Variant report

Variant	nsv587486
Chromosome Location	chr21:41232560-41254456
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF3	chr21:41239113-41239444	H1-hESC	embryonic stem cell:	n/a	n/a
2	BACH1	chr21:41232491-41232813	H1-hESC	embryonic stem cell:	n/a	n/a
3	BRCA1	chr21:41239171-41239604	H1-hESC	embryonic stem cell:	n/a	n/a
4	BRCA1	chr21:41239110-41239310	Hela-S3	cervix:	n/a	n/a
5	CEBPB	chr21:41239070-41239415	H1-hESC	embryonic stem cell:	n/a	chr21:41239294-41239302
6	CHD2	chr21:41239092-41239499	H1-hESC	embryonic stem cell:	n/a	n/a
7	CREB1	chr21:41239041-41239467	H1-hESC	embryonic stem cell:	n/a	n/a
8	CTCF	chr21:41238800-41238950	HAc	cerebellar:	n/a	n/a
9	CTCF	chr21:41239160-41239310	HVMF	connective:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
10	CTCF	chr21:41239051-41239415	IMR90	lung:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
11	CTCF	chr21:41238820-41238970	AG09319	gingival:	n/a	n/a
12	CTCF	chr21:41238980-41239502	HCT-116	colon:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
13	CTCF	chr21:41239100-41239250	HCM	heart:	n/a	chr21:41239234-41239241 chr21:41239231-41239247
14	CTCF	chr21:41238904-41239602	A549	lung:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
15	CTCF	chr21:41239160-41239310	HPF	lung:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
16	CTCF	chr21:41239110-41239440	MCF-7	breast:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
17	CTCF	chr21:41239160-41239310	HRPEpiC	eye:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
18	CTCF	chr21:41238520-41238670	SAEC	small airway:	n/a	n/a
19	CTCF	chr21:41239120-41239270	HL-60	blood:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
20	CTCF	chr21:41239101-41239443	MCF-7	breast:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
21	CTCF	chr21:41239140-41239290	HCT-116	colon:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
22	CTCF	chr21:41239060-41239362	A549	lung:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
23	CTCF	chr21:41239106-41239398	K562	blood:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
24	CTCF	chr21:41239180-41239330	HPAF	blood vessel:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
25	CTCF	chr21:41239680-41239830	K562	blood:	n/a	n/a
26	CTCF	chr21:41239101-41239498	H1-hESC	embryonic stem cell:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
27	CTCF	chr21:41239140-41239290	Caco-2	colon:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
28	CTCF	chr21:41253642-41253798	H1-hESC	embryonic stem cell:	n/a	n/a
29	CTCF	chr21:41241220-41241370	GM12873	blood:	n/a	n/a
30	CTCF	chr21:41239160-41239310	GM12869	blood:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
31	CTCF	chr21:41253600-41253750	HRPEpiC	eye:	n/a	n/a
32	CTCF	chr21:41239130-41239329	SK-N-SH_RA	brain:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
33	CTCF	chr21:41239060-41239210	HAc	cerebellar:	n/a	n/a
34	CTCF	chr21:41253618-41253850	H1-hESC	embryonic stem cell:	n/a	n/a
35	CTCF	chr21:41239240-41239390	HMEC	breast:	n/a	chr21:41239244-41239253 chr21:41239240-41239253
36	CTCF	chr21:41239141-41239347	HepG2	liver:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
37	CTCF	chr21:41239086-41239407	ECC-1	luminal epithelium:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
38	CTCF	chr21:41239140-41239290	BE2_C	brain:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
39	CTCF	chr21:41239160-41239310	AG04450	lung:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
40	CTCF	chr21:41239108-41239360	Spleen_OC	spleen:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
41	CTCF	chr21:41239160-41239310	AG04449	skin:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
42	CTCF	chr21:41239100-41239250	WI-38	lung:	n/a	chr21:41239234-41239241 chr21:41239231-41239247
43	CTCF	chr21:41239140-41239290	GM12801	blood:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
44	CTCF	chr21:41238800-41238950	NHEK	skin:	n/a	n/a
45	CTCF	chr21:41239180-41239330	GM12875	blood:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
46	CTCF	chr21:41238500-41238650	GM12866	blood:	n/a	n/a
47	CTCF	chr21:41239200-41239350	MCF-7	breast:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
48	CTCF	chr21:41239140-41239290	HCM	heart:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
49	CTCF	chr21:41239120-41239270	NHEK	skin:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247
50	CTCF	chr21:41239109-41239454	MCF-7	breast:	n/a	chr21:41239244-41239253 chr21:41239234-41239241 chr21:41239240-41239253 chr21:41239231-41239247

