43613121 |
19 | BATF | chr19:43591924-43592150 | GM12878 | blood: | n/a | n/a |
20 | BCL3 | chr19:43354910-43356058 | A549 | lung: | n/a | n/a |
21 | BCL3 | chr19:43354946-43356043 | A549 | lung: | n/a | n/a |
22 | BCL3 | chr19:43335292-43335990 | A549 | lung: | n/a | chr19:43335602-43335611 chr19:43335603-43335612 |
23 | BCL3 | chr19:43323095-43323355 | GM12878 | blood: | n/a | n/a |
24 | BCL3 | chr19:43336159-43337656 | A549 | lung: | n/a | chr19:43336227-43336234 |
25 | BCL3 | chr19:43336292-43336877 | A549 | lung: | n/a | n/a |
26 | BCL3 | chr19:43335242-43336126 | A549 | lung: | n/a | chr19:43335602-43335611 chr19:43335603-43335612 |
27 | BCL3 | chr19:43336972-43337663 | A549 | lung: | n/a | n/a |
28 | BCL3 | chr19:43402518-43403428 | A549 | lung: | n/a | n/a |
29 | BHLHE40 | chr19:43582147-43582203 | K562 | blood: | n/a | n/a |
30 | BHLHE40 | chr19:43355572-43355890 | A549 | lung: | n/a | n/a |
31 | BHLHE40 | chr19:43427453-43427512 | GM12878 | blood: | n/a | n/a |
32 | BHLHE40 | chr19:43709323-43709343 | K562 | blood: | n/a | n/a |
33 | BHLHE40 | chr19:43385480-43385517 | K562 | blood: | n/a | n/a |
34 | BHLHE40 | chr19:43733601-43733620 | K562 | blood: | n/a | n/a |
35 | BRCA1 | chr19:43525934-43526309 | Hela-S3 | cervix: | n/a | n/a |
36 | BRCA1 | chr19:43436723-43436914 | Hela-S3 | cervix: | n/a | n/a |
37 | BRCA1 | chr19:43624776-43624937 | Hela-S3 | cervix: | n/a | n/a |
38 | BRCA1 | chr19:43355288-43355847 | Hela-S3 | cervix: | n/a | n/a |
39 | BRCA1 | chr19:43769426-43769782 | Hela-S3 | cervix: | n/a | n/a |
40 | CBX3 | chr19:43385505-43385738 | K562 | blood: | n/a | n/a |
41 | CBX3 | chr19:43385431-43385838 | K562 | blood: | n/a | n/a |
42 | CEBPB | chr19:43705107-43705824 | Hela-S3 | cervix: | n/a | n/a |
43 | CEBPB | chr19:43656430-43656683 | A549 | lung: | n/a | chr19:43656521-43656532 |
44 | CEBPB | chr19:43379142-43379806 | Hela-S3 | cervix: | n/a | n/a |
45 | CEBPB | chr19:43393825-43394224 | Hela-S3 | cervix: | n/a | n/a |
46 | CEBPB | chr19:43686079-43686251 | A549 | lung: | n/a | n/a |
47 | CEBPB | chr19:43685985-43686627 | IMR90 | lung: | n/a | n/a |
48 | CEBPB | chr19:43759754-43759856 | K562 | blood: | n/a | n/a |
49 | CEBPB | chr19:43525880-43526181 | A549 | lung: | n/a | n/a |
50 | CEBPB | chr19:43656390-43656701 | K562 | blood: | n/a | chr19:43656521-43656532 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr19:43587500-43587550 | SK-N-MC | brain: | n/a |
2 | chr19:43441294-43441344 | NB4 | blood: | n/a |
3 | chr19:43588069-43588119 | SKMC | muscle: | n/a |
4 | chr19:43709754-43709804 | Caco-2 | colon: | n/a |
5 | chr19:43673501-43673551 | U87 | brain: | n/a |
6 | chr19:43587500-43587550 | SK-N-MC | brain: | n/a |
7 | chr19:43441294-43441344 | NB4 | blood: | n/a |
8 | chr19:43588069-43588119 | SKMC | muscle: | n/a |
9 | chr19:43709754-43709804 | Caco-2 | colon: | n/a |
10 | chr19:43673501-43673551 | U87 | brain: | n/a |
11 | chr19:43423119-43423169 | ProgFib | skin: | n/a |
12 | chr19:43423176-43423226 | SK-N-SH | brain: | n/a |
13 | chr19:43361218-43361268 | NH-A | brain: | n/a |
14 | chr19:43383986-43384036 | NHBE | bronchial: | n/a |
15 | chr19:43423265-43423315 | GM19239 | blood: | n/a |
16 | chr19:43709754-43709804 | NB4 | blood: | n/a |
17 | chr19:43709654-43709704 | SK-N-MC | brain: | n/a |
18 | chr19:43588069-43588119 | HCPEpiC | choroid plexus: | n/a |
19 | chr19:43355659-43355709 | MCF-7 | breast: | n/a |
20 | chr19:43531770-43531820 | A549 | lung: | n/a |
21 | chr19:43769725-43769775 | HCF | heart: | n/a |
22 | chr19:43691930-43691980 | ovcar-3 | ovarian: | n/a |
23 | chr19:43530536-43530586 | K562 | blood: | n/a |
24 | chr19:43580600-43580650 | AoSMC | blood vessel: | n/a |
25 | chr19:43680072-43680122 | Hela-S3 | cervix: | n/a |
26 | chr19:43680072-43680122 | RPTEC | kidney: | n/a |
27 | chr19:43588069-43588119 | HRE | kidney: | n/a |
28 | chr19:43423176-43423226 | HRPEpiC | eye: | n/a |
29 | chr19:43442809-43442859 | HPAEpiC | pulmonary alveolar: | n/a |
30 | chr19:43423119-43423169 | H1-hESC | embryonic stem cell: | embryo |
31 | chr19:43691930-43691980 | HCF | heart: | n/a |
