Variant report

Variant nsv580077
Chromosome Location chr19:53664448-53669492
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53662600-53668800 Weak transcription Placenta Amnion Placenta Amnion
2 chr19:53662800-53668200 Weak transcription Pancreas Pancrea
3 chr19:53663000-53665400 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr19:53663000-53665600 Weak transcription Right Atrium heart
5 chr19:53663000-53667000 Weak transcription Brain Hippocampus Middle brain
6 chr19:53663000-53667600 Weak transcription Ovary ovary
7 chr19:53663000-53668000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr19:53664200-53664600 ZNF genes & repeats Fetal Intestine Large intestine
9 chr19:53664200-53664600 Flanking Active TSS K562 blood
10 chr19:53664400-53664600 Enhancers Fetal Heart heart
11 chr19:53664400-53664600 ZNF genes & repeats Gastric stomach
12 chr19:53664400-53670200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr19:53664600-53665200 Enhancers K562 blood
14 chr19:53664800-53695400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr19:53665800-53667600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr19:53666600-53670400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
17 chr19:53666800-53667000 Weak transcription Stomach Smooth Muscle stomach
18 chr19:53666800-53669600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr19:53667000-53669400 ZNF genes & repeats Primary B cells from cord blood blood
20 chr19:53667000-53669800 ZNF genes & repeats Brain Hippocampus Middle brain
21 chr19:53667000-53670000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr19:53667000-53670200 ZNF genes & repeats Fetal Brain Female brain
23 chr19:53667000-53670400 ZNF genes & repeats Adipose Nuclei Adipose
24 chr19:53667200-53670200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
25 chr19:53667600-53669400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
26 chr19:53667600-53669600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr19:53667600-53669600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
28 chr19:53667600-53669600 ZNF genes & repeats Ovary ovary
29 chr19:53667600-53670000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
30 chr19:53667600-53670200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr19:53667800-53668600 ZNF genes & repeats Primary T killer memory cells from peripheral blood blood
32 chr19:53667800-53669600 ZNF genes & repeats H1 Cell Line embryonic stem cell
33 chr19:53667800-53669600 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
34 chr19:53667800-53669600 ZNF genes & repeats Fetal Lung lung
35 chr19:53667800-53669600 ZNF genes & repeats Left Ventricle heart
36 chr19:53667800-53670000 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr19:53667800-53670600 ZNF genes & repeats Dnd41 blood
38 chr19:53668000-53669400 ZNF genes & repeats H9 Cell Line embryonic stem cell
39 chr19:53668000-53669400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
40 chr19:53668000-53669400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
41 chr19:53668000-53669400 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr19:53668000-53669400 ZNF genes & repeats Brain Cingulate Gyrus brain
43 chr19:53668000-53669600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
44 chr19:53668000-53669600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr19:53668000-53669600 ZNF genes & repeats Duodenum Mucosa Duodenum
46 chr19:53668000-53669600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
47 chr19:53668000-53669600 ZNF genes & repeats Fetal Muscle Leg muscle
48 chr19:53668000-53669800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
49 chr19:53668000-53669800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr19:53668000-53669800 ZNF genes & repeats Colon Smooth Muscle Colon

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