Variant report
Variant | nsv588588 |
---|---|
Chromosome Location | chr22:23250737-23276454 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:543)
- CpG islands (count:0)
- Chromatin interactive region (count:36)
- LncRNA region (count:6)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:23258750-23259076 | HepG2 | liver: | n/a | n/a |
2 | ATF1 | chr22:23266964-23266992 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr22:23253446-23253456 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr22:23262737-23263489 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr22:23270547-23272244 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr22:23254917-23254918 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr22:23251232-23251667 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr22:23252055-23252437 | K562 | blood: | n/a | n/a |
9 | ATF2 | chr22:23270597-23271768 | GM12878 | blood: | n/a | n/a |
10 | ATF2 | chr22:23273983-23274459 | GM12878 | blood: | n/a | n/a |
11 | ATF2 | chr22:23270734-23271601 | GM12878 | blood: | n/a | n/a |
12 | ATF2 | chr22:23273248-23273796 | GM12878 | blood: | n/a | n/a |
13 | ATF2 | chr22:23273903-23274587 | GM12878 | blood: | n/a | n/a |
14 | ATF3 | chr22:23270541-23271262 | K562 | blood: | n/a | n/a |
15 | ATF3 | chr22:23268441-23268917 | K562 | blood: | n/a | chr22:23268625-23268635 |
16 | BACH1 | chr22:23259715-23259720 | K562 | blood: | n/a | n/a |
17 | BACH1 | chr22:23261304-23261342 | K562 | blood: | n/a | n/a |
18 | BACH1 | chr22:23265361-23265362 | K562 | blood: | n/a | n/a |
19 | BATF | chr22:23274036-23274442 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr22:23270934-23271250 | GM12878 | blood: | n/a | chr22:23271120-23271130 chr22:23271115-23271126 chr22:23271116-23271126 |
21 | BATF | chr22:23270779-23271374 | GM12878 | blood: | n/a | chr22:23271120-23271130 chr22:23271115-23271126 chr22:23271116-23271126 |
22 | BCL11A | chr22:23270885-23271275 | GM12878 | blood: | n/a | chr22:23271010-23271019 |
23 | BCL11A | chr22:23274059-23274393 | GM12878 | blood: | n/a | chr22:23274243-23274252 |
24 | BCL11A | chr22:23274000-23274473 | GM12878 | blood: | n/a | chr22:23274243-23274252 |
25 | BCL11A | chr22:23270716-23271416 | GM12878 | blood: | n/a | chr22:23271010-23271019 |
26 | BCL3 | chr22:23270747-23271458 | GM12878 | blood: | n/a | chr22:23271010-23271019 |
27 | BCL3 | chr22:23273934-23274465 | GM12878 | blood: | n/a | chr22:23274243-23274252 |
28 | BCL3 | chr22:23274032-23274445 | GM12878 | blood: | n/a | chr22:23274243-23274252 |
29 | BCLAF1 | chr22:23273701-23274572 | GM12878 | blood: | n/a | chr22:23274243-23274252 chr22:23274497-23274505 |
30 | BCLAF1 | chr22:23270598-23272047 | GM12878 | blood: | n/a | chr22:23271010-23271019 |
31 | BCLAF1 | chr22:23273762-23274473 | GM12878 | blood: | n/a | chr22:23274243-23274252 |
32 | BCLAF1 | chr22:23270454-23271872 | GM12878 | blood: | n/a | chr22:23271010-23271019 |
33 | BHLHE40 | chr22:23268447-23268725 | K562 | blood: | n/a | n/a |
34 | BHLHE40 | chr22:23271484-23272089 | K562 | blood: | n/a | n/a |
35 | BHLHE40 | chr22:23268416-23268638 | GM12878 | blood: | n/a | n/a |
36 | BHLHE40 | chr22:23258770-23259136 | HepG2 | liver: | n/a | n/a |
37 | BHLHE40 | chr22:23273898-23274538 | GM12878 | blood: | n/a | n/a |
38 | BHLHE40 | chr22:23270735-23271154 | K562 | blood: | n/a | n/a |
39 | BHLHE40 | chr22:23269789-23269977 | K562 | blood: | n/a | n/a |
40 | BHLHE40 | chr22:23270732-23271541 | GM12878 | blood: | n/a | n/a |
41 | BHLHE40 | chr22:23263078-23263135 | K562 | blood: | n/a | n/a |
42 | BHLHE40 | chr22:23276443-23276742 | GM12878 | blood: | n/a | n/a |
43 | BRCA1 | chr22:23256178-23256216 | GM12878 | blood: | n/a | n/a |
44 | CBX3 | chr22:23270017-23270812 | K562 | blood: | n/a | n/a |
45 | CBX3 | chr22:23269562-23271923 | K562 | blood: | n/a | n/a |
46 | CEBPB | chr22:23273661-23274635 | GM12878 | blood: | n/a | n/a |
47 | CEBPB | chr22:23267990-23268365 | MCF-7 | breast: | n/a | n/a |
48 | CEBPB | chr22:23271956-23272179 | K562 | blood: | n/a | n/a |
49 | CEBPB | chr22:23272113-23272205 | HepG2 | liver: | n/a | n/a |
50 | CEBPB | chr22:23270152-23271804 | GM12878 | blood: | n/a | n/a |
No data |
(count:36 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:23266292..23268666-chr22:23279796..23283281,3 | K562 | blood: | |
2 | chr22:23230851..23232657-chr22:23258084..23260097,2 | K562 | blood: | |
3 | chr22:23234328..23239223-chr22:23249114..23253993,6 | K562 | blood: | |
4 | chr22:23157854..23159575-chr22:23265576..23269716,3 | K562 | blood: | |
