Variant report

Variant nsv584704
Chromosome Location chr2:234526680-234569137
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234525600-234528200 Active TSS Rectal Mucosa Donor 29 rectum
2 chr2:234526600-234526800 Enhancers Duodenum Mucosa Duodenum
3 chr2:234526600-234526800 Active TSS Rectal Mucosa Donor 31 rectum
4 chr2:234526800-234528800 Weak transcription Duodenum Mucosa Duodenum
5 chr2:234526800-234528800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr2:234528800-234529000 Enhancers Duodenum Mucosa Duodenum
7 chr2:234528800-234529600 Enhancers Rectal Mucosa Donor 31 rectum
8 chr2:234537800-234538000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
9 chr2:234538000-234544600 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr2:234544400-234545200 Enhancers Rectal Mucosa Donor 31 rectum
11 chr2:234544600-234544800 Enhancers Duodenum Mucosa Duodenum
12 chr2:234544600-234544800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
13 chr2:234544600-234545000 Enhancers Colonic Mucosa Colon
14 chr2:234544800-234547600 Active TSS Duodenum Mucosa Duodenum
15 chr2:234544800-234548400 Active TSS Rectal Mucosa Donor 29 rectum
16 chr2:234545200-234545600 Active TSS Rectal Mucosa Donor 31 rectum
17 chr2:234545200-234545800 Active TSS Colonic Mucosa Colon
18 chr2:234545200-234546000 Active TSS Rectal Smooth Muscle rectum
19 chr2:234545600-234546000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
20 chr2:234545800-234547400 Weak transcription Colonic Mucosa Colon
21 chr2:234546000-234546800 Active TSS Rectal Mucosa Donor 31 rectum
22 chr2:234546800-234547200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
23 chr2:234547200-234548000 Active TSS Rectal Mucosa Donor 31 rectum
24 chr2:234547400-234547800 Active TSS Colonic Mucosa Colon
25 chr2:234547400-234547800 Enhancers NHEK skin
26 chr2:234547400-234548200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr2:234547400-234548200 Enhancers HMEC breast
28 chr2:234547600-234548200 Enhancers Duodenum Mucosa Duodenum
29 chr2:234547800-234554000 Weak transcription Colonic Mucosa Colon
30 chr2:234548000-234548200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
31 chr2:234548200-234548800 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr2:234548200-234549400 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr2:234548400-234549000 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr2:234549400-234550000 Enhancers Rectal Mucosa Donor 31 rectum
35 chr2:234549400-234550000 Enhancers Stomach Mucosa stomach
36 chr2:234550000-234551400 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr2:234550000-234551400 Weak transcription Stomach Mucosa stomach
38 chr2:234551400-234551600 Enhancers Rectal Mucosa Donor 31 rectum
39 chr2:234551400-234551800 Enhancers Stomach Mucosa stomach
40 chr2:234551600-234551800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
41 chr2:234551600-234551800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr2:234551600-234551800 Enhancers Esophagus oesophagus
43 chr2:234551600-234553800 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr2:234551800-234559200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr2:234552400-234552600 Enhancers Esophagus oesophagus
46 chr2:234553800-234554000 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr2:234553800-234554600 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
48 chr2:234554000-234554800 ZNF genes & repeats Colonic Mucosa Colon
49 chr2:234554200-234555000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
50 chr2:234554600-234587800 Weak transcription Rectal Mucosa Donor 31 rectum

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