Variant report

Variant	nsv580350
Chromosome Location	chr19:56353664-56515334
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr19:56404597-56404754	GM12878	blood:	n/a	n/a
2	BCL11A	chr19:56404601-56404738	GM12878	blood:	n/a	n/a
3	BCL11A	chr19:56404582-56404766	GM12878	blood:	n/a	n/a
4	CBX3	chr19:56485399-56485613	K562	blood:	n/a	n/a
5	CEBPB	chr19:56480616-56480742	HepG2	liver:	n/a	chr19:56480657-56480668
6	CEBPB	chr19:56448024-56448130	K562	blood:	n/a	n/a
7	CEBPB	chr19:56385000-56385192	K562	blood:	n/a	n/a
8	CEBPB	chr19:56469909-56469933	HepG2	liver:	n/a	n/a
9	CEBPB	chr19:56413999-56414214	HepG2	liver:	n/a	chr19:56414104-56414121 chr19:56414107-56414118 chr19:56414109-56414120 chr19:56414107-56414120 chr19:56414107-56414120
10	CEBPB	chr19:56492421-56492621	HepG2	liver:	n/a	chr19:56492531-56492542
11	CEBPB	chr19:56448063-56448170	A549	lung:	n/a	n/a
12	CEBPB	chr19:56502244-56502561	Hela-S3	cervix:	n/a	n/a
13	CEBPB	chr19:56448047-56448229	IMR90	lung:	n/a	n/a
14	CEBPB	chr19:56413977-56414273	K562	blood:	n/a	chr19:56414104-56414121 chr19:56414107-56414118 chr19:56414109-56414120 chr19:56414107-56414120 chr19:56414107-56414120
15	CEBPB	chr19:56448058-56448093	H1-hESC	embryonic stem cell:	n/a	n/a
16	CEBPB	chr19:56384985-56385182	HepG2	liver:	n/a	n/a
17	CEBPB	chr19:56469812-56470113	MCF-7	breast:	n/a	n/a
18	CEBPB	chr19:56406673-56406772	HepG2	liver:	n/a	chr19:56406697-56406708
19	CREB1	chr19:56410261-56410516	A549	lung:	n/a	n/a
20	CREB1	chr19:56368555-56368853	GM12878	blood:	n/a	n/a
21	CTCF	chr19:56457280-56457430	HepG2	liver:	n/a	chr19:56457358-56457376 chr19:56457360-56457373 chr19:56457359-56457375
22	CTCF	chr19:56451320-56451470	MCF-7	breast:	n/a	n/a
23	CTCF	chr19:56361586-56361622	GM10266	blood:	n/a	n/a
24	CTCF	chr19:56478029-56478227	MCF-7	breast:	n/a	n/a
25	CTCF	chr19:56457320-56457470	SK-N-SH_RA	brain:	n/a	chr19:56457358-56457376 chr19:56457360-56457373 chr19:56457359-56457375
26	CTCF	chr19:56455940-56456090	Caco-2	colon:	n/a	n/a
27	CTCF	chr19:56425018-56425472	MCF-7	breast:	n/a	chr19:56425239-56425257 chr19:56425065-56425073 chr19:56425242-56425255
28	CTCF	chr19:56425120-56425270	GM12873	blood:	n/a	chr19:56425239-56425257 chr19:56425242-56425255
29	CTCF	chr19:56425143-56425337	A549	lung:	n/a	chr19:56425239-56425257 chr19:56425242-56425255
30	CTCF	chr19:56425091-56425427	HepG2	liver:	n/a	chr19:56425239-56425257 chr19:56425242-56425255
31	CTCF	chr19:56376627-56376650	GM13976	blood:	n/a	n/a
32	CTCF	chr19:56425141-56425358	MCF-7	breast:	n/a	chr19:56425239-56425257 chr19:56425242-56425255
33	CTCF	chr19:56457300-56457450	SK-N-SH_RA	brain:	n/a	chr19:56457358-56457376 chr19:56457360-56457373 chr19:56457359-56457375
34	CTCF	chr19:56454413-56454468	MCF-7	breast:	n/a	n/a
35	CTCF	chr19:56425145-56425365	GM12892	blood:	n/a	chr19:56425239-56425257 chr19:56425242-56425255
36	CTCF	chr19:56457277-56457464	MCF-7	breast:	n/a	chr19:56457358-56457376 chr19:56457360-56457373 chr19:56457359-56457375
37	CTCF	chr19:56457320-56457470	A549	lung:	n/a	chr19:56457358-56457376 chr19:56457360-56457373 chr19:56457359-56457375
38	CTCF	chr19:56425180-56425330	GM12866	blood:	n/a	chr19:56425239-56425257 chr19:56425242-56425255
39	CTCF	chr19:56425120-56425270	WERI-Rb-1	eye:	n/a	chr19:56425239-56425257 chr19:56425242-56425255
40	CTCF	chr19:56457340-56457490	HBMEC	blood vessel:	n/a	chr19:56457358-56457376 chr19:56457360-56457373 chr19:56457359-56457375
41	CTCF	chr19:56478009-56478262	K562	blood:	n/a	n/a
42	CTCF	chr19:56457243-56457463	MCF-7	breast:	n/a	chr19:56457358-56457376 chr19:56457360-56457373 chr19:56457359-56457375
43	CTCF	chr19:56478100-56478250	Hela-S3	cervix:	n/a	n/a
44	CTCF	chr19:56425103-56425484	K562	blood:	n/a	chr19:56425239-56425257 chr19:56425242-56425255
45	CTCF	chr19:56457280-56457430	WERI-Rb-1	eye:	n/a	chr19:56457358-56457376 chr19:56457360-56457373 chr19:56457359-56457375
46	CTCF	chr19:56425180-56425330	MCF-7	breast:	n/a	chr19:56425239-56425257 chr19:56425242-56425255
47	CTCF	chr19:56457260-56457410	GM12878	blood:	n/a	chr19:56457358-56457376 chr19:56457360-56457373 chr19:56457359-56457375
48	CTCF	chr19:56457280-56457430	K562	blood:	n/a	chr19:56457358-56457376 chr19:56457360-56457373 chr19:56457359-56457375
49	CTCF	chr19:56425145-56425315	HepG2	liver:	n/a	chr19:56425239-56425257 chr19:56425242-56425255
50	CTCF	chr19:56425160-56425310	HRE	kidney:	n/a	chr19:56425239-56425257 chr19:56425242-56425255