32 | chr19:43690622-43690672 | HIPEpiC | eye: | n/a |
33 | chr19:43769725-43769775 | SK-N-SH_RA | brain: | n/a |
34 | chr19:43423119-43423169 | HCF | heart: | n/a |
35 | chr19:43683698-43683748 | HepG2 | liver: | n/a |
36 | chr19:43691930-43691980 | SK-N-SH | brain: | n/a |
37 | chr19:43423176-43423226 | NB4 | blood: | n/a |
38 | chr19:43441294-43441344 | AoSMC | blood vessel: | n/a |
39 | chr19:43423265-43423315 | BJ | skin: | n/a |
40 | chr19:43711064-43711114 | AG09319 | gingival: | n/a |
41 | chr19:43383986-43384036 | NH-A | brain: | n/a |
42 | chr19:43441294-43441344 | HNPCEpiC | eye: | n/a |
43 | chr19:43441294-43441344 | AG09309 | skin: | n/a |
44 | chr19:43711249-43711299 | HUVEC | blood vessel: | n/a |
45 | chr19:43588025-43588075 | RPTEC | kidney: | n/a |
46 | chr19:43423176-43423226 | PrEC | prostate: | n/a |
47 | chr19:43673501-43673551 | PANC-1 | pancreas: | n/a |
48 | chr19:43383986-43384036 | PFSK-1 | brain: | n/a |
49 | chr19:43355659-43355709 | LNCaP | prostate: | n/a |
50 | chr19:43442484-43442534 | SK-N-MC | brain: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr19:43265768..43266290-chr19:43769932..43770473,2 | MCF-7 | breast: | |
2 | chr19:43531581..43532101-chr2:1136088..1136613,2 | MCF-7 | breast: | |
3 | chr19:43523469..43524084-chr19:43531918..43532440,2 | MCF-7 | breast: | |
4 | chr19:43523469..43524084-chr19:43531918..43532440,2 | MCF-7 | breast: | |
5 | chr19:43608137..43608719-chr19:43820621..43821519,2 | MCF-7 | breast: | |
6 | chr19:43678340..43681333-chr19:43698109..43700078,2 | MCF-7 | breast: |
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-PSG1-1 | chr19:43358101-43358466 | NONHSAT066571 |
2 | lnc-PSG2-1 | chr19:43585939-43586423 | NONHSAT066581 |
3 | lnc-PSG9-2 | chr19:43715943-43716627 | NONHSAT066591 |
4 | lnc-PSG6-1 | chr19:43429925-43430179 | NR_073194 |
5 | lnc-PSG2-3 | chr19:43601248-43601512 | NONHSAT066582 |
6 | lnc-PSG4-2 | chr19:43688934-43689087 | NONHSAT066587 |
7 | lnc-CD177-1 | chr19:43665002-43665014 | ENSG00000227606.1 |
8 | lnc-PSG4-3 | chr19:43672274-43672355 | NONHSAT066586 |
9 | lnc-PSG6-1 | chr19:43439556-43439921 | NR_073194 |
10 | lnc-PSG1-1 | chr19:43349168-43349446 | NONHSAT146988 |
11 | lnc-PSG9-2 | chr19:43752160-43752275 | NONHSAT066591 |
12 | lnc-PSG2-5 | chr19:43511982-43512194 | NONHSAT066576 |
13 | lnc-PSG9-2 | chr19:43762354-43762608 | NONHSAT066592 |
14 | lnc-PSG6-3 | chr19:43370618-43371302 | NONHSAT066572 |
15 | lnc-PSG6-1 | chr19:43428284-43428976 | NR_073194 |
16 | lnc-PSG9-2 | chr19:43763009-43764898 | NONHSAT066592 |
17 | lnc-PSG1-1 | chr19:43348511-43348765 | NONHSAT146988 |
18 | lnc-PSG6-3 | chr19:43372253-43372507 | NONHSAT066572 |
19 | lnc-PSG4-3 | chr19:43674207-43674717 | NONHSAT066586 |
20 | lnc-PSG6-2 | chr19:43454299-43454539 | NONHSAT066575 |
21 | lnc-PSG2-5 | chr19:43514422-43514579 | NONHSAT066577 |
22 | lnc-PSG1-1 | chr19:43343708-43343916 | NONHSAT066571 |
23 | lnc-PSG6-1 | chr19:43440309-43440647 | NONHSAT066574 |
24 | lnc-PSG2-2 | chr19:43576503-43576781 | NONHSAT066580 |
25 | lnc-PSG4-2 | chr19:43684499-43684748 | NONHSAT066587 |
26 | lnc-PSG2-3 | chr19:43600608-43600855 | NONHSAT066582 |
27 | lnc-PSG11-1 | chr19:43545168-43545400 | NONHSAT066579 |
28 | lnc-CD177-1 | chr19:43658863-43659311 | ENSG00000227606.1 |
29 | lnc-PSG1-1 | chr19:43343708-43343916 | NONHSAT146988 |
30 | lnc-PSG5-1 | chr19:43698492-43699038 | NONHSAT066588 |
31 | lnc-PSG2-5 | chr19:43514110-43514858 | NONHSAT066576 |
32 | lnc-PSG4-3 | chr19:43671924-43672287 | NONHSAT066585 |
33 | lnc-PSG1-1 | chr19:43359708-43359870 | NONHSAT066571 |
34 | lnc-CD177-1 | chr19:43657665-43657763 | ENSG00000227606.1 |
35 | lnc-PSG1-1 | chr19:43341149-43341534 | NONHSAT066571 |
36 | lnc-PSG6-1 | chr19:43428286-43428976 | NONHSAT066573 |
37 | lnc-PSG1-1 | chr19:43348511-43348765 | NONHSAT066571 |
38 | lnc-PSG6-1 | chr19:43429925-43431729 | NONHSAT066573 |
39 | lnc-PSG6-3 | chr19:43372908-43374797 | NONHSAT066572 |
40 | lnc-PSG11-1 | chr19:43540021-43540112 | NONHSAT066579 |
41 | lnc-PSG9-2 | chr19:43724783-43725023 | NONHSAT066593 |
42 | lnc-PSG1-1 | chr19:43343447-43343530 | NONHSAT066571 |