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr21:41239042-41239092	HEEpiC	esophagus:	n/a
2	chr21:41238517-41238567	SAEC	small airway:	n/a
3	chr21:41239042-41239092	HIPEpiC	eye:	n/a
4	chr21:41238517-41238567	GM12891	blood:	n/a
5	chr21:41239323-41239373	PANC-1	pancreas:	n/a
6	chr21:41239214-41239264	ovcar-3	ovarian:	n/a
7	chr21:41239488-41239538	PrEC	prostate:	n/a
8	chr21:41239323-41239373	Hepatocyte	liver:	n/a
9	chr21:41238940-41238990	PrEC	prostate:	n/a
10	chr21:41239488-41239538	HNPCEpiC	eye:	n/a
11	chr21:41239214-41239264	SK-N-MC	brain:	n/a
12	chr21:41239488-41239538	U87	brain:	n/a
13	chr21:41239042-41239092	ProgFib	skin:	n/a
14	chr21:41239323-41239373	AG09309	skin:	n/a
15	chr21:41238517-41238567	SK-N-SH	brain:	n/a
16	chr21:41239323-41239373	ECC-1	luminal epithelium:	n/a
17	chr21:41238517-41238567	NB4	blood:	n/a
18	chr21:41238517-41238567	PrEC	prostate:	n/a
19	chr21:41239488-41239538	SKMC	muscle:	n/a
20	chr21:41239042-41239092	HMEC	breast:	n/a
21	chr21:41239488-41239538	GM19239	blood:	n/a
22	chr21:41239323-41239373	HNPCEpiC	eye:	n/a
23	chr21:41239323-41239373	NHBE	bronchial:	n/a
24	chr21:41239042-41239092	AG04449	skin:	fetal
25	chr21:41239323-41239373	SAEC	small airway:	n/a
26	chr21:41239214-41239264	ECC-1	luminal epithelium:	n/a
27	chr21:41239214-41239264	GM12878	blood:	n/a
28	chr21:41238517-41238567	PANC-1	pancreas:	n/a
29	chr21:41238517-41238567	Jurkat	blood:	n/a
30	chr21:41239214-41239264	ProgFib	skin:	n/a
31	chr21:41239323-41239373	HCT-116	colon:	n/a
32	chr21:41239042-41239092	GM19239	blood:	n/a
33	chr21:41239042-41239092	SAEC	small airway:	n/a
34	chr21:41239488-41239538	A549	lung:	n/a
35	chr21:41239042-41239092	MCF-7	breast:	n/a
36	chr21:41239042-41239092	HCF	heart:	n/a
37	chr21:41239488-41239538	IMR90	lung:	fetal
38	chr21:41238940-41238990	LNCaP	prostate:	n/a
39	chr21:41239488-41239538	HIPEpiC	eye:	n/a
40	chr21:41239042-41239092	MCF10A-Er-Src	breast:	n/a
41	chr21:41238940-41238990	A549	lung:	n/a
42	chr21:41239488-41239538	HPAEpiC	pulmonary alveolar:	n/a
43	chr21:41239488-41239538	AG09319	gingival:	n/a
44	chr21:41239042-41239092	AG09309	skin:	n/a
45	chr21:41239488-41239538	HAEpiC	amniotic membrane:	n/a
46	chr21:41238940-41238990	HEK293	kidney:	embryo
47	chr21:41238940-41238990	AG04450	lung:	fetal
48	chr21:41238940-41238990	SAEC	small airway:	n/a
49	chr21:41238940-41238990	RPTEC	kidney:	n/a
50	chr21:41239042-41239092	Hela-S3	cervix:	n/a

No.	Distal block	Cell Line	Cell type
1	chr21:41224580..41228479-chr21:41241139..41244869,4	MCF-7	breast:
2	chr21:41231503..41233658-chr21:41243578..41245931,2	MCF-7	breast:
3	chr21:41159990..41160890-chr21:41235008..41236199,4	MCF-7	breast:
4	chr21:41233930..41236092-chr21:41237066..41238677,3	MCF-7	breast:
5	chr21:41221313..41224011-chr21:41232632..41234576,2	MCF-7	breast:
6	chr21:41253703..41255362-chr21:41264614..41266527,2	K562	blood:
7	chr21:41238992..41241524-chr21:41243505..41245852,2	K562	blood:
8	chr21:41216229..41218575-chr21:41247366..41250074,2	K562	blood:
9	chr21:41233930..41236092-chr21:41237066..41238677,3	MCF-7	breast:
10	chr21:41239313..41241818-chr21:41246509..41248604,2	MCF-7	breast:
11	chr21:41235043..41237223-chr21:41241443..41243363,2	MCF-7	breast:
12	chr21:41235043..41237223-chr21:41241443..41243363,2	MCF-7	breast:
13	chr21:41160024..41160878-chr21:41233096..41233742,2	MCF-7	breast:
14	chr21:41224780..41227558-chr21:41231799..41233536,2	MCF-7	breast:
15	chr21:41231503..41233658-chr21:41243578..41245931,2	MCF-7	breast:
16	chr21:41238734..41240734-chr21:41254117..41255860,2	MCF-7	breast:
17	chr21:41236712..41238651-chr9:137001241..137003469,2	MCF-7	breast:
18	chr21:41242466..41243215-chr6:142468060..142468716,2	MCF-7	breast:

Variant related genes	Relation type
PCP4	TF binding region
PCP4	CpG island
ENSG00000009844	chromatin interactions
ENSG00000183036	chromatin interactions

Extended variants
