Variant report

Variant	nsv589294
Chromosome Location	chr3:438253-719554
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1308)
CpG islands
(count:490)
Chromatin interactive
region (count:27)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:3)

(count:1308 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:534692-534822	HepG2	liver:	n/a	n/a
2	ARID3A	chr3:455772-456068	HepG2	liver:	n/a	chr3:455850-455866
3	BACH1	chr3:577662-577951	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr3:516562-516874	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr3:541423-541496	H1-hESC	embryonic stem cell:	n/a	n/a
6	BATF	chr3:599789-600089	GM12878	blood:	n/a	chr3:599953-599962
7	BATF	chr3:515014-515376	GM12878	blood:	n/a	chr3:515252-515263
8	BATF	chr3:462357-462600	GM12878	blood:	n/a	chr3:462485-462494
9	BATF	chr3:638972-639242	GM12878	blood:	n/a	chr3:639093-639102
10	BATF	chr3:599827-600084	GM12878	blood:	n/a	chr3:599953-599962
11	BATF	chr3:505464-505768	GM12878	blood:	n/a	n/a
12	BATF	chr3:515030-515408	GM12878	blood:	n/a	chr3:515252-515263
13	BATF	chr3:462277-462661	GM12878	blood:	n/a	chr3:462485-462494
14	BCLAF1	chr3:599656-600200	GM12878	blood:	n/a	chr3:599779-599788 chr3:599826-599835
15	BHLHE40	chr3:543200-543216	GM12878	blood:	n/a	n/a
16	BHLHE40	chr3:462348-462658	GM12878	blood:	n/a	n/a
17	BRCA1	chr3:674381-674581	H1-hESC	embryonic stem cell:	n/a	n/a
18	BRCA1	chr3:649451-649478	Hela-S3	cervix:	n/a	n/a
19	BRCA1	chr3:639591-639851	Hela-S3	cervix:	n/a	n/a
20	BRCA1	chr3:467465-468300	Hela-S3	cervix:	n/a	n/a
21	BRCA1	chr3:463605-463647	Hela-S3	cervix:	n/a	n/a
22	BRCA1	chr3:638578-639330	Hela-S3	cervix:	n/a	n/a
23	CEBPB	chr3:555007-555386	Hela-S3	cervix:	n/a	n/a
24	CEBPB	chr3:526407-526558	H1-hESC	embryonic stem cell:	n/a	n/a
25	CEBPB	chr3:650039-650244	HepG2	liver:	n/a	chr3:650073-650084 chr3:650075-650084
26	CEBPB	chr3:700997-701241	H1-hESC	embryonic stem cell:	n/a	chr3:701126-701139 chr3:701128-701137 chr3:701128-701137 chr3:701128-701137
27	CEBPB	chr3:544919-545200	A549	lung:	n/a	chr3:545063-545076 chr3:545064-545075
28	CEBPB	chr3:697395-697928	Hela-S3	cervix:	n/a	n/a
29	CEBPB	chr3:672488-672700	HepG2	liver:	n/a	chr3:672554-672567 chr3:672555-672566
30	CEBPB	chr3:534600-534964	HepG2	liver:	n/a	chr3:534767-534778
31	CEBPB	chr3:450769-450941	H1-hESC	embryonic stem cell:	n/a	n/a
32	CEBPB	chr3:701078-701278	A549	lung:	n/a	chr3:701126-701139 chr3:701128-701137 chr3:701128-701137 chr3:701128-701137
33	CEBPB	chr3:544942-545225	HepG2	liver:	n/a	chr3:545063-545076 chr3:545064-545075
34	CEBPB	chr3:468815-469191	Hela-S3	cervix:	n/a	chr3:468996-469009 chr3:469100-469117 chr3:468998-469009
35	CEBPB	chr3:438012-438371	IMR90	lung:	n/a	chr3:438182-438195 chr3:438184-438193
36	CEBPB	chr3:466898-468265	Hela-S3	cervix:	n/a	n/a
37	CEBPB	chr3:450750-451019	A549	lung:	n/a	n/a
38	CEBPB	chr3:611097-611344	HepG2	liver:	n/a	chr3:611201-611212
39	CEBPB	chr3:650024-650224	A549	lung:	n/a	chr3:650073-650084 chr3:650075-650084
40	CEBPB	chr3:438003-438367	A549	lung:	n/a	chr3:438182-438195 chr3:438184-438193
41	CEBPB	chr3:473205-473536	HepG2	liver:	n/a	chr3:473347-473358
42	CEBPB	chr3:494829-495089	A549	lung:	n/a	n/a
43	CEBPB	chr3:544910-545217	Hela-S3	cervix:	n/a	chr3:545063-545076 chr3:545064-545075
44	CEBPB	chr3:637765-638119	Hela-S3	cervix:	n/a	n/a
45	CEBPB	chr3:458278-458461	A549	lung:	n/a	chr3:458369-458380 chr3:458369-458380 chr3:458369-458382 chr3:458369-458382
46	CEBPB	chr3:672472-672697	A549	lung:	n/a	chr3:672554-672567 chr3:672555-672566
47	CEBPB	chr3:526427-526685	HepG2	liver:	n/a	n/a
48	CEBPB	chr3:452335-452549	HepG2	liver:	n/a	chr3:452447-452458
49	CEBPB	chr3:438022-438326	H1-hESC	embryonic stem cell:	n/a	chr3:438182-438195 chr3:438184-438193
50	CEBPB	chr3:545112-545116	K562	blood:	n/a	n/a

