Variant report

Variant	nsv590304
Chromosome Location	chr3:52517206-52529266
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:294)
CpG islands
(count:916)
Chromatin interactive
region (count:14)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:294 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BCL11A	chr3:52526755-52526935	GM12878	blood:	n/a	n/a
2	CEBPB	chr3:52527354-52527481	HepG2	liver:	n/a	chr3:52527442-52527453
3	CEBPB	chr3:52528182-52528242	H1-hESC	embryonic stem cell:	n/a	n/a
4	CEBPB	chr3:52528164-52528178	A549	lung:	n/a	n/a
5	CEBPB	chr3:52527298-52527691	Hela-S3	cervix:	n/a	chr3:52527442-52527453
6	CEBPB	chr3:52528166-52528219	HepG2	liver:	n/a	n/a
7	CEBPB	chr3:52528168-52528179	K562	blood:	n/a	n/a
8	CEBPB	chr3:52527320-52527622	HepG2	liver:	n/a	chr3:52527442-52527453
9	CEBPB	chr3:52528113-52528156	Hela-S3	cervix:	n/a	n/a
10	CEBPB	chr3:52527390-52527584	K562	blood:	n/a	chr3:52527442-52527453
11	CHD2	chr3:52527423-52527618	H1-hESC	embryonic stem cell:	n/a	chr3:52527473-52527483
12	CTCF	chr3:52517180-52517330	BJ	skin:	n/a	n/a
13	CTCF	chr3:52517420-52517570	SAEC	small airway:	n/a	chr3:52517437-52517450
14	CTCF	chr3:52528560-52528710	HepG2	liver:	n/a	n/a
15	CTCF	chr3:52517500-52517650	HCPEpiC	choroid plexus:	n/a	n/a
16	CTCF	chr3:52517340-52517490	AG04450	lung:	n/a	chr3:52517437-52517450
17	CTCF	chr3:52529160-52529310	HBMEC	blood vessel:	n/a	n/a
18	CTCF	chr3:52517400-52517550	HMEC	breast:	n/a	chr3:52517437-52517450
19	CTCF	chr3:52528491-52528680	H1-hESC	embryonic stem cell:	n/a	n/a
20	CTCF	chr3:52517320-52517470	AG04449	skin:	n/a	chr3:52517437-52517450
21	CTCF	chr3:52528566-52528582	MCF-7	breast:	n/a	n/a
22	CTCF	chr3:52517300-52517450	NHEK	skin:	n/a	chr3:52517437-52517450
23	CTCF	chr3:52528536-52528639	MCF-7	breast:	n/a	n/a
24	CTCF	chr3:52517340-52517490	HPF	lung:	n/a	chr3:52517437-52517450
25	CTCF	chr3:52517420-52517570	HBMEC	blood vessel:	n/a	chr3:52517437-52517450
26	CTCF	chr3:52528528-52528640	MCF-7	breast:	n/a	n/a
27	CTCF	chr3:52517280-52517430	NHEK	skin:	n/a	n/a
28	CTCF	chr3:52517380-52517530	HepG2	liver:	n/a	chr3:52517437-52517450
29	CTCF	chr3:52524920-52525070	HCPEpiC	choroid plexus:	n/a	n/a
30	CTCF	chr3:52528520-52528670	GM12871	blood:	n/a	n/a
31	CTCF	chr3:52517460-52517610	BJ	skin:	n/a	n/a
32	CTCF	chr3:52517404-52517440	H1-hESC	embryonic stem cell:	n/a	n/a
33	CTCF	chr3:52528460-52528610	WERI-Rb-1	eye:	n/a	n/a
34	CTCF	chr3:52527812-52527861	Lung_OC	lung:	n/a	n/a
35	CTCF	chr3:52517380-52517530	HFF	foreskin:	n/a	chr3:52517437-52517450
36	CTCF	chr3:52517460-52517610	NHDF-neo	bronchial:	n/a	n/a
37	CTCF	chr3:52520418-52520446	GM10266	blood:	n/a	n/a
38	CTCF	chr3:52517480-52517630	HEEpiC	esophagus:	n/a	n/a
39	CTCF	chr3:52517660-52517810	NHDF-neo	bronchial:	n/a	chr3:52517722-52517732
40	CTCF	chr3:52528584-52528593	MCF-7	breast:	n/a	n/a
41	CTCF	chr3:52518500-52518650	SAEC	small airway:	n/a	n/a
42	EGR1	chr3:52524753-52525016	K562	blood:	n/a	chr3:52524920-52524930
43	FOS	chr3:52529036-52530423	HUVEC	blood vessel:	n/a	chr3:52529953-52529962 chr3:52529949-52529960 chr3:52529952-52529962 chr3:52529952-52529962 chr3:52529952-52529962 chr3:52529951-52529962 chr3:52529952-52529962
44	FOS	chr3:52524711-52525340	HUVEC	blood vessel:	n/a	chr3:52525112-52525123 chr3:52525114-52525122
45	FOSL2	chr3:52527368-52527959	HepG2	liver:	n/a	n/a
46	GATA2	chr3:52528956-52530190	HUVEC	blood vessel:	n/a	chr3:52529954-52529963 chr3:52529951-52529960
47	GATA2	chr3:52524525-52525446	HUVEC	blood vessel:	n/a	chr3:52525235-52525245 chr3:52524944-52524961
48	JUN	chr3:52524928-52525324	HUVEC	blood vessel:	n/a	chr3:52525114-52525122
49	MAX	chr3:52528108-52528309	NB4	blood:	n/a	chr3:52528214-52528223 chr3:52528215-52528222
50	MAX	chr3:52529068-52530148	NB4	blood:	n/a	chr3:52529952-52529961 chr3:52529888-52529897 chr3:52529903-52529913

