Variant report

Variant	nsv5874
Chromosome Location	chr7:100734048-100744472
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:943)
CpG islands
(count:672)
Chromatin interactive
region (count:51)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:943 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:100743325-100743751	K562	blood:	n/a	n/a
2	ARID3A	chr7:100738202-100738410	K562	blood:	n/a	n/a
3	ARID3A	chr7:100743481-100743726	HepG2	liver:	n/a	n/a
4	ATF2	chr7:100743213-100743957	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF3	chr7:100743422-100743812	K562	blood:	n/a	n/a
6	ATF3	chr7:100738026-100738519	A549	lung:	n/a	chr7:100738097-100738106
7	ATF3	chr7:100743229-100743813	K562	blood:	n/a	n/a
8	ATF3	chr7:100743223-100743988	A549	lung:	n/a	n/a
9	ATF3	chr7:100743220-100744038	A549	lung:	n/a	n/a
10	BACH1	chr7:100743246-100744275	H1-hESC	embryonic stem cell:	n/a	chr7:100743605-100743619
11	BACH1	chr7:100743255-100744208	K562	blood:	n/a	chr7:100743605-100743619
12	BATF	chr7:100743420-100743639	GM12878	blood:	n/a	chr7:100743563-100743574
13	BCL3	chr7:100743142-100744036	A549	lung:	n/a	n/a
14	BCL3	chr7:100737986-100738615	A549	lung:	n/a	chr7:100738098-100738107
15	BCL3	chr7:100743124-100744383	A549	lung:	n/a	n/a
16	BCL3	chr7:100737994-100738622	A549	lung:	n/a	chr7:100738098-100738107
17	BCL3	chr7:100742311-100743005	A549	lung:	n/a	n/a
18	BCL3	chr7:100742616-100742945	GM12878	blood:	n/a	n/a
19	BHLHE40	chr7:100743405-100743750	HepG2	liver:	n/a	chr7:100743614-100743630
20	BHLHE40	chr7:100743357-100744256	K562	blood:	n/a	chr7:100743614-100743630
21	BHLHE40	chr7:100738158-100738442	K562	blood:	n/a	n/a
22	BRCA1	chr7:100743570-100743770	HepG2	liver:	n/a	n/a
23	CBX3	chr7:100743243-100744255	K562	blood:	n/a	n/a
24	CBX3	chr7:100738123-100738563	K562	blood:	n/a	n/a
25	CBX3	chr7:100739554-100740276	K562	blood:	n/a	n/a
26	CBX3	chr7:100738074-100738671	K562	blood:	n/a	n/a
27	CCNT2	chr7:100738207-100738403	K562	blood:	n/a	n/a
28	CCNT2	chr7:100743387-100743918	K562	blood:	n/a	n/a
29	CEBPB	chr7:100743405-100743711	HepG2	liver:	n/a	chr7:100743540-100743557
30	CEBPB	chr7:100743357-100743794	Hela-S3	cervix:	n/a	chr7:100743540-100743557
31	CEBPB	chr7:100743305-100743788	K562	blood:	n/a	chr7:100743540-100743557
32	CEBPB	chr7:100743384-100743985	IMR90	lung:	n/a	chr7:100743540-100743557
33	CEBPB	chr7:100743313-100744003	MCF-7	breast:	n/a	chr7:100743540-100743557
34	CEBPB	chr7:100743368-100743720	ECC-1	luminal epithelium:	n/a	chr7:100743540-100743557
35	CEBPB	chr7:100743284-100743866	A549	lung:	n/a	chr7:100743540-100743557
36	CEBPB	chr7:100743349-100743741	A549	lung:	n/a	chr7:100743540-100743557
37	CEBPB	chr7:100743356-100743662	H1-hESC	embryonic stem cell:	n/a	chr7:100743540-100743557
38	CEBPB	chr7:100743398-100743868	K562	blood:	n/a	chr7:100743540-100743557
39	CEBPB	chr7:100743238-100744049	A549	lung:	n/a	chr7:100743540-100743557
40	CEBPD	chr7:100743461-100743677	HepG2	liver:	n/a	n/a
41	CHD2	chr7:100743412-100743684	H1-hESC	embryonic stem cell:	n/a	n/a
42	CHD2	chr7:100743380-100743838	Hela-S3	cervix:	n/a	n/a
43	CHD2	chr7:100743594-100743958	K562	blood:	n/a	n/a
44	CHD2	chr7:100743556-100743808	HepG2	liver:	n/a	n/a
45	CREB1	chr7:100743420-100743830	A549	lung:	n/a	n/a
46	CREB1	chr7:100737776-100738126	A549	lung:	n/a	n/a
47	CREB1	chr7:100743205-100744010	A549	lung:	n/a	n/a
48	CREB1	chr7:100738130-100738491	A549	lung:	n/a	n/a
49	CTBP2	chr7:100743315-100743806	H1-hESC	embryonic stem cell:	n/a	n/a
50	CTCF	chr7:100738180-100738330	HepG2	liver:	n/a	chr7:100738288-100738309 chr7:100738287-100738303 chr7:100738289-100738302 chr7:100738286-100738304