5 | chr22:23249460..23256264-chr22:23263399..23267410,8 | K562 | blood: | |
6 | chr22:23254052..23256994-chr22:23268482..23271052,2 | K562 | blood: | |
7 | chr22:23261117..23263641-chr22:23264707..23267231,3 | K562 | blood: | |
8 | chr22:23258107..23260177-chr22:23268082..23270661,2 | K562 | blood: | |
9 | chr22:23262831..23264788-chr22:23270674..23273625,2 | K562 | blood: | |
10 | chr22:23219235..23219863-chr22:23270722..23271390,2 | K562 | blood: | |
11 | chr22:23270409..23272197-chr22:23283086..23285103,2 | K562 | blood: | |
12 | chr22:23251853..23252558-chr22:23295506..23296354,3 | MCF-7 | breast: | |
13 | chr22:23245468..23247565-chr22:23249258..23251335,3 | K562 | blood: | |
14 | chr22:23261117..23263641-chr22:23264707..23267231,3 | K562 | blood: | |
15 | chr22:23183438..23186320-chr22:23270023..23271683,2 | K562 | blood: | |
16 | chr22:23248970..23251030-chr22:23266059..23268328,2 | K562 | blood: | |
17 | chr22:23211923..23213773-chr22:23255638..23258101,2 | K562 | blood: | |
18 | chr22:23249788..23251920-chr22:23270655..23273406,3 | K562 | blood: | |
19 | chr22:23269604..23273139-chr22:23273414..23276481,4 | K562 | blood: | |
20 | chr22:23258677..23261321-chr22:23267871..23270694,4 | K562 | blood: | |
21 | chr22:23237287..23240210-chr22:23254703..23257164,2 | K562 | blood: | |
22 | chr22:23263458..23265124-chr22:23267456..23270407,2 | K562 | blood: | |
23 | chr22:23249460..23256264-chr22:23263399..23267410,8 | K562 | blood: | |
24 | chr22:23269604..23273139-chr22:23273414..23276481,4 | K562 | blood: | |
25 | chr22:23231973..23234722-chr22:23268972..23271345,2 | MCF-7 | breast: | |
26 | chr22:23246871..23249530-chr22:23253643..23256082,2 | K562 | blood: | |
27 | chr22:23257526..23260347-chr22:23270856..23273684,2 | MCF-7 | breast: | |
28 | chr22:23261255..23263406-chr22:23270232..23272923,2 | MCF-7 | breast: | |
29 | chr22:23258107..23260177-chr22:23268082..23270661,2 | K562 | blood: | |
30 | chr22:23249788..23251920-chr22:23270655..23273406,3 | K562 | blood: | |
31 | chr22:23262649..23264269-chr22:23275725..23277382,2 | K562 | blood: | |
32 | chr22:23236796..23239209-chr22:23258890..23261514,2 | K562 | blood: | |
33 | chr22:23271545..23273567-chr22:23289644..23291552,2 | K562 | blood: | |
34 | chr22:23248970..23251030-chr22:23266059..23268328,2 | K562 | blood: | |
35 | chr22:23269159..23271034-chr22:23285763..23287373,2 | K562 | blood: | |
36 | chr22:23152432..23153103-chr22:23254207..23254852,2 | K562 | blood: |
(count:6 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-D87017.1-3 | chr22:23252998-23253245 | NONHSAT083835 |
2 | lnc-D87017.1-2 | chr22:23257805-23258097 | NONHSAT083836 |
3 | lnc-RTDR1-4 | chr22:23264978-23265153 | NONHSAT083834 |
4 | lnc-RTDR1-4 | chr22:23262147-23262154 | NONHSAT083834 |
5 | lnc-RTDR1-4 | chr22:23261700-23261973 | NONHSAT083834 |
6 | lnc-RTDR1-4 | chr22:23264861-23264965 | NONHSAT083834 |
No data |
No data |
Variant related genes | Relation type |
---|---|
IGLJ5 | TF binding region |
IGLC7 | TF binding region |
IGLJ7 | TF binding region |
IGLJ6 | TF binding region |
IGLJ4 | TF binding region |
IGLC4 | TF binding region |
IGLC5 | TF binding region |
IGLC6 | TF binding region |
ENSG00000211681 | chromatin interactions |
ENSG00000211672 | chromatin interactions |
ENSG00000211674 | chromatin interactions |
ENSG00000211685 | chromatin interactions |
ENSG00000211679 | chromatin interactions |
ENSG00000211678 | chromatin interactions |
ENSG00000254029 | chromatin interactions |
ENSG00000222037 | chromatin interactions |
ENSG00000211675 | chromatin interactions |
ENSG00000254030 | chromatin interactions |
ENSG00000211680 | chromatin interactions |
ENSG00000211682 | chromatin interactions |
ENSG00000211684 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs1475930 | chr22:23250737-23250738 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
2 | rs147930831 | chr22:23250780-23250781 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
3 | rs373430146 | chr22:23250784-23250785 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
4 | rs140718100 | chr22:23250852-23250853 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
5 | rs574214580 | chr22:23250889-23250890 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
6 | rs565183367 | chr22:23250909-23250910 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
7 | rs200986823 | chr22:23250917-23250918 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
8 | rs10605925 | chr22:23250918-23250919 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