(count:916 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:52526520-52526570	HCPEpiC	choroid plexus:	n/a
2	chr3:52526520-52526570	HCPEpiC	choroid plexus:	n/a
3	chr3:52517742-52517792	AoSMC	blood vessel:	n/a
4	chr3:52529085-52529135	CMK	blood:	n/a
5	chr3:52529064-52529114	RPTEC	kidney:	n/a
6	chr3:52526263-52526313	HIPEpiC	eye:	n/a
7	chr3:52522591-52522641	HCM	heart:	n/a
8	chr3:52526235-52526285	BJ	skin:	n/a
9	chr3:52519802-52519852	AG09319	gingival:	n/a
10	chr3:52528955-52529005	Hela-S3	cervix:	n/a
11	chr3:52528714-52528764	HUVEC	blood vessel:	n/a
12	chr3:52522246-52522296	HRPEpiC	eye:	n/a
13	chr3:52526520-52526570	BJ	skin:	n/a
14	chr3:52529085-52529135	GM12891	blood:	n/a
15	chr3:52529064-52529114	NHBE	bronchial:	n/a
16	chr3:52523650-52523700	HAEpiC	amniotic membrane:	n/a
17	chr3:52528714-52528764	NH-A	brain:	n/a
18	chr3:52517742-52517792	HRPEpiC	eye:	n/a
19	chr3:52519802-52519852	HCF	heart:	n/a
20	chr3:52526263-52526313	Jurkat	blood:	n/a
21	chr3:52522591-52522641	Caco-2	colon:	n/a
22	chr3:52528714-52528764	AG10803	skin:	n/a
23	chr3:52521930-52521980	HCPEpiC	choroid plexus:	n/a
24	chr3:52523650-52523700	PANC-1	pancreas:	n/a
25	chr3:52526520-52526570	SKMC	muscle:	n/a
26	chr3:52529195-52529245	SK-N-SH	brain:	n/a
27	chr3:52517742-52517792	HPAEpiC	pulmonary alveolar:	n/a
28	chr3:52529195-52529245	BJ	skin:	n/a
29	chr3:52529064-52529114	NB4	blood:	n/a
30	chr3:52526356-52526406	AG04450	lung:	fetal
31	chr3:52526235-52526285	HNPCEpiC	eye:	n/a
32	chr3:52526520-52526570	ovcar-3	ovarian:	n/a
33	chr3:52526356-52526406	HepG2	liver:	n/a
34	chr3:52526235-52526285	HepG2	liver:	n/a
35	chr3:52528955-52529005	HRE	kidney:	n/a
36	chr3:52526263-52526313	HAEpiC	amniotic membrane:	n/a
37	chr3:52526235-52526285	K562	blood:	n/a
38	chr3:52528955-52529005	Caco-2	colon:	n/a
39	chr3:52529064-52529114	AoSMC	blood vessel:	n/a
40	chr3:52526235-52526285	HCT-116	colon:	n/a
41	chr3:52522591-52522641	BE2_C	brain:	n/a
42	chr3:52523650-52523700	AG09319	gingival:	n/a
43	chr3:52526356-52526406	GM12891	blood:	n/a
44	chr3:52522591-52522641	HRE	kidney:	n/a
45	chr3:52522591-52522641	RPTEC	kidney:	n/a
46	chr3:52529085-52529135	IMR90	lung:	fetal
47	chr3:52526520-52526570	HMEC	breast:	n/a
48	chr3:52522246-52522296	BJ	skin:	n/a
49	chr3:52526520-52526570	Jurkat	blood:	n/a
50	chr3:52522246-52522296	HCM	heart:	n/a

