Variant report

Variant nsv584042
Chromosome Location chr2:188678973-188793238
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:256 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:188677200-188681400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr2:188679800-188680200 Enhancers HepG2 liver
3 chr2:188680000-188680200 Enhancers Stomach Mucosa stomach
4 chr2:188680000-188680400 Enhancers A549 lung
5 chr2:188680200-188682000 Weak transcription HepG2 liver
6 chr2:188680400-188684000 Weak transcription A549 lung
7 chr2:188681400-188682000 ZNF genes & repeats H9 Cell Line embryonic stem cell
8 chr2:188681400-188682200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
9 chr2:188681400-188682600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
10 chr2:188682000-188682600 Enhancers HepG2 liver
11 chr2:188684000-188684200 Enhancers A549 lung
12 chr2:188684200-188685000 Weak transcription A549 lung
13 chr2:188685000-188685400 Enhancers A549 lung
14 chr2:188690000-188691200 Enhancers Psoas Muscle Psoas
15 chr2:188690200-188691200 Enhancers Skeletal Muscle Male skeletal muscle
16 chr2:188690400-188691200 Enhancers Skeletal Muscle Female skeletal muscle
17 chr2:188690600-188691000 Enhancers Muscle Satellite Cultured Cells --
18 chr2:188690600-188691000 Enhancers Hela-S3 cervix
19 chr2:188690600-188691200 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr2:188692200-188692800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
21 chr2:188694800-188695600 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr2:188699800-188700200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
23 chr2:188703400-188704000 Enhancers Stomach Mucosa stomach
24 chr2:188703600-188703800 Enhancers Aorta Aorta
25 chr2:188703600-188704400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr2:188703800-188716800 Weak transcription Aorta Aorta
27 chr2:188707600-188708000 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr2:188707800-188708200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr2:188708000-188713400 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr2:188709200-188709400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr2:188709400-188710200 Enhancers Fetal Lung lung
32 chr2:188709400-188711400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr2:188710200-188716000 Weak transcription Fetal Lung lung
34 chr2:188711400-188711600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr2:188711400-188711800 Enhancers Liver Liver
36 chr2:188711600-188712200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr2:188711800-188712000 Flanking Active TSS Liver Liver
38 chr2:188711800-188713400 Enhancers Fetal Intestine Large intestine
39 chr2:188712000-188712200 Enhancers Liver Liver
40 chr2:188712000-188712600 Enhancers Duodenum Mucosa Duodenum
41 chr2:188712200-188712400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr2:188712200-188712400 Flanking Active TSS Liver Liver
43 chr2:188712200-188712600 Enhancers Fetal Kidney kidney
44 chr2:188712200-188713400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr2:188712400-188713200 Enhancers Liver Liver
46 chr2:188712400-188717200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr2:188712600-188713000 Weak transcription Fetal Kidney kidney
48 chr2:188713000-188713200 Enhancers Fetal Kidney kidney
49 chr2:188713000-188713400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr2:188713200-188713800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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