(count:672 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:100743832-100743882	A549	lung:	n/a
2	chr7:100743832-100743882	A549	lung:	n/a
3	chr7:100739617-100739667	Hela-S3	cervix:	n/a
4	chr7:100739895-100739945	HCPEpiC	choroid plexus:	n/a
5	chr7:100735637-100735687	GM12891	blood:	n/a
6	chr7:100744067-100744117	NH-A	brain:	n/a
7	chr7:100743832-100743882	IMR90	lung:	fetal
8	chr7:100744067-100744117	PFSK-1	brain:	n/a
9	chr7:100737984-100738034	HL-60	blood:	n/a
10	chr7:100735481-100735531	HUVEC	blood vessel:	n/a
11	chr7:100738414-100738464	NT2-D1	testis:	n/a
12	chr7:100738948-100738998	SAEC	small airway:	n/a
13	chr7:100739617-100739667	A549	lung:	n/a
14	chr7:100737817-100737867	AoSMC	blood vessel:	n/a
15	chr7:100735481-100735531	T-47D	breast:	n/a
16	chr7:100735481-100735531	CMK	blood:	n/a
17	chr7:100735481-100735531	HCM	heart:	n/a
18	chr7:100739617-100739667	HAEpiC	amniotic membrane:	n/a
19	chr7:100737817-100737867	BE2_C	brain:	n/a
20	chr7:100735637-100735687	NT2-D1	testis:	n/a
21	chr7:100743732-100743782	AG09309	skin:	n/a
22	chr7:100739617-100739667	NT2-D1	testis:	n/a
23	chr7:100744067-100744117	HIPEpiC	eye:	n/a
24	chr7:100737984-100738034	H1-hESC	embryonic stem cell:	embryo
25	chr7:100737817-100737867	U87	brain:	n/a
26	chr7:100739617-100739667	T-47D	breast:	n/a
27	chr7:100738948-100738998	SK-N-SH_RA	brain:	n/a
28	chr7:100743732-100743782	Hela-S3	cervix:	n/a
29	chr7:100737817-100737867	HL-60	blood:	n/a
30	chr7:100735637-100735687	HNPCEpiC	eye:	n/a
31	chr7:100737817-100737867	ECC-1	luminal epithelium:	n/a
32	chr7:100743832-100743882	CMK	blood:	n/a
33	chr7:100743732-100743782	ECC-1	luminal epithelium:	n/a
34	chr7:100743832-100743882	AG10803	skin:	n/a
35	chr7:100737984-100738034	HIPEpiC	eye:	n/a
36	chr7:100738414-100738464	Hepatocyte	liver:	n/a
37	chr7:100737817-100737867	MCF-7	breast:	n/a
38	chr7:100735481-100735531	HIPEpiC	eye:	n/a
39	chr7:100743832-100743882	HL-60	blood:	n/a
40	chr7:100738414-100738464	AG09319	gingival:	n/a
41	chr7:100738414-100738464	ProgFib	skin:	n/a
42	chr7:100743832-100743882	H1-hESC	embryonic stem cell:	embryo
43	chr7:100743832-100743882	Caco-2	colon:	n/a
44	chr7:100743732-100743782	PrEC	prostate:	n/a
45	chr7:100737984-100738034	HCF	heart:	n/a
46	chr7:100735481-100735531	HL-60	blood:	n/a
47	chr7:100737984-100738034	MCF-7	breast:	n/a
48	chr7:100738414-100738464	HNPCEpiC	eye:	n/a
49	chr7:100735637-100735687	HCPEpiC	choroid plexus:	n/a
50	chr7:100743732-100743782	LNCaP	prostate:	n/a