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:56459234-56459284	SK-N-SH	brain:	n/a
2	chr19:56366191-56366241	GM12878	blood:	n/a
3	chr19:56459234-56459284	SK-N-SH	brain:	n/a
4	chr19:56366191-56366241	GM12878	blood:	n/a
5	chr19:56369522-56369572	Hela-S3	cervix:	n/a
6	chr19:56443419-56443469	SAEC	small airway:	n/a
7	chr19:56366191-56366241	AG09309	skin:	n/a
8	chr19:56367830-56367880	PrEC	prostate:	n/a
9	chr19:56364183-56364233	GM12891	blood:	n/a
10	chr19:56418660-56418710	SKMC	muscle:	n/a
11	chr19:56369602-56369652	T-47D	breast:	n/a
12	chr19:56366191-56366241	GM12891	blood:	n/a
13	chr19:56366191-56366241	AG04449	skin:	fetal
14	chr19:56366191-56366241	HRE	kidney:	n/a
15	chr19:56444163-56444213	HCT-116	colon:	n/a
16	chr19:56510200-56510250	AG04450	lung:	fetal
17	chr19:56364183-56364233	HEEpiC	esophagus:	n/a
18	chr19:56459108-56459158	HEK293	kidney:	embryo
19	chr19:56367316-56367366	HPAEpiC	pulmonary alveolar:	n/a
20	chr19:56367830-56367880	HRCEpiC	kidney:	n/a
21	chr19:56367316-56367366	AG09309	skin:	n/a
22	chr19:56367316-56367366	AG04450	lung:	fetal
23	chr19:56443824-56443874	HPAEpiC	pulmonary alveolar:	n/a
24	chr19:56444551-56444601	T-47D	breast:	n/a
25	chr19:56459103-56459153	ovcar-3	ovarian:	n/a
26	chr19:56369522-56369572	HRCEpiC	kidney:	n/a
27	chr19:56459103-56459153	HepG2	liver:	n/a
28	chr19:56510833-56510883	SK-N-SH_RA	brain:	n/a
29	chr19:56459103-56459153	CMK	blood:	n/a
30	chr19:56369522-56369572	SKMC	muscle:	n/a
31	chr19:56510833-56510883	PrEC	prostate:	n/a
32	chr19:56510200-56510250	PFSK-1	brain:	n/a
33	chr19:56510965-56511015	ECC-1	luminal epithelium:	n/a
34	chr19:56369928-56369978	HNPCEpiC	eye:	n/a
35	chr19:56510200-56510250	LNCaP	prostate:	n/a
36	chr19:56418660-56418710	T-47D	breast:	n/a
37	chr19:56444551-56444601	NHDF-neo	bronchial:	n/a
38	chr19:56510892-56510942	GM12878	blood:	n/a
39	chr19:56458926-56458976	ECC-1	luminal epithelium:	n/a
40	chr19:56444551-56444601	Hepatocyte	liver:	n/a
41	chr19:56369602-56369652	GM19239	blood:	n/a
42	chr19:56367830-56367880	K562	blood:	n/a
43	chr19:56366191-56366241	AG09319	gingival:	n/a
44	chr19:56443419-56443469	CMK	blood:	n/a
45	chr19:56510892-56510942	HUVEC	blood vessel:	n/a
46	chr19:56510892-56510942	NHDF-neo	bronchial:	n/a
47	chr19:56443824-56443874	GM12892	blood:	n/a
48	chr19:56459103-56459153	A549	lung:	n/a
49	chr19:56458926-56458976	NHBE	bronchial:	n/a
50	chr19:56510892-56510942	NT2-D1	testis:	n/a

