Variant report

Variant nsv580047
Chromosome Location chr19:53506542-53557749
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:271 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53497600-53509800 Weak transcription Right Atrium heart
2 chr19:53498000-53510400 Weak transcription Placenta Amnion Placenta Amnion
3 chr19:53499200-53507200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr19:53503200-53507000 Weak transcription Placenta Placenta
5 chr19:53506000-53509800 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr19:53506200-53507200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr19:53507000-53507600 Active TSS Brain Germinal Matrix brain
8 chr19:53507000-53510400 Enhancers Placenta Placenta
9 chr19:53507200-53507400 Enhancers H1 Cell Line embryonic stem cell
10 chr19:53507200-53507400 Enhancers iPS-15b Cell Line embryonic stem cell
11 chr19:53507200-53507600 Active TSS Brain Anterior Caudate brain
12 chr19:53507200-53507600 Active TSS Fetal Brain Female brain
13 chr19:53507200-53507600 Enhancers K562 blood
14 chr19:53507200-53507800 Active TSS Brain Substantia Nigra brain
15 chr19:53507200-53508400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr19:53507400-53507600 Bivalent Enhancer H1 Cell Line embryonic stem cell
17 chr19:53507400-53507600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
18 chr19:53507400-53507800 Enhancers Fetal Heart heart
19 chr19:53507600-53509600 Weak transcription K562 blood
20 chr19:53507800-53508000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
21 chr19:53507800-53508400 ZNF genes & repeats Gastric stomach
22 chr19:53508000-53513200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr19:53508400-53509600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr19:53509600-53509800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr19:53509600-53509800 Enhancers K562 blood
26 chr19:53509800-53510200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr19:53509800-53510200 Weak transcription K562 blood
28 chr19:53510200-53510400 Enhancers K562 blood
29 chr19:53510200-53511000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr19:53510400-53510800 Active TSS Rectal Mucosa Donor 29 rectum
31 chr19:53510400-53511000 Enhancers Placenta Amnion Placenta Amnion
32 chr19:53510400-53511200 Enhancers Dnd41 blood
33 chr19:53510400-53511200 Flanking Active TSS K562 blood
34 chr19:53510400-53511400 Flanking Active TSS Placenta Placenta
35 chr19:53510600-53511600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
36 chr19:53510800-53511200 Weak transcription Right Ventricle heart
37 chr19:53511000-53511200 Flanking Active TSS Placenta Amnion Placenta Amnion
38 chr19:53511000-53511800 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr19:53511200-53511400 Enhancers Right Ventricle heart
40 chr19:53511200-53511800 Bivalent Enhancer K562 blood
41 chr19:53511200-53512600 Enhancers Placenta Amnion Placenta Amnion
42 chr19:53511400-53511800 Active TSS Placenta Placenta
43 chr19:53511400-53512000 Weak transcription Right Ventricle heart
44 chr19:53511600-53512200 Enhancers Skeletal Muscle Male skeletal muscle
45 chr19:53511800-53512000 Flanking Active TSS Placenta Placenta
46 chr19:53511800-53512400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr19:53512000-53512200 Active TSS Placenta Placenta
48 chr19:53512200-53512400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr19:53512200-53512400 Flanking Active TSS Placenta Placenta
50 chr19:53512200-53512400 Enhancers Right Ventricle heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links