(count:51 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr7:100742716..100745205-chr7:100768993..100771932,2	K562	blood:
2	chr7:100742417..100744722-chr7:100805972..100808524,3	MCF-7	breast:
3	chr7:100737822..100738831-chr7:100786945..100787929,3	K562	blood:
4	chr7:100740298..100743618-chr7:100768403..100771294,5	MCF-7	breast:
5	chr7:100744230..100748590-chr7:100780366..100783718,4	K562	blood:
6	chr7:100744152..100746979-chr7:100806016..100808822,2	K562	blood:
7	chr7:100740788..100742697-chr7:100783160..100785738,2	MCF-7	breast:
8	chr7:100744207..100746658-chr7:100768104..100769613,2	MCF-7	breast:
9	chr7:100736317..100739665-chr7:100808472..100811573,3	MCF-7	breast:
10	chr7:100737739..100738809-chr7:100780869..100782138,8	MCF-7	breast:
11	chr7:100739178..100743225-chr7:100773876..100776882,3	K562	blood:
12	chr7:100736767..100739121-chr7:100807992..100810587,2	K562	blood:
13	chr7:100481912..100484184-chr7:100739768..100741833,2	MCF-7	breast:
14	chr7:100743496..100745503-chr7:100745542..100749053,3	K562	blood:
15	chr7:100492814..100493314-chr7:100738077..100738742,2	K562	blood:
16	chr7:100486764..100489719-chr7:100736778..100738797,2	K562	blood:
17	chr7:100741507..100743688-chr7:100752212..100754188,2	K562	blood:
18	chr7:100733241..100735630-chr7:100761919..100764639,2	K562	blood:
19	chr7:100742836..100744015-chr7:100835535..100836428,3	K562	blood:
20	chr7:100741330..100743492-chr7:100880383..100882636,2	MCF-7	breast:
21	chr7:100742551..100745856-chr7:100780456..100782799,3	MCF-7	breast:
22	chr7:100737701..100741221-chr7:100750993..100753482,3	MCF-7	breast:
23	chr7:100742030..100745253-chr7:100746544..100749068,3	MCF-7	breast:
24	chr7:100730924..100734717-chr7:100859526..100862672,3	MCF-7	breast:
25	chr7:100739826..100743076-chr7:100805313..100808615,3	MCF-7	breast:
26	chr7:100737548..100738399-chr7:100812828..100813682,3	MCF-7	breast:
27	chr7:100743987..100745634-chr7:100746718..100749324,4	MCF-7	breast:
28	chr7:100742866..100743779-chr7:100781576..100782208,2	MCF-7	breast:
29	chr7:100738089..100740180-chr7:100797864..100799963,2	MCF-7	breast:
30	chr7:100738210..100739761-chr7:100744164..100746838,2	MCF-7	breast:
31	chr7:100738680..100740515-chr7:100774079..100776785,2	K562	blood:
32	chr7:100737935..100741233-chr7:100779115..100781948,4	MCF-7	breast:
33	chr7:100486155..100488924-chr7:100732323..100735470,4	MCF-7	breast:
34	chr7:100738325..100739194-chr7:100835490..100836428,2	K562	blood:
35	chr7:100486587..100489014-chr7:100735698..100737931,3	MCF-7	breast:
36	chr7:100025741..100027249-chr7:100738865..100741421,2	K562	blood:
37	chr7:100743845..100746782-chr7:100757454..100760117,2	K562	blood:
38	chr7:100741837..100746865-chr7:100749791..100753773,5	MCF-7	breast:
39	chr7:100738210..100739761-chr7:100744164..100746838,2	MCF-7	breast:
40	chr7:100743340..100745457-chr7:100777578..100780413,3	MCF-7	breast:
41	chr7:100737789..100738771-chr7:100781346..100782175,4	MCF-7	breast:
42	chr7:100738222..100738800-chr7:100787067..100787589,2	MCF-7	breast:
43	chr7:100741030..100743914-chr7:100780572..100782381,3	K562	blood:
44	chr7:100737941..100738769-chr7:100781582..100782241,2	K562	blood:
45	chr7:100737471..100742111-chr7:100770022..100773213,6	MCF-7	breast:
46	chr7:100743492..100745258-chr7:100823374..100825550,2	K562	blood:
47	chr7:100744401..100746537-chr7:100796518..100798853,2	K562	blood:
48	chr7:100738686..100741572-chr7:100742111..100744003,4	MCF-7	breast:
49	chr7:100738686..100741572-chr7:100742111..100744003,4	MCF-7	breast:
50	chr7:100743340..100745183-chr7:100770158..100771716,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TRIM56-1	chr7:100737328-100741248	ENSG00000260336.1
2	lnc-TRIM56-1	chr7:100740419-100741248	NONHSAT122448