No.	Distal block	Cell Line	Cell type
1	chr19:56373661..56375169-chr19:56376696..56378685,2	K562	blood:
2	chr19:56439351..56441429-chr19:56446067..56448328,2	MCF-7	breast:
3	chr19:56464807..56467455-chr19:56469685..56471686,2	K562	blood:
4	chr19:56464653..56466307-chr19:56469683..56471185,2	K562	blood:
5	chr19:56454965..56456732-chr19:56458857..56460406,2	MCF-7	breast:
6	chr19:56464807..56467455-chr19:56469685..56471686,2	K562	blood:
7	chr19:56437345..56439386-chr19:56452694..56454259,2	K562	blood:
8	chr19:56430402..56432379-chr19:56447676..56449907,2	K562	blood:
9	chr19:56373661..56375169-chr19:56376696..56378685,2	K562	blood:
10	chr19:56424869..56425718-chr19:56582163..56583125,2	MCF-7	breast:
11	chr19:56430402..56432379-chr19:56447676..56449907,2	K562	blood:
12	chr19:56437345..56439386-chr19:56452694..56454259,2	K562	blood:
13	chr19:56464653..56466307-chr19:56469683..56471185,2	K562	blood:
14	chr19:56439351..56441429-chr19:56446067..56448328,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NLRP4-1	chr19:56400283-56401109	XLOC_013162
2	lnc-NLRP4-1	chr19:56399226-56399347	XLOC_013162

Variant related genes	Relation type
NLRP8	TF binding region
NLRP13	TF binding region
NLRP4	TF binding region
NLRP5	TF binding region
NLRP8	CpG island
NLRP13	CpG island
NLRP4	CpG island
NLRP5	CpG island
ENSG00000179709	chromatin interactions