43 | lnc-PSG9-2 | chr19:43715943-43716627 | NONHSAT066592 |
44 | lnc-PSG1-1 | chr19:43358101-43358466 | NONHSAT146988 |
45 | lnc-PSG2-1 | chr19:43586658-43586820 | NONHSAT066581 |
46 | lnc-PSG1-1 | chr19:43343520-43343530 | NONHSAT146988 |
47 | lnc-PSG6-1 | chr19:43433594-43433872 | NR_073194 |
48 | lnc-PSG11-1 | chr19:43544526-43544780 | NONHSAT066579 |
49 | lnc-PSG9-2 | chr19:43752643-43752798 | NONHSAT066591 |
50 | lnc-CD177-1 | chr19:43657431-43657763 | ENSG00000227606.1 |
No data |
No data |
Variant related genes | Relation type |
---|---|
CEACAMP7 | TF binding region |
PSG4 | TF binding region |
CEACAMP9 | TF binding region |
PSG8 | TF binding region |
CEACAMP8 | TF binding region |
PSG1 | TF binding region |
PSG2 | TF binding region |
ENSG00000227606 | TF binding region |
PSG5 | TF binding region |
PSG7 | TF binding region |
PSG11 | TF binding region |
ENSG00000225877 | TF binding region |
PSG6 | TF binding region |
CEACAMP10 | TF binding region |
PSG10P | TF binding region |
PSG9 | TF binding region |
CEACAMP7 | CpG island |
PSG4 | CpG island |
CEACAMP9 | CpG island |
PSG8 | CpG island |
CEACAMP8 | CpG island |
PSG1 | CpG island |
PSG2 | CpG island |
ENSG00000227606 | CpG island |
PSG5 | CpG island |
PSG7 | CpG island |
PSG11 | CpG island |
ENSG00000225877 | CpG island |
PSG6 | CpG island |
CEACAMP10 | CpG island |
PSG10P | CpG island |
PSG9 | CpG island |
ENSG00000243137 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs386809447 | chr19:43322065-43322066 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs530773993 | chr19:43322066-43322067 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs141563998 | chr19:43322081-43322082 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs571007514 | chr19:43322097-43322098 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs147042814 | chr19:43322109-43322110 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs553637793 | chr19:43322118-43322119 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs368636641 | chr19:43322122-43322123 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs374014670 | chr19:43322128-43322129 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs376137037 | chr19:43322133-43322134 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs372906024 | chr19:43322156-43322157 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs576938748 | chr19:43322161-43322162 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs2353132 | chr19:43322163-43322164 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
13 | rs555749624 | chr19:43322182-43322183 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs187972023 | chr19:43322192-43322193 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs192294237 | chr19:43322195-43322196 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs556536032 | chr19:43322196-43322197 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs185836091 | chr19:43322212-43322213 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs368605698 | chr19:43322213-43322214 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs62113065 | chr19:43322219-43322220 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
20 | rs572918910 | chr19:43322238-43322239 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs542117551 | chr19:43322252-43322253 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs187941358 | chr19:43322259-43322260 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs530833422 | chr19:43322267-43322268 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs2353131 | chr19:43322299-43322300 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
25 | rs564457442 | chr19:43322305-43322306 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs192368730 | chr19:43322340-43322341 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs547089161 | chr19:43322349-43322350 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs567068506 | chr19:43322358-43322359 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs143182548 | chr19:43322396-43322397 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs549654488 | chr19:43322397-43322398 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs28374173 | chr19:43322416-43322417 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