No data

Variant related genes	Relation type
ENSG00000260336	TF binding region
ENSG00000260336	CpG island
ENSG00000128564	chromatin interactions
ENSG00000106404	chromatin interactions
ENSG00000167011	chromatin interactions
ENSG00000087087	chromatin interactions
ENSG00000078487	chromatin interactions
ENSG00000146834	chromatin interactions
ENSG00000106397	chromatin interactions
ENSG00000106367	chromatin interactions
ENSG00000176125	chromatin interactions
ENSG00000106400	chromatin interactions
ENSG00000106366	chromatin interactions

Extended variants
information (count: 444 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:444 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs114582751	chr7:100734105-100734106	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
2	rs10233905	chr7:100734113-100734114	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs544165337	chr7:100734116-100734117	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs111573274	chr7:100734131-100734132	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs185717579	chr7:100734132-100734133	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs34956432	chr7:100734138-100734139	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs532985537	chr7:100734150-100734151	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs551111026	chr7:100734168-100734169	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs559822801	chr7:100734170-100734171	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs113257156	chr7:100734237-100734238	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs76400044	chr7:100734241-100734242	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs567128209	chr7:100734247-100734248	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs11542349	chr7:100734273-100734274	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs114730084	chr7:100734316-100734317	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs571942602	chr7:100734333-100734334	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs539245738	chr7:100734341-100734342	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs554397831	chr7:100734344-100734345	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs531473828	chr7:100734387-100734388	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs191263517	chr7:100734411-100734412	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs75125431	chr7:100734420-100734421	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs576372642	chr7:100734447-100734448	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs531747434	chr7:100734455-100734456	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs181249384	chr7:100734462-100734463	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs371903881	chr7:100734471-100734472	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs187164378	chr7:100734483-100734484	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs571111205	chr7:100734558-100734559	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs577477893	chr7:100734571-100734572	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs544847343	chr7:100734599-100734600	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs116963634	chr7:100734611-100734612	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs527410825	chr7:100734651-100734652	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs374917624	chr7:100734698-100734699	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs548789934	chr7:100734700-100734701	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs369131926	chr7:100734708-100734709	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs373199234	chr7:100734711-100734712	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs368546438	chr7:100734712-100734713	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs375424854	chr7:100734713-100734714	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs370124765	chr7:100734718-100734719	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs551083974	chr7:100734788-100734789	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs531230385	chr7:100734791-100734792	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs149447681	chr7:100734862-100734863	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs572010394	chr7:100734876-100734877	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs532851680	chr7:100734895-100734896	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs530614500	chr7:100734962-100734963	Weak transcription Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs566260403	chr7:100735012-100735013	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs141187137	chr7:100735025-100735026	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs377757989	chr7:100735036-100735037	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs191502436	chr7:100735055-100735056	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs6945281	chr7:100735080-100735081	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs116643113	chr7:100735093-100735094	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs537062620	chr7:100735107-100735108	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:93)