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:52517051..52518693-chr3:52528843..52530538,2	K562	blood:
2	chr3:52488362..52490407-chr3:52528579..52530282,2	K562	blood:
3	chr3:52525356..52528300-chr3:52566814..52568456,2	MCF-7	breast:
4	chr3:52527621..52529302-chr3:52531817..52533690,2	K562	blood:
5	chr12:46777478..46778461-chr3:52529014..52529621,2	NB4	blood:
6	chr3:52527250..52529955-chr3:52567199..52569414,2	MCF-7	breast:
7	chr3:52517904..52520222-chr3:52520994..52523318,2	K562	blood:
8	chr3:52525628..52528041-chr3:52561895..52563443,2	K562	blood:
9	chr3:52518722..52521518-chr3:52521798..52523318,2	K562	blood:
10	chr3:52514786..52517540-chr3:52524026..52525964,2	K562	blood:
11	chr3:52517647..52519848-chr3:52728042..52731004,2	K562	blood:
12	chr3:52523610..52525398-chr3:52527726..52530497,3	K562	blood:
13	chr3:52514786..52517540-chr3:52524026..52525964,2	K562	blood:
14	chr3:52517051..52518693-chr3:52528843..52530538,2	K562	blood:

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	NISCH	hsa-miR-16-5p	chr3:52526890-52526897
2	NISCH	hsa-miR-16-5p	chr3:52526876-52526897

Variant related genes	Relation type
NISCH	TF binding region
STAB1	TF binding region
NISCH	CpG island
STAB1	CpG island
ENSG00000257261	chromatin interactions
ENSG00000168268	chromatin interactions
ENSG00000168273	chromatin interactions
ENSG00000010327	chromatin interactions
ENSG00000016864	chromatin interactions
ENSG00000010322	chromatin interactions