32 | rs538137961 | chr19:43322417-43322418 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs184625591 | chr19:43322421-43322422 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs112720858 | chr19:43322436-43322437 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs539166830 | chr19:43322447-43322448 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs141235798 | chr19:43322461-43322462 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs572999571 | chr19:43322471-43322472 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs28535826 | chr19:43322477-43322478 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
39 | rs561913163 | chr19:43322488-43322489 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs28591195 | chr19:43322505-43322506 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs575483640 | chr19:43322551-43322552 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs369873048 | chr19:43322555-43322556 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs564495022 | chr19:43322556-43322557 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs374033069 | chr19:43322568-43322569 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs28558899 | chr19:43322585-43322586 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
46 | rs184663171 | chr19:43322586-43322587 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs10426354 | chr19:43322594-43322595 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs186132319 | chr19:43322598-43322599 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs560336194 | chr19:43322599-43322600 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs529384778 | chr19:43322652-43322653 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Myelodysplastic syndrome | 17634407 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Chordoma | 21602918 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Retinoblastoma | 21504564 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Cancer | 20164919 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Prostate cancer | 18632612 | CNVD |
Autism | 22495311 | CNVD |
Adenoid cystic carcinoma | 18698036 | CNVD |
Ductal carcinoma | 22052326 | CNVD |
Congenital nephrotic syndrome | 18421352 | CNVD |
Astrocytoma | 17934521 | CNVD |
Leukemia | 17361228 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Breast cancer | 21858162 | CNVD |
Breast cancer | 17603634 | CNVD |
Glioma | 21971842 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Oligodendroglial tumors | 17285580 | CNVD |
renal disease | 20603712 | CNVD |
Salivary gland adenoid cystic carcinoma | 17545515 | CNVD |
Breast cancer | 16608533 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Breast cancer | 21364760 | CNVD |
Invasive pancreatic ductal carcinoma | 18765526 | CNVD |
Rhabdomyosarcoma | 16790082 | CNVD |
Chordoma | 18071362 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Bladder cancer | 21909424 | CNVD |
Medulloblastoma | 16783165 | CNVD |
Gastric cancer | 18160780 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Basal cell lymphoma | 19029149 | CNVD |
Breast cancer | 20409316 | CNVD |
Diffuse large b-cell lymphoma | 19029149 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Renal cell carcinoma | 18765545 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Lung cancer | 18438408 | CNVD |
Ovarian clear cell carcinoma | 19293255 | CNVD |
Astrocytoma | 22246337 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 22522925 | CNVD |
Breast cancer | 21509527 | CNVD |
Cancer | 20164920 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Ependymoma | 20639864 | CNVD |
Autism | 19492091 | CNVD |
Ovarian cancer | 20800559 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 16272173 | CNVD |
Spondylocostal dysostosis | 21085971 | CNVD |
Nicotine metabolism | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Glioblastoma multiforme | 17002787 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Breast cancer | 17133270 | CNVD |
