Variant report

Variant nsv582011
Chromosome Location chr2:54348704-54384927
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:372 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54343200-54350600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:54343400-54349000 Weak transcription HSMMtube muscle
3 chr2:54343400-54349400 Weak transcription Psoas Muscle Psoas
4 chr2:54343400-54349600 Weak transcription Placenta Amnion Placenta Amnion
5 chr2:54343400-54351000 Weak transcription Primary T cells fromperipheralblood blood
6 chr2:54343400-54353000 Weak transcription Fetal Lung lung
7 chr2:54343400-54388600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr2:54343600-54349000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr2:54343600-54349400 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr2:54343600-54350000 Weak transcription Stomach Smooth Muscle stomach
11 chr2:54343600-54350600 Weak transcription Brain Cingulate Gyrus brain
12 chr2:54343800-54349000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr2:54343800-54349000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr2:54343800-54349400 Weak transcription Fetal Heart heart
15 chr2:54343800-54355800 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr2:54344000-54349000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr2:54344000-54349800 Weak transcription Primary T cells from cord blood blood
18 chr2:54344000-54349800 Weak transcription Hela-S3 cervix
19 chr2:54344400-54348800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr2:54347000-54349400 ZNF genes & repeats Primary B cells from cord blood blood
21 chr2:54347400-54349200 ZNF genes & repeats Primary B cells from peripheral blood blood
22 chr2:54347800-54348800 ZNF genes & repeats Brain Hippocampus Middle brain
23 chr2:54347800-54350000 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr2:54348000-54348800 Enhancers HepG2 liver
25 chr2:54348200-54349000 Weak transcription Gastric stomach
26 chr2:54348200-54350000 Weak transcription Aorta Aorta
27 chr2:54348200-54350200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr2:54348200-54353600 Weak transcription Brain Substantia Nigra brain
29 chr2:54348400-54349200 Weak transcription HSMM muscle
30 chr2:54348400-54349600 Enhancers Skeletal Muscle Male skeletal muscle
31 chr2:54348400-54350000 Enhancers HMEC breast
32 chr2:54348400-54350200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr2:54348400-54350400 Weak transcription Right Atrium heart
34 chr2:54348400-54351200 Enhancers Fetal Adrenal Gland Adrenal Gland
35 chr2:54348400-54361800 Weak transcription Brain Anterior Caudate brain
36 chr2:54348600-54348800 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr2:54348600-54349000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr2:54348600-54349000 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr2:54348600-54349000 Weak transcription NHLF lung
40 chr2:54348600-54349400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:54348600-54349400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr2:54348600-54349400 Weak transcription Fetal Muscle Leg muscle
43 chr2:54348600-54349800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr2:54348600-54349800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr2:54348600-54349800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr2:54348600-54350000 Weak transcription Adipose Nuclei Adipose
47 chr2:54348600-54350000 Weak transcription Brain Inferior Temporal Lobe brain
48 chr2:54348600-54350800 Weak transcription Right Ventricle heart
49 chr2:54348600-54362200 Weak transcription Liver Liver
50 chr2:54348600-54365800 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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