9 | rs587744371 | chr22:23250919-23250920 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
10 | rs200457585 | chr22:23250920-23250921 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
11 | rs397722905 | chr22:23250922-23250923 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
12 | rs373875973 | chr22:23250923-23250924 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
13 | rs370788940 | chr22:23250929-23250930 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
14 | rs559760484 | chr22:23250939-23250940 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
15 | rs528527385 | chr22:23251040-23251041 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
16 | rs201110999 | chr22:23251046-23251047 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
17 | rs11090194 | chr22:23251053-23251054 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
18 | rs201638896 | chr22:23251054-23251055 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
19 | rs147117802 | chr22:23251066-23251067 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
20 | rs73399104 | chr22:23251094-23251095 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
21 | rs138126236 | chr22:23251097-23251098 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
22 | rs529925337 | chr22:23251102-23251103 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
23 | rs561703356 | chr22:23251114-23251115 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
24 | rs546525311 | chr22:23251115-23251116 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
25 | rs566122638 | chr22:23251153-23251154 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
26 | rs112382969 | chr22:23251172-23251173 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
27 | rs10690144 | chr22:23251174-23251175 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
28 | rs67553303 | chr22:23251175-23251176 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
29 | rs151051033 | chr22:23251179-23251180 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
30 | rs72564469 | chr22:23251180-23251181 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
31 | rs10637699 | chr22:23251181-23251182 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
32 | rs199576913 | chr22:23251182-23251183 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
33 | rs538296118 | chr22:23251231-23251232 | Weak transcription Enhancers Strong transcription | Chromatin interactive region | 5 gene(s) | Overlapped CNVs | n/a |
34 | rs187766527 | chr22:23251288-23251289 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
35 | rs192064653 | chr22:23251359-23251360 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 6 gene(s) | Overlapped CNVs | n/a |
36 | rs537964363 | chr22:23251394-23251395 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 6 gene(s) | Overlapped CNVs | n/a |
37 | rs183959383 | chr22:23251412-23251413 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
38 | rs143670216 | chr22:23251438-23251439 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
39 | rs368984505 | chr22:23251440-23251441 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
40 | rs574202415 | chr22:23251444-23251445 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
41 | rs74505484 | chr22:23251454-23251455 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
42 | rs553741808 | chr22:23251460-23251461 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
43 | rs143280515 | chr22:23251479-23251480 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
44 | rs148334783 | chr22:23251480-23251481 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
45 | rs8140373 | chr22:23251500-23251501 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
46 | rs565291003 | chr22:23251521-23251522 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
47 | rs533578726 | chr22:23251542-23251543 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
48 | rs187667956 | chr22:23251592-23251593 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
49 | rs533311785 | chr22:23251595-23251596 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
50 | rs6003387 | chr22:23251602-23251603 | Weak transcription Enhancers Strong transcription | TF binding regionChromatin interactive region | 7 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Breast cancer | 21858162 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Developmental delay | 21147756 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Asthma | 21956041 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Systemic lupus erythematosus | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