Colorectal cancer | 20459617 | CNVD |
Lung adenocarcinoma | 21935476 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Melanoma | 20877625 | CNVD |
Ovarian cancer | 21240255 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Primary Severe Spermatogenic Failure | 20378930 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr19:43321400-43322800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
2 | chr19:43321400-43323000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
3 | chr19:43321400-43323000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
4 | chr19:43321400-43323000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
5 | chr19:43321400-43323000 | Weak transcription | NHEK | skin |
6 | chr19:43321400-43323600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
7 | chr19:43321400-43323600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
8 | chr19:43321400-43324000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
9 | chr19:43321400-43324200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
10 | chr19:43321400-43324800 | Weak transcription | HSMM | muscle |
11 | chr19:43321400-43337400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
12 | chr19:43321600-43323200 | Weak transcription | NHLF | lung |
13 | chr19:43321800-43323000 | Weak transcription | HMEC | breast |
14 | chr19:43321800-43323000 | Weak transcription | NHDF-Ad | bronchial |
15 | chr19:43321800-43323400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
16 | chr19:43321800-43323800 | Weak transcription | NH-A | brain |
17 | chr19:43321800-43324000 | Weak transcription | Osteobl | bone |
18 | chr19:43322800-43324200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
19 | chr19:43323000-43323400 | Genic enhancers | NHEK | skin |
20 | chr19:43323000-43324400 | Enhancers | HMEC | breast |
21 | chr19:43323000-43325200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
22 | chr19:43323000-43325200 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
23 | chr19:43323000-43325400 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
24 | chr19:43323000-43326000 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
25 | chr19:43323000-43326200 | Enhancers | NHDF-Ad | bronchial |
26 | chr19:43323200-43325200 | Enhancers | NHLF | lung |
27 | chr19:43323400-43324400 | Enhancers | NHEK | skin |
28 | chr19:43323400-43325400 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
29 | chr19:43323600-43325400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
30 | chr19:43323600-43325400 | Enhancers | Muscle Satellite Cultured Cells | -- |
31 | chr19:43323800-43326200 | Enhancers | NH-A | brain |
32 | chr19:43324000-43324200 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
33 | chr19:43324000-43324200 | Enhancers | Osteobl | bone |
34 | chr19:43324000-43325400 | Enhancers | HSMMtube | muscle |
35 | chr19:43324200-43324600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
36 | chr19:43324200-43324600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
37 | chr19:43324200-43324800 | Weak transcription | Osteobl | bone |
38 | chr19:43324200-43325600 | Enhancers | Cortex derived primary cultured neurospheres | brain |
39 | chr19:43324400-43324800 | Flanking Active TSS | HMEC | breast |
40 | chr19:43324400-43325000 | Flanking Active TSS | NHEK | skin |
41 | chr19:43324600-43325000 | Enhancers | Brain Anterior Caudate | brain |
42 | chr19:43324600-43325200 | Enhancers | Brain Hippocampus Middle | brain |
43 | chr19:43324600-43325400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
44 | chr19:43324600-43325400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
45 | chr19:43324600-43325400 | Enhancers | Brain Angular Gyrus | brain |
46 | chr19:43324800-43325400 | Enhancers | HSMM | muscle |
47 | chr19:43324800-43325800 | Enhancers | HMEC | breast |
48 | chr19:43325000-43325200 | Enhancers | Brain Inferior Temporal Lobe | brain |
49 | chr19:43325000-43325200 | Enhancers | Osteobl | bone |
50 | chr19:43325000-43325400 | Enhancers | Brain Cingulate Gyrus | brain |