Disease	PMID	Source
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Prostate cancer	16461572	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Malignant melanoma	17260012	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Bladder cancer	21909424	CNVD
Biliary cancer	19435499	CNVD
Myelofibrosis	22110671	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	16608533	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Liver carcinoma	19366792	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Adenocarcinoma	19607727	CNVD
Multiple myeloma	16461302	CNVD
Breast cancer	21858162	CNVD
Emphysema	19352772	CNVD
Effusion lymphoma	18079361	CNVD
Medulloblastoma	17653508	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Autism	19401682	CNVD
Neuroticism	17667963	CNVD
Breast cancer	21509527	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Prostate cancer	18632612	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Bipolar disorder	19214233	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:527 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:100729400-100736000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr7:100729400-100737800	Weak transcription	Small Intestine	intestine
3	chr7:100729400-100742600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr7:100729400-100742600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr7:100729400-100742800	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr7:100729400-100742800	Weak transcription	Brain Substantia Nigra	brain
7	chr7:100729600-100734200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr7:100729600-100735000	Weak transcription	Fetal Kidney	kidney
9	chr7:100729600-100736600	Weak transcription	NH-A	brain
10	chr7:100729600-100742800	Weak transcription	Brain Angular Gyrus	brain
11	chr7:100729800-100734800	Genic enhancers	Primary T cells fromperipheralblood	blood
12	chr7:100730200-100734600	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
13	chr7:100730200-100734800	Strong transcription	Fetal Thymus	thymus
14	chr7:100730200-100735000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr7:100730200-100735200	Strong transcription	Fetal Muscle Trunk	muscle
16	chr7:100730200-100735400	Strong transcription	Fetal Stomach	stomach
17	chr7:100730400-100734200	Strong transcription	Fetal Intestine Small	intestine
18	chr7:100730400-100734600	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr7:100730400-100734800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr7:100730400-100734800	Strong transcription	Primary T cells from cord blood	blood
21	chr7:100730400-100734800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
22	chr7:100730400-100735000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr7:100730400-100735000	Strong transcription	Primary monocytes fromperipheralblood	blood
24	chr7:100730400-100735200	Strong transcription	Monocytes-CD14+_RO01746	blood
25	chr7:100730400-100735600	Strong transcription	Primary neutrophils fromperipheralblood	blood
26	chr7:100730400-100735600	Strong transcription	Thymus	Thymus
27	chr7:100730400-100738000	Weak transcription	HepG2	liver
28	chr7:100730400-100742600	Weak transcription	Brain Inferior Temporal Lobe	brain
29	chr7:100730600-100734400	Genic enhancers	Primary T helper cells PMA-I stimulated	--
30	chr7:100730600-100734400	Strong transcription	NHLF	lung
31	chr7:100730600-100734800	Strong transcription	Primary B cells from peripheral blood	blood
32	chr7:100730600-100734800	Strong transcription	Rectal Mucosa Donor 29	rectum
33	chr7:100730600-100735000	Strong transcription	Fetal Intestine Large	intestine
34	chr7:100730600-100735200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr7:100730600-100737000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr7:100730600-100737200	Weak transcription	HUVEC	blood vessel
37	chr7:100730600-100737800	Weak transcription	K562	blood
38	chr7:100730600-100742800	Weak transcription	Brain Anterior Caudate	brain
39	chr7:100730600-100742800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
40	chr7:100730800-100734400	Strong transcription	Liver	Liver
41	chr7:100730800-100734600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
42	chr7:100730800-100738000	Weak transcription	Stomach Mucosa	stomach
43	chr7:100730800-100743200	Weak transcription	Primary hematopoietic stem cells	blood
44	chr7:100731000-100734600	Strong transcription	Dnd41	blood
45	chr7:100731000-100735600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr7:100731200-100734800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
47	chr7:100731200-100736600	Weak transcription	HMEC	breast
48	chr7:100731200-100742800	Weak transcription	Brain Cingulate Gyrus	brain
49	chr7:100731400-100734600	Strong transcription	Duodenum Smooth Muscle	Duodenum
50	chr7:100731400-100734600	Strong transcription	Fetal Muscle Leg	muscle

The 2.0 version of rSNPBase

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