22q11.23 microdeletion syndrome | 19193630 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Chronic myeloid leukemia | 21384125 | CNVD |
Autism | 20841430 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 21785460 | CNVD |
Medullary thyroid carcinoma | 18765511 | CNVD |
Lung cancer | 18438408 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Ependymoma | 20639864 | CNVD |
Cancer | 20164919 | CNVD |
Breast cancer | 22522925 | CNVD |
Schizophrenia | 17989066 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:23247600-23251800 | Weak transcription | Dnd41 | blood |
2 | chr22:23249400-23250800 | Enhancers | GM12878-XiMat | blood |
3 | chr22:23249800-23258400 | Enhancers | Primary B cells from peripheral blood | blood |
4 | chr22:23249800-23270800 | Strong transcription | Right Atrium | heart |
5 | chr22:23250600-23251800 | Weak transcription | Primary B cells from cord blood | blood |
6 | chr22:23250800-23251800 | Weak transcription | GM12878-XiMat | blood |
7 | chr22:23251800-23254000 | Enhancers | Dnd41 | blood |
8 | chr22:23251800-23254000 | Enhancers | GM12878-XiMat | blood |
9 | chr22:23251800-23256400 | Enhancers | Primary B cells from cord blood | blood |
10 | chr22:23252000-23252400 | Enhancers | Primary monocytes fromperipheralblood | blood |
11 | chr22:23252200-23253000 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
12 | chr22:23252200-23253000 | Enhancers | Monocytes-CD14+_RO01746 | blood |
13 | chr22:23252400-23252600 | Enhancers | Fetal Thymus | thymus |
14 | chr22:23252400-23252600 | Bivalent Enhancer | Stomach Smooth Muscle | stomach |
15 | chr22:23252400-23256400 | Weak transcription | Primary monocytes fromperipheralblood | blood |
16 | chr22:23253000-23253200 | Enhancers | Spleen | Spleen |
17 | chr22:23253000-23253600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
18 | chr22:23253000-23256200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
19 | chr22:23253200-23253800 | Weak transcription | Spleen | Spleen |
20 | chr22:23253600-23253800 | Bivalent Enhancer | Primary T cells fromperipheralblood | blood |
21 | chr22:23253600-23253800 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
22 | chr22:23253800-23254000 | Enhancers | Spleen | Spleen |
23 | chr22:23253800-23255800 | Weak transcription | Fetal Thymus | thymus |
24 | chr22:23253800-23256000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
25 | chr22:23254000-23255200 | Weak transcription | Dnd41 | blood |
26 | chr22:23254000-23256000 | Weak transcription | GM12878-XiMat | blood |
27 | chr22:23254000-23268800 | Weak transcription | Spleen | Spleen |
28 | chr22:23254800-23255000 | Enhancers | HSMMtube | muscle |
29 | chr22:23255200-23256000 | Enhancers | Dnd41 | blood |
30 | chr22:23255200-23256400 | Weak transcription | HSMMtube | muscle |
31 | chr22:23255200-23257800 | Enhancers | Fetal Muscle Leg | muscle |
32 | chr22:23255400-23259400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
33 | chr22:23255800-23256800 | Enhancers | Primary hematopoietic stem cells | blood |
34 | chr22:23255800-23256800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
35 | chr22:23255800-23257200 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
36 | chr22:23255800-23257400 | Enhancers | Fetal Thymus | thymus |
37 | chr22:23256000-23256800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
38 | chr22:23256000-23257000 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
39 | chr22:23256000-23257200 | Flanking Active TSS | Dnd41 | blood |
40 | chr22:23256000-23257800 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
41 | chr22:23256000-23257800 | Enhancers | GM12878-XiMat | blood |
42 | chr22:23256200-23256800 | Enhancers | Monocytes-CD14+_RO01746 | blood |
43 | chr22:23256400-23256800 | Enhancers | Primary monocytes fromperipheralblood | blood |
44 | chr22:23256400-23256800 | Flanking Active TSS | Primary B cells from cord blood | blood |
45 | chr22:23256400-23257200 | Enhancers | HSMMtube | muscle |
46 | chr22:23256800-23257800 | Enhancers | Primary B cells from cord blood | blood |
47 | chr22:23257000-23257200 | Bivalent Enhancer | Fetal Adrenal Gland | Adrenal Gland |
48 | chr22:23257200-23257600 | Enhancers | Dnd41 | blood |
49 | chr22:23257200-23257800 | Enhancers | Brain Inferior Temporal Lobe | brain |
50 | chr22:23257200-23258200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |