Variant report

Variant nsv582012
Chromosome Location chr2:54459093-54502912
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:297 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54448600-54459400 Weak transcription Esophagus oesophagus
2 chr2:54448800-54459400 Weak transcription HSMM muscle
3 chr2:54449800-54535200 Weak transcription Primary T cells from cord blood blood
4 chr2:54451600-54459400 Weak transcription Left Ventricle heart
5 chr2:54452400-54468000 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr2:54452800-54490200 Weak transcription Primary B cells from cord blood blood
7 chr2:54453800-54460400 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr2:54453800-54466200 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr2:54455400-54461400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr2:54455800-54466200 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr2:54455800-54476000 Weak transcription K562 blood
12 chr2:54456400-54460000 Weak transcription Brain Anterior Caudate brain
13 chr2:54456400-54466200 Weak transcription Ovary ovary
14 chr2:54456400-54487200 Weak transcription Psoas Muscle Psoas
15 chr2:54457200-54461400 Weak transcription Adipose Nuclei Adipose
16 chr2:54457600-54461000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr2:54458800-54463200 Enhancers HepG2 liver
18 chr2:54459400-54459600 Enhancers Esophagus oesophagus
19 chr2:54459400-54459600 ZNF genes & repeats HSMM muscle
20 chr2:54459400-54459800 ZNF genes & repeats Left Ventricle heart
21 chr2:54459400-54461400 Weak transcription Primary hematopoietic stem cells blood
22 chr2:54459600-54461600 Weak transcription HSMM muscle
23 chr2:54459800-54466200 Weak transcription Left Ventricle heart
24 chr2:54461000-54461600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr2:54461400-54461600 Enhancers Adipose Nuclei Adipose
26 chr2:54461400-54461800 ZNF genes & repeats Primary hematopoietic stem cells blood
27 chr2:54461600-54465000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr2:54461600-54466400 Weak transcription Adipose Nuclei Adipose
29 chr2:54463200-54463400 Weak transcription HepG2 liver
30 chr2:54464600-54464800 Weak transcription Fetal Lung lung
31 chr2:54464800-54465200 ZNF genes & repeats Fetal Lung lung
32 chr2:54465000-54465400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr2:54465200-54467800 Weak transcription Fetal Lung lung
34 chr2:54465400-54466200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr2:54465600-54467200 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr2:54465800-54467600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr2:54466000-54466200 Enhancers NH-A brain
38 chr2:54466000-54468200 Enhancers HSMM muscle
39 chr2:54466000-54468400 Enhancers HSMMtube muscle
40 chr2:54466000-54468600 Enhancers Muscle Satellite Cultured Cells --
41 chr2:54466000-54468600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr2:54466000-54468600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
43 chr2:54466000-54468600 Enhancers Osteobl bone
44 chr2:54466000-54468800 Enhancers NHDF-Ad bronchial
45 chr2:54466200-54466600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr2:54466200-54466600 Enhancers Left Ventricle heart
47 chr2:54466200-54466600 Enhancers Right Ventricle heart
48 chr2:54466200-54466600 Flanking Active TSS NH-A brain
49 chr2:54466200-54466800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr2:54466200-54467400 Enhancers Ovary ovary

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