(count:490 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:523375-523425	CMK	blood:	n/a
2	chr3:501673-501723	AG10803	skin:	n/a
3	chr3:523375-523425	CMK	blood:	n/a
4	chr3:501673-501723	AG10803	skin:	n/a
5	chr3:577964-578014	IMR90	lung:	fetal
6	chr3:447414-447464	AG04450	lung:	fetal
7	chr3:501673-501723	HL-60	blood:	n/a
8	chr3:491979-492029	HAEpiC	amniotic membrane:	n/a
9	chr3:447414-447464	HNPCEpiC	eye:	n/a
10	chr3:523375-523425	ECC-1	luminal epithelium:	n/a
11	chr3:501673-501723	SAEC	small airway:	n/a
12	chr3:447414-447464	HRPEpiC	eye:	n/a
13	chr3:491979-492029	Caco-2	colon:	n/a
14	chr3:523012-523062	Caco-2	colon:	n/a
15	chr3:577964-578014	HNPCEpiC	eye:	n/a
16	chr3:491979-492029	SKMC	muscle:	n/a
17	chr3:523012-523062	SKMC	muscle:	n/a
18	chr3:523012-523062	H1-hESC	embryonic stem cell:	embryo
19	chr3:577629-577679	GM12891	blood:	n/a
20	chr3:577964-578014	PFSK-1	brain:	n/a
21	chr3:577629-577679	Caco-2	colon:	n/a
22	chr3:501673-501723	Hela-S3	cervix:	n/a
23	chr3:491979-492029	NH-A	brain:	n/a
24	chr3:523375-523425	HCT-116	colon:	n/a
25	chr3:501673-501723	PANC-1	pancreas:	n/a
26	chr3:523012-523062	MCF10A-Er-Src	breast:	n/a
27	chr3:523012-523062	GM12878	blood:	n/a
28	chr3:577821-577871	K562	blood:	n/a
29	chr3:577629-577679	MCF-7	breast:	n/a
30	chr3:501673-501723	LNCaP	prostate:	n/a
31	chr3:447414-447464	T-47D	breast:	n/a
32	chr3:577629-577679	GM19239	blood:	n/a
33	chr3:523375-523425	NB4	blood:	n/a
34	chr3:577629-577679	AG09309	skin:	n/a
35	chr3:501673-501723	HPAEpiC	pulmonary alveolar:	n/a
36	chr3:523012-523062	Jurkat	blood:	n/a
37	chr3:577964-578014	NB4	blood:	n/a
38	chr3:577821-577871	GM19239	blood:	n/a
39	chr3:491979-492029	HRE	kidney:	n/a
40	chr3:577964-578014	GM19239	blood:	n/a
41	chr3:577964-578014	PANC-1	pancreas:	n/a
42	chr3:491979-492029	SK-N-MC	brain:	n/a
43	chr3:447414-447464	ECC-1	luminal epithelium:	n/a
44	chr3:523012-523062	PFSK-1	brain:	n/a
45	chr3:523375-523425	GM19239	blood:	n/a
46	chr3:577964-578014	AG04449	skin:	fetal
47	chr3:577629-577679	GM12878	blood:	n/a
48	chr3:577629-577679	HUVEC	blood vessel:	n/a
49	chr3:523375-523425	HIPEpiC	eye:	n/a
50	chr3:447414-447464	SK-N-MC	brain:	n/a