Extended variants
information (count: 627 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:627 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs728408	chr3:52517206-52517207	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs559391508	chr3:52517207-52517208	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs572899121	chr3:52517243-52517244	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs143024250	chr3:52517268-52517269	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs563496360	chr3:52517271-52517272	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs575048392	chr3:52517286-52517287	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs542330145	chr3:52517314-52517315	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs187760388	chr3:52517337-52517338	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs564041008	chr3:52517371-52517372	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs147471320	chr3:52517395-52517396	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs115106118	chr3:52517416-52517417	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs374715342	chr3:52517420-52517421	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs528102258	chr3:52517421-52517422	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs535611425	chr3:52517428-52517429	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs573510288	chr3:52517446-52517447	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs549516962	chr3:52517482-52517483	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs546559235	chr3:52517483-52517484	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs569449525	chr3:52517531-52517532	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs77760554	chr3:52517532-52517533	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs7615208	chr3:52517536-52517537	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs192239314	chr3:52517550-52517551	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs372678055	chr3:52517567-52517568	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs539416402	chr3:52517580-52517581	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs532835132	chr3:52517583-52517584	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs552723138	chr3:52517590-52517591	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs369971815	chr3:52517608-52517609	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs572878083	chr3:52517617-52517618	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs541488435	chr3:52517647-52517648	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs545364474	chr3:52517691-52517692	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs138403964	chr3:52517743-52517744	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs530597499	chr3:52517758-52517759	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs550943032	chr3:52517780-52517781	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs79984698	chr3:52517809-52517810	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs564028796	chr3:52517855-52517856	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs372364712	chr3:52517860-52517861	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs78604929	chr3:52517862-52517863	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs560254742	chr3:52517902-52517903	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs569479801	chr3:52517903-52517904	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs184622299	chr3:52517950-52517951	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs549453926	chr3:52517977-52517978	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs569383348	chr3:52518041-52518042	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs565492662	chr3:52518050-52518051	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs112079617	chr3:52518057-52518058	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs550326480	chr3:52518066-52518067	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs78119615	chr3:52518082-52518083	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs570391387	chr3:52518096-52518097	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs571888670	chr3:52518117-52518118	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs534258098	chr3:52518155-52518156	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs554462468	chr3:52518168-52518169	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs142200083	chr3:52518237-52518238	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:93)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	21785460	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Bladder cancer	21909424	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Septo-optic dysplasia	21572526	CNVD
Biliary cancer	19435499	CNVD
Squamous cell cancer	20885788	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
Ventriculomegaly	21325761	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Lung cancer	16618734	CNVD
Neuroblastoma	19686582	CNVD
Renal cell carcinoma	18765545	CNVD
Adrenocortical carcinoma	18281524	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:581 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52491600-52528000	Strong transcription	Thymus	Thymus
2	chr3:52491800-52524000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr3:52491800-52527000	Strong transcription	HUES64 Cell Line	embryonic stem cell
4	chr3:52491800-52528200	Strong transcription	Cortex derived primary cultured neurospheres	brain
5	chr3:52491800-52528200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr3:52492400-52517400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr3:52493000-52527800	Strong transcription	Primary T helper cells fromperipheralblood	blood
8	chr3:52498600-52527200	Strong transcription	Primary T cells fromperipheralblood	blood
9	chr3:52499400-52527800	Strong transcription	Primary T cells from cord blood	blood
10	chr3:52499600-52529200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
11	chr3:52501600-52528800	Strong transcription	Fetal Intestine Small	intestine
12	chr3:52504200-52526600	Strong transcription	H9 Cell Line	embryonic stem cell
13	chr3:52504200-52526800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
14	chr3:52504200-52527400	Strong transcription	HUES48 Cell Line	embryonic stem cell
15	chr3:52504200-52527400	Strong transcription	Primary neutrophils fromperipheralblood	blood
16	chr3:52504200-52527600	Strong transcription	Dnd41	blood
17	chr3:52504200-52527800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr3:52504200-52528000	Strong transcription	Primary B cells from peripheral blood	blood
19	chr3:52504200-52528000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr3:52504200-52528600	Strong transcription	Brain Germinal Matrix	brain
21	chr3:52504400-52517400	Strong transcription	NHEK	skin
22	chr3:52504400-52517600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
23	chr3:52504400-52523600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr3:52504400-52523800	Strong transcription	Rectal Mucosa Donor 29	rectum
25	chr3:52504400-52527400	Strong transcription	Osteobl	bone
26	chr3:52504400-52527600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr3:52504400-52527600	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
28	chr3:52504400-52528000	Strong transcription	Fetal Brain Female	brain
29	chr3:52504600-52517400	Strong transcription	Fetal Lung	lung
30	chr3:52504600-52518000	Strong transcription	Sigmoid Colon	Sigmoid Colon
31	chr3:52504800-52518000	Strong transcription	Primary T helper cells PMA-I stimulated	--
32	chr3:52504800-52518800	Strong transcription	Colonic Mucosa	Colon
33	chr3:52504800-52520000	Strong transcription	HSMM	muscle
34	chr3:52504800-52521400	Strong transcription	Fetal Intestine Large	intestine
35	chr3:52504800-52523000	Strong transcription	HUVEC	blood vessel
36	chr3:52504800-52523800	Strong transcription	Duodenum Mucosa	Duodenum
37	chr3:52504800-52527400	Strong transcription	HUES6 Cell Line	embryonic stem cell
38	chr3:52504800-52528000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
39	chr3:52505000-52517400	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
40	chr3:52505000-52517400	Strong transcription	Aorta	Aorta
41	chr3:52505000-52517400	Strong transcription	Rectal Smooth Muscle	rectum
42	chr3:52505000-52517400	Strong transcription	HepG2	liver
43	chr3:52505000-52527000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr3:52505600-52518000	Strong transcription	H1 Cell Line	embryonic stem cell
45	chr3:52506200-52523600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr3:52506400-52527400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr3:52506600-52517400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
48	chr3:52506600-52517400	Strong transcription	Brain Hippocampus Middle	brain
49	chr3:52507400-52527800	Strong transcription	Fetal Thymus	thymus
50	chr3:52508000-52523000	Weak transcription	Stomach Mucosa	stomach

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