Variant report

Variant nsv580057
Chromosome Location chr19:53522100-53566629
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:361 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53522600-53523400 Enhancers Fetal Adrenal Gland Adrenal Gland
2 chr19:53527800-53528000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
3 chr19:53528000-53538600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr19:53529400-53530000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr19:53529600-53529800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr19:53530000-53540400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr19:53531000-53531200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr19:53531000-53531800 Enhancers iPS-20b Cell Line embryonic stem cell
9 chr19:53531200-53532000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr19:53531600-53532200 Enhancers HUES64 Cell Line embryonic stem cell
11 chr19:53531600-53532200 Enhancers iPS-15b Cell Line embryonic stem cell
12 chr19:53531800-53532000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr19:53531800-53532200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
14 chr19:53531800-53532400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
15 chr19:53532000-53532200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr19:53532000-53532800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr19:53532200-53539600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr19:53532800-53533000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr19:53536200-53536400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr19:53536400-53536600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
21 chr19:53536400-53539600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr19:53536600-53536800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
23 chr19:53536600-53539800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr19:53536800-53538600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr19:53537000-53538400 Weak transcription Fetal Kidney kidney
26 chr19:53537800-53538800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr19:53538400-53538800 Enhancers Placenta Amnion Placenta Amnion
28 chr19:53538400-53540400 Enhancers Placenta Placenta
29 chr19:53538600-53538800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
30 chr19:53538600-53538800 ZNF genes & repeats Fetal Kidney kidney
31 chr19:53538800-53539200 Weak transcription Placenta Amnion Placenta Amnion
32 chr19:53538800-53539600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr19:53538800-53539600 Weak transcription Fetal Kidney kidney
34 chr19:53539200-53539400 Enhancers Placenta Amnion Placenta Amnion
35 chr19:53539400-53540600 Weak transcription Placenta Amnion Placenta Amnion
36 chr19:53539600-53539800 Flanking Bivalent TSS/Enh Fetal Kidney kidney
37 chr19:53539600-53540000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr19:53539600-53540000 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
39 chr19:53539600-53540200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr19:53539600-53541400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
41 chr19:53539600-53541400 ZNF genes & repeats Duodenum Mucosa Duodenum
42 chr19:53539800-53540000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
43 chr19:53539800-53540200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr19:53539800-53540400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
45 chr19:53539800-53541200 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
46 chr19:53539800-53541400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr19:53539800-53541600 Active TSS Fetal Kidney kidney
48 chr19:53539800-53542200 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
49 chr19:53540000-53540200 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
50 chr19:53540000-53540600 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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