(count:27 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:522873..523625-chr3:674344..674995,2	MCF-7	breast:
2	chr3:674217..674800-chr3:1123463..1123990,2	MCF-7	breast:
3	chr3:453296..456199-chr3:456966..458950,2	K562	blood:
4	chr21:9533639..9536328-chr3:614645..617390,2	MCF-7	breast:
5	chr3:457571..459756-chr3:462210..465015,2	K562	blood:
6	chr3:709932..711493-chr3:712317..715172,2	K562	blood:
7	chr3:512741..514299-chr3:528430..530623,2	K562	blood:
8	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:
9	chr3:496434..499262-chr3:500586..502601,2	K562	blood:
10	chr3:709932..711493-chr3:712317..715172,2	K562	blood:
11	chr21:9517250..9519290-chr3:632442..635070,2	MCF-7	breast:
12	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
13	chr3:674203..674975-chr3:2197712..2198482,2	MCF-7	breast:
14	chr3:554700..557337-chr3:557649..560284,2	K562	blood:
15	chr3:522873..523625-chr3:674344..674995,2	MCF-7	breast:
16	chr3:554700..557337-chr3:557649..560284,2	K562	blood:
17	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
18	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
19	chr3:457571..459756-chr3:462210..465015,2	K562	blood:
20	chr21:9537493..9539688-chr3:612236..614804,2	MCF-7	breast:
21	chr3:455533..456082-chr3:893341..894026,2	MCF-7	breast:
22	chr3:512741..514299-chr3:528430..530623,2	K562	blood:
23	chr3:453296..456199-chr3:456966..458950,2	K562	blood:
24	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
25	chr3:703062..705164-chr3:828470..830008,2	K562	blood:
26	chr3:496434..499262-chr3:500586..502601,2	K562	blood:
27	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CHL1-6	chr3:552914-553010	ucscGeneNc_uc003boy_1
2	lnc-CHL1-3	chr3:633788-633866	ENSG00000224957
3	lnc-CHL1-3	chr3:577936-578010	ENSG00000224957
4	lnc-IL5RA-14	chr3:659472-659997	NONHSAT087571
5	lnc-CHL1-6	chr3:608788-608866	ucscGeneNc_uc003boy_1
6	lnc-CHL1-3	chr3:577941-579275	NONHSAT087570
7	lnc-CHL1-3	chr3:633788-633866	NR_110118

No data

(count:3 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	CHL1	hsa-miR-10a-5p	chr3:450171-450192
2	CHL1	hsa-miR-10a-5p	chr3:450185-450191
3	CHL1	hsa-miR-181a-5p	chr3:448562-448584

Variant related genes	Relation type
ENSG00000224957	TF binding region
ENSG00000238075	TF binding region
ENSG00000224957	CpG island
ENSG00000238075	CpG island
DCBLD2	miRNA target sites

Extended variants
information (count: 6310 )
Associated
traits (count: 91 )

Variant overlapped rSNPs/rCNVs (count:6310 , 50 per page) page: 1 2 3 4 5 6 7 ... 127

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3773376	chr3:438253-438254	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs570912284	chr3:438263-438264	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs548771212	chr3:438277-438278	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs552906405	chr3:438307-438308	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs138433262	chr3:438342-438343	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs200600268	chr3:438345-438346	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs537778283	chr3:438378-438379	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs184554208	chr3:438421-438422	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs563467534	chr3:438439-438440	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs34598905	chr3:438486-438487	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs9851187	chr3:438518-438519	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs142834931	chr3:438559-438560	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs188338751	chr3:438564-438565	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs570478402	chr3:438566-438567	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs528347462	chr3:438575-438576	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs546622094	chr3:438599-438600	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs561666661	chr3:438633-438634	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs528926863	chr3:438644-438645	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs7612327	chr3:438656-438657	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs568936274	chr3:438662-438663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs539179449	chr3:438669-438670	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs7652221	chr3:438722-438723	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs7652303	chr3:438760-438761	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs143307871	chr3:438777-438778	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs574887376	chr3:438833-438834	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs553298804	chr3:438885-438886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs148296458	chr3:438932-438933	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs535489988	chr3:438958-438959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs57953394	chr3:438983-438984	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs575648489	chr3:439001-439002	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs554541241	chr3:439004-439005	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs545990835	chr3:439022-439023	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs75865973	chr3:439081-439082	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs573003988	chr3:439107-439108	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs540501825	chr3:439130-439131	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs191930848	chr3:439159-439160	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs3773375	chr3:439164-439165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs550564357	chr3:439173-439174	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs562467612	chr3:439183-439184	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs1157869	chr3:439195-439196	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs551228699	chr3:439252-439253	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs571021881	chr3:439261-439262	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs564892452	chr3:439325-439326	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs142408257	chr3:439360-439361	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs565191407	chr3:439387-439388	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs546872326	chr3:439394-439395	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs34351904	chr3:439429-439430	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs376133634	chr3:439473-439474	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs184279692	chr3:439485-439486	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs535750700	chr3:439505-439506	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:91)

Disease	PMID	Source
Cancer	20164920	CNVD
Lung cancer	16618734	CNVD
Autism	18349135	CNVD
Breast cancer	20409316	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Intellectual disability	22045946	CNVD
Squamous cell cancer	19607727	CNVD
Gastric adenocarcinoma	19115996	CNVD
sporadic birth defects	19047251	CNVD
Mental retardation	17124404	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Sudden cardiac death	19188705	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Neuroblastoma	18923191	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD
Autism	22543975	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Tetralogy of Fallot	22912587	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	20685689	CNVD
Multiple myeloma	17550852	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
early-passage human iPS cells	21368824	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD

Chromatin state (count:478 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:397600-453400	Weak transcription	Brain Angular Gyrus	brain
2	chr3:416200-447400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr3:421000-453600	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr3:424200-453600	Weak transcription	Brain Cingulate Gyrus	brain
5	chr3:426000-446400	Weak transcription	Adipose Nuclei	Adipose
6	chr3:427600-442200	Weak transcription	Brain Substantia Nigra	brain
7	chr3:429000-453000	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr3:430600-451600	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr3:431600-443600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr3:431800-451400	Weak transcription	Fetal Brain Female	brain
11	chr3:434000-439200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr3:434000-443800	Weak transcription	Ovary	ovary
13	chr3:434400-449400	Weak transcription	Brain Germinal Matrix	brain
14	chr3:434600-443400	Weak transcription	Brain Anterior Caudate	brain
15	chr3:438200-438600	Enhancers	HSMMtube	muscle
16	chr3:438200-443400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr3:439200-447800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr3:443400-444000	Strong transcription	Brain Anterior Caudate	brain
19	chr3:443400-447200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
20	chr3:443600-445600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr3:443800-444800	Strong transcription	Ovary	ovary
22	chr3:444000-444400	Weak transcription	Brain Anterior Caudate	brain
23	chr3:444400-445000	Strong transcription	Brain Anterior Caudate	brain
24	chr3:444800-445000	ZNF genes & repeats	Ovary	ovary
25	chr3:445000-446600	Weak transcription	Ovary	ovary
26	chr3:445000-449600	Weak transcription	Brain Anterior Caudate	brain
27	chr3:445600-446800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr3:446800-448200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr3:447200-451400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
30	chr3:447800-449800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr3:448200-450000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr3:452200-452800	Active TSS	Aorta	Aorta
33	chr3:452800-453400	Enhancers	Aorta	Aorta
34	chr3:453000-453200	Enhancers	Cortex derived primary cultured neurospheres	brain
35	chr3:453000-453400	Enhancers	Fetal Brain Male	brain
36	chr3:453400-453600	Enhancers	Brain Angular Gyrus	brain
37	chr3:453600-453800	Bivalent Enhancer	Brain Cingulate Gyrus	brain
38	chr3:453600-453800	Enhancers	Brain Inferior Temporal Lobe	brain
39	chr3:459800-460000	Enhancers	Fetal Intestine Small	intestine
40	chr3:459800-460400	Enhancers	Fetal Intestine Large	intestine
41	chr3:460200-461200	Weak transcription	Fetal Intestine Small	intestine
42	chr3:460400-461200	Weak transcription	Fetal Intestine Large	intestine
43	chr3:461200-461400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
44	chr3:461200-461400	Enhancers	Fetal Intestine Large	intestine
45	chr3:461200-461800	Enhancers	Fetal Intestine Small	intestine
46	chr3:465800-469400	Enhancers	Hela-S3	cervix
47	chr3:466200-467600	Enhancers	Cortex derived primary cultured neurospheres	brain
48	chr3:466800-467200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr3:467000-467200	Enhancers	Brain Germinal Matrix	brain
50	chr3:467200-469000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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