information (count: 940 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:940 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs380673	chr21:41232560-41232561	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs549783236	chr21:41232589-41232590	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs544693196	chr21:41232709-41232710	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs368416062	chr21:41232747-41232748	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs538748597	chr21:41232766-41232767	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs543167553	chr21:41232879-41232880	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs565547477	chr21:41232938-41232939	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs574815492	chr21:41232962-41232963	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs183522239	chr21:41233019-41233020	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs554339155	chr21:41233041-41233042	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs114845807	chr21:41233056-41233057	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs543333607	chr21:41233072-41233073	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs556545959	chr21:41233111-41233112	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs408654	chr21:41233118-41233119	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs545529932	chr21:41233299-41233300	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs67841606	chr21:41233318-41233319	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs527784477	chr21:41233348-41233349	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs189059694	chr21:41233395-41233396	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs149394152	chr21:41233401-41233402	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs530453565	chr21:41233405-41233406	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs144789612	chr21:41233442-41233443	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs193015465	chr21:41233469-41233470	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs113953994	chr21:41233491-41233492	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs556553136	chr21:41233505-41233506	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs527973340	chr21:41233559-41233560	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs569649402	chr21:41233570-41233571	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs544699870	chr21:41233574-41233575	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs2837262	chr21:41233613-41233614	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs565483803	chr21:41233644-41233645	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs534401814	chr21:41233652-41233653	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs548013832	chr21:41233670-41233671	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs185638558	chr21:41233683-41233684	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs190110681	chr21:41233746-41233747	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs556939183	chr21:41233789-41233790	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs576389994	chr21:41233807-41233808	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs539084943	chr21:41233838-41233839	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs558984275	chr21:41233875-41233876	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs372423862	chr21:41233925-41233926	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs572608963	chr21:41233944-41233945	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs76292891	chr21:41233987-41233988	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs148100319	chr21:41234013-41234014	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs79607668	chr21:41234038-41234039	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs75245872	chr21:41234136-41234137	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs76378940	chr21:41234169-41234170	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs563781980	chr21:41234184-41234185	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs370093779	chr21:41234196-41234197	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs374309616	chr21:41234233-41234234	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs532662494	chr21:41234263-41234264	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs565097121	chr21:41234269-41234270	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs551794527	chr21:41234281-41234282	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:70)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Down syndrome	17412756	CNVD
Down syndrome	17576883	CNVD
Acute promyelocytic leukemia	19109227	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Renal cell carcinoma	19461508	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Prostate cancer	19156837	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
lymphocytic leukemia	21291569	CNVD
Melanoma	18172304	CNVD
Autism	22958593	CNVD
Schizophrenia	22958593	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Wilms tumour	21544195	CNVD
