Variant report

Variant nsv579836
Chromosome Location chr19:43774853-43845593
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:259 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:43772000-43778800 Weak transcription NHDF-Ad bronchial
2 chr19:43772200-43785200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr19:43773200-43775000 ZNF genes & repeats Placenta Placenta
4 chr19:43774400-43784800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr19:43774800-43775400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin02 Skin
6 chr19:43778600-43779000 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr19:43778800-43779000 Enhancers NHDF-Ad bronchial
8 chr19:43788800-43789800 Enhancers Hela-S3 cervix
9 chr19:43789800-43790000 Flanking Active TSS Hela-S3 cervix
10 chr19:43790000-43790200 Enhancers Hela-S3 cervix
11 chr19:43790200-43790800 Flanking Active TSS Hela-S3 cervix
12 chr19:43790400-43790600 Enhancers Colon Smooth Muscle Colon
13 chr19:43790800-43791000 Enhancers Hela-S3 cervix
14 chr19:43791000-43791200 Flanking Active TSS Hela-S3 cervix
15 chr19:43791200-43792200 Enhancers Hela-S3 cervix
16 chr19:43794000-43795800 ZNF genes & repeats Adipose Nuclei Adipose
17 chr19:43794200-43795400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
18 chr19:43794800-43795800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr19:43795000-43795400 Active TSS Fetal Heart heart
20 chr19:43795400-43795600 ZNF genes & repeats Brain Cingulate Gyrus brain
21 chr19:43803800-43805800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr19:43804200-43804800 Enhancers HMEC breast
23 chr19:43804200-43805600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr19:43804400-43805600 Enhancers NHEK skin
25 chr19:43804400-43806000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr19:43804800-43810200 Weak transcription HMEC breast
27 chr19:43805600-43809800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr19:43805600-43810200 Weak transcription NHEK skin
29 chr19:43805800-43810200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr19:43806000-43809600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr19:43809600-43811000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr19:43809800-43811000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr19:43809800-43811200 Enhancers Primary neutrophils fromperipheralblood blood
34 chr19:43810000-43811000 Enhancers NHDF-Ad bronchial
35 chr19:43810000-43811200 Enhancers Hela-S3 cervix
36 chr19:43810200-43810400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
37 chr19:43810200-43810600 Enhancers NHEK skin
38 chr19:43810200-43810800 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
39 chr19:43810200-43810800 Enhancers Placenta Amnion Placenta Amnion
40 chr19:43810200-43810800 Enhancers HMEC breast
41 chr19:43810200-43811200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr19:43810400-43810600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
43 chr19:43810600-43811400 Enhancers Primary hematopoietic stem cells short term culture blood
44 chr19:43810800-43811200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr19:43811000-43812000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr19:43811200-43814400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr19:43811200-43815800 Weak transcription Hela-S3 cervix
48 chr19:43812000-43812800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr19:43814000-43815200 Enhancers NHEK skin
50 chr19:43814200-43814800 Enhancers ES-I3 Cell Line embryonic stem cell

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