Extended variants
information (count: 1668 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:1668 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs536440647	chr19:56357809-56357810	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs564080581	chr19:56357847-56357848	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs181398346	chr19:56357885-56357886	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs396189	chr19:56357906-56357907	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs186595663	chr19:56357938-56357939	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs528945966	chr19:56357942-56357943	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs549574858	chr19:56357948-56357949	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs137933925	chr19:56357953-56357954	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs149028266	chr19:56357994-56357995	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs533593334	chr19:56357999-56358000	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs542595518	chr19:56359407-56359408	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs560450819	chr19:56359420-56359421	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs145410139	chr19:56359438-56359439	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs10417674	chr19:56359440-56359441	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs147829353	chr19:56359450-56359451	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs187295911	chr19:56359496-56359497	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs148870469	chr19:56359501-56359502	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs115106020	chr19:56359507-56359508	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs536522254	chr19:56359551-56359552	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs552700436	chr19:56359556-56359557	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs142724300	chr19:56359580-56359581	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs151006950	chr19:56359619-56359620	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs558279169	chr19:56359621-56359622	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs424621	chr19:56359633-56359634	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs192238847	chr19:56359702-56359703	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs140747965	chr19:56359712-56359713	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs415855	chr19:56359744-56359745	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs402099	chr19:56359771-56359772	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs10417215	chr19:56359802-56359803	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs12609633	chr19:56359810-56359811	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs10421934	chr19:56359825-56359826	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs563002518	chr19:56359839-56359840	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs111323262	chr19:56359843-56359844	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs531808297	chr19:56359853-56359854	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs145318996	chr19:56359879-56359880	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs375545	chr19:56359907-56359908	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs7258004	chr19:56359931-56359932	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs556754241	chr19:56360043-56360044	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs183212679	chr19:56360047-56360048	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs551421988	chr19:56360048-56360049	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs534263238	chr19:56360063-56360064	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs558115666	chr19:56360064-56360065	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs187952237	chr19:56360074-56360075	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs537898945	chr19:56360115-56360116	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs75083593	chr19:56360143-56360144	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs575017055	chr19:56360154-56360155	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs144530281	chr19:56360179-56360180	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs141552302	chr19:56360191-56360192	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs577595527	chr19:56360192-56360193	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs6509964	chr19:56360203-56360204	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:70)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16272173	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Breast cancer	21785460	CNVD
Myelofibrosis	22110671	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Alzheimer''s disease	22166940	CNVD
Heart disease	21282601	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Glioblastoma multiforme	21922591	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Breast cancer	20409316	CNVD
Schizophrenia	23813976	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD

Chromatin state (count:48 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:56357800-56358000	ZNF genes & repeats	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr19:56359400-56361200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
3	chr19:56360400-56361000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr19:56360400-56361400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
5	chr19:56363400-56364600	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
6	chr19:56364600-56372200	Enhancers	Primary B cells from peripheral blood	blood
7	chr19:56365200-56365400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
8	chr19:56366400-56366800	Enhancers	GM12878-XiMat	blood
9	chr19:56366800-56367000	Flanking Active TSS	GM12878-XiMat	blood
10	chr19:56367000-56367200	Enhancers	GM12878-XiMat	blood
11	chr19:56367200-56367400	Flanking Active TSS	GM12878-XiMat	blood
12	chr19:56367400-56368200	Enhancers	GM12878-XiMat	blood
13	chr19:56368200-56368800	Weak transcription	GM12878-XiMat	blood
14	chr19:56368800-56369000	Active TSS	GM12878-XiMat	blood
15	chr19:56369000-56369200	Flanking Active TSS	GM12878-XiMat	blood
16	chr19:56369200-56369400	Enhancers	GM12878-XiMat	blood
17	chr19:56369400-56370200	ZNF genes & repeats	GM12878-XiMat	blood
18	chr19:56382600-56384000	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
19	chr19:56412400-56413200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr19:56419000-56419400	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr19:56421400-56421600	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
22	chr19:56423600-56424600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr19:56442400-56443000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr19:56463600-56464400	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
25	chr19:56468000-56468200	Bivalent Enhancer	HepG2	liver
26	chr19:56482000-56482400	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
27	chr19:56485200-56486600	Enhancers	Brain Hippocampus Middle	brain
28	chr19:56486200-56487000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
29	chr19:56486400-56486800	Flanking Active TSS	Brain Anterior Caudate	brain
30	chr19:56495800-56496400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
31	chr19:56496000-56496200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr19:56496200-56497600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr19:56496400-56497600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
34	chr19:56497600-56498000	Bivalent/Poised TSS	Breast Myoepithelial Primary Cells	Breast
35	chr19:56497600-56498200	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr19:56497600-56498200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
37	chr19:56497800-56498200	ZNF genes & repeats	Pancreas	Pancrea
38	chr19:56502400-56502800	Enhancers	Hela-S3	cervix
39	chr19:56504600-56504800	Active TSS	HSMM	muscle
40	chr19:56504600-56504800	Weak transcription	HSMMtube	muscle
41	chr19:56504600-56505000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
42	chr19:56504600-56505000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
43	chr19:56504600-56505000	ZNF genes & repeats	NHEK	skin
44	chr19:56504800-56505000	Enhancers	HSMMtube	muscle
45	chr19:56504800-56505200	Flanking Active TSS	HSMM	muscle
46	chr19:56504800-56505600	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
47	chr19:56504800-56505600	Active TSS	GM12878-XiMat	blood
48	chr19:56505000-56505800	Weak transcription	HSMMtube	muscle

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