No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs372565828 |
chr2:54348708-54348709 |
Weak transcription Enhancers ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs527544779 |
chr2:54348709-54348710 |
Weak transcription Enhancers ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs531374240 |
chr2:54348718-54348719 |
Weak transcription Enhancers ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs193259115 |
chr2:54348794-54348795 |
Weak transcription Enhancers ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs560833978 |
chr2:54348813-54348814 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs551406094 |
chr2:54348821-54348822 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs11675345 |
chr2:54348850-54348851 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
8 |
rs73935070 |
chr2:54348895-54348896 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
9 |
rs144595297 |
chr2:54348938-54348939 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs367673106 |
chr2:54348950-54348951 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs115474767 |
chr2:54349000-54349001 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs72906778 |
chr2:54349002-54349003 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
13 |
rs72800751 |
chr2:54349008-54349009 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
14 |
rs534973760 |
chr2:54349009-54349010 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs138514855 |
chr2:54349022-54349023 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs568094114 |
chr2:54349035-54349036 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs6757372 |
chr2:54349069-54349070 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
18 |
rs201743419 |
chr2:54349109-54349110 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs183532441 |
chr2:54349116-54349117 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs76106461 |
chr2:54349127-54349128 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs545189090 |
chr2:54349148-54349149 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs558426331 |
chr2:54349163-54349164 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs572318663 |
chr2:54349184-54349185 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs73935073 |
chr2:54349195-54349196 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
25 |
rs560895504 |
chr2:54349227-54349228 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs529705108 |
chr2:54349233-54349234 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs149245970 |
chr2:54349254-54349255 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs563376552 |
chr2:54349255-54349256 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs532070148 |
chr2:54349280-54349281 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs552755367 |
chr2:54349310-54349311 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs143582296 |
chr2:54349320-54349321 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs528812061 |
chr2:54349334-54349335 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs187821778 |
chr2:54349361-54349362 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs568154543 |
chr2:54349377-54349378 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs556287556 |
chr2:54349433-54349434 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs148071852 |
chr2:54349530-54349531 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs556886947 |
chr2:54349545-54349546 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs570932223 |
chr2:54349552-54349553 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs539513168 |
chr2:54349572-54349573 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs558738938 |
chr2:54349614-54349615 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs572125597 |
chr2:54349615-54349616 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs192266849 |
chr2:54349667-54349668 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs554899975 |
chr2:54349668-54349669 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs574740033 |
chr2:54349680-54349681 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs576121025 |
chr2:54349699-54349700 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs543452895 |
chr2:54349721-54349722 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs201973249 |
chr2:54349729-54349730 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs532257938 |
chr2:54349764-54349765 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs545561451 |
chr2:54349775-54349776 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs371996233 |
chr2:54349804-54349805 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|