Ewing''s sarcoma	17952124	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute myeloid leukemia	16864856	CNVD
Mental retardation	21031080	CNVD
Polymicrogyria	21031080	CNVD
periventricular nodular heterotopia	21031080	CNVD
Myelodysplastic syndrome	21606161	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Autism	18414403	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Breast cancer	21858162	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	17899364	CNVD
Down syndrome	20877625	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Cancer	20164920	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Prostate cancer	21147910	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Prostate cancer	17245344	CNVD
Prostate cancer	20473283	CNVD
Chordoma	18071362	CNVD
Cancer	20164919	CNVD
Breast cancer	21509527	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:89 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:41223200-41241000	Weak transcription	Right Atrium	heart
2	chr21:41230600-41238200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr21:41232000-41234400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr21:41232400-41232600	Enhancers	Right Ventricle	heart
5	chr21:41233400-41233600	Enhancers	Stomach Mucosa	stomach
6	chr21:41233600-41235400	Weak transcription	Stomach Mucosa	stomach
7	chr21:41234200-41234400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr21:41234200-41235800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr21:41234400-41235600	Enhancers	Fetal Lung	lung
10	chr21:41234400-41245600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr21:41235200-41235600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr21:41235400-41235800	Enhancers	Stomach Mucosa	stomach
13	chr21:41235800-41239400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr21:41238200-41238800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr21:41238800-41239000	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr21:41238800-41239000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
17	chr21:41238800-41239400	Enhancers	iPS-15b Cell Line	embryonic stem cell
18	chr21:41238800-41239400	Enhancers	iPS-20b Cell Line	embryonic stem cell
19	chr21:41238800-41239600	Enhancers	HUES6 Cell Line	embryonic stem cell
20	chr21:41238800-41239600	Enhancers	Fetal Brain Male	brain
21	chr21:41238800-41241000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr21:41239000-41239200	Enhancers	Colon Smooth Muscle	Colon
23	chr21:41239000-41239600	Enhancers	HUES64 Cell Line	embryonic stem cell
24	chr21:41239000-41239600	Enhancers	Fetal Kidney	kidney
25	chr21:41239000-41239800	Enhancers	iPS-18 Cell Line	embryonic stem cell
26	chr21:41239000-41240000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
27	chr21:41239200-41239400	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
28	chr21:41239200-41239400	Enhancers	Brain Hippocampus Middle	brain
29	chr21:41239200-41239400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
30	chr21:41239200-41239600	Enhancers	Primary B cells from peripheral blood	blood
31	chr21:41239200-41239600	Active TSS	Colon Smooth Muscle	Colon
32	chr21:41239200-41239600	Active TSS	Fetal Brain Female	brain
33	chr21:41239200-41239600	Bivalent Enhancer	Fetal Stomach	stomach
34	chr21:41239200-41240000	Active TSS	Esophagus	oesophagus
35	chr21:41239200-41240600	Active TSS	Rectal Smooth Muscle	rectum
36	chr21:41239200-41241000	Active TSS	Pancreatic Islets	Pancreatic Islet
37	chr21:41239200-41243200	Active TSS	Brain Anterior Caudate	brain
38	chr21:41239400-41239600	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
39	chr21:41239400-41239600	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
40	chr21:41239400-41240000	Active TSS	Brain Angular Gyrus	brain
41	chr21:41239400-41240200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr21:41239400-41240600	Active TSS	Brain Hippocampus Middle	brain
43	chr21:41239400-41241800	Active TSS	Brain Germinal Matrix	brain
44	chr21:41239600-41239800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
45	chr21:41239600-41239800	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
46	chr21:41239600-41240000	Bivalent/Poised TSS	Fetal Intestine Large	intestine
47	chr21:41239600-41240400	Weak transcription	Colon Smooth Muscle	Colon
48	chr21:41239600-41240400	Weak transcription	Fetal Brain Male	brain
49	chr21:41239600-41240400	Weak transcription	Fetal Kidney	kidney
50	chr21:41239800-41240600	Active TSS	Duodenum Smooth Muscle	Duodenum

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