Variant report

Variant	nsv590306
Chromosome Location	chr3:52536308-52557440
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:366)
CpG islands
(count:732)
Chromatin interactive
region (count:36)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr3:52552538-52552851	H1-hESC	embryonic stem cell:	n/a	n/a
2	BHLHE40	chr3:52546335-52546553	K562	blood:	n/a	n/a
3	BHLHE40	chr3:52541498-52541823	HepG2	liver:	n/a	n/a
4	BHLHE40	chr3:52552489-52552589	K562	blood:	n/a	n/a
5	BHLHE40	chr3:52553362-52553684	K562	blood:	n/a	n/a
6	BHLHE40	chr3:52543938-52543947	HepG2	liver:	n/a	n/a
7	CCNT2	chr3:52552915-52553206	K562	blood:	n/a	chr3:52553106-52553115
8	CEBPB	chr3:52553161-52553318	K562	blood:	n/a	n/a
9	CHD2	chr3:52553247-52553339	K562	blood:	n/a	n/a
10	CREB1	chr3:52541466-52541756	A549	lung:	n/a	n/a
11	CTCF	chr3:52544140-52544290	Caco-2	colon:	n/a	n/a
12	CTCF	chr3:52544103-52544197	NHEK	skin:	n/a	n/a
13	CTCF	chr3:52543900-52544050	HCFaa	heart:	n/a	n/a
14	CTCF	chr3:52543968-52544324	GM12878	blood:	n/a	chr3:52544286-52544299
15	CTCF	chr3:52543920-52544070	HPAF	blood vessel:	n/a	n/a
16	CTCF	chr3:52543900-52544050	HBMEC	blood vessel:	n/a	n/a
17	CTCF	chr3:52543980-52544130	GM12873	blood:	n/a	n/a
18	CTCF	chr3:52544020-52544307	K562	blood:	n/a	chr3:52544286-52544299
19	CTCF	chr3:52544060-52544210	HepG2	liver:	n/a	n/a
20	CTCF	chr3:52544063-52544247	GM12878	blood:	n/a	n/a
21	CTCF	chr3:52543927-52544424	K562	blood:	n/a	chr3:52544286-52544299
22	CTCF	chr3:52537940-52538090	GM12865	blood:	n/a	chr3:52537963-52537976
23	CTCF	chr3:52552440-52552590	Caco-2	colon:	n/a	n/a
24	CTCF	chr3:52552985-52553006	Hela-S3	cervix:	n/a	chr3:52552993-52553003
25	CTCF	chr3:52544060-52544210	GM12864	blood:	n/a	n/a
26	CTCF	chr3:52544060-52544210	HCPEpiC	choroid plexus:	n/a	n/a
27	CTCF	chr3:52552795-52553168	K562	blood:	n/a	chr3:52552993-52553003 chr3:52553001-52553014
28	CTCF	chr3:52543998-52544294	K562	blood:	n/a	n/a
29	CTCF	chr3:52543940-52544090	GM12868	blood:	n/a	n/a
30	CTCF	chr3:52544036-52544235	GM19239	blood:	n/a	n/a
31	CTCF	chr3:52543940-52544090	HUVEC	blood vessel:	n/a	n/a
32	CTCF	chr3:52543940-52544090	AoAF	blood vessel:	n/a	n/a
33	CTCF	chr3:52543919-52544016	H1-hESC	embryonic stem cell:	n/a	n/a
34	CTCF	chr3:52543980-52544250	GM12869	blood:	n/a	n/a
35	CTCF	chr3:52544110-52544207	GM10248	blood:	n/a	n/a
36	CTCF	chr3:52537022-52537057	H1-hESC	embryonic stem cell:	n/a	n/a
37	CTCF	chr3:52546280-52546430	WERI-Rb-1	eye:	n/a	chr3:52546312-52546322
38	CTCF	chr3:52552440-52552590	HBMEC	blood vessel:	n/a	n/a
39	CTCF	chr3:52544031-52544261	K562	blood:	n/a	n/a
40	CTCF	chr3:52544040-52544190	GM12864	blood:	n/a	n/a
41	CTCF	chr3:52544060-52544210	GM12870	blood:	n/a	n/a
42	CTCF	chr3:52544000-52544150	GM12866	blood:	n/a	n/a
43	CTCF	chr3:52544040-52544190	HepG2	liver:	n/a	n/a
44	CTCF	chr3:52543780-52543930	WI-38	lung:	n/a	n/a
45	CTCF	chr3:52552927-52553059	K562	blood:	n/a	chr3:52552993-52553003 chr3:52553001-52553014
46	CTCF	chr3:52543980-52544130	HCT-116	colon:	n/a	n/a
47	CTCF	chr3:52543860-52544010	AG04449	skin:	n/a	n/a
48	CTCF	chr3:52543940-52544090	A549	lung:	n/a	n/a
49	CTCF	chr3:52552949-52553066	K562	blood:	n/a	chr3:52552993-52553003 chr3:52553001-52553014
50	CTCF	chr3:52544090-52544229	H1-hESC	embryonic stem cell:	n/a	n/a

(count:732 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:52537803-52537853	K562	blood:	n/a
2	chr3:52554798-52554848	HepG2	liver:	n/a
3	chr3:52556384-52556434	HAEpiC	amniotic membrane:	n/a
4	chr3:52551074-52551124	GM06990	blood:	n/a
5	chr3:52553433-52553483	GM12892	blood:	n/a
6	chr3:52550230-52550280	HCPEpiC	choroid plexus:	n/a
7	chr3:52551074-52551124	PANC-1	pancreas:	n/a
8	chr3:52551074-52551124	Jurkat	blood:	n/a
9	chr3:52552868-52552918	HepG2	liver:	n/a
10	chr3:52556643-52556693	GM06990	blood:	n/a
11	chr3:52537803-52537853	ovcar-3	ovarian:	n/a
12	chr3:52554798-52554848	LNCaP	prostate:	n/a
13	chr3:52553433-52553483	Jurkat	blood:	n/a
14	chr3:52554798-52554848	SAEC	small airway:	n/a
15	chr3:52537803-52537853	NT2-D1	testis:	n/a
16	chr3:52554798-52554848	GM19239	blood:	n/a
17	chr3:52556643-52556693	HNPCEpiC	eye:	n/a
18	chr3:52553167-52553217	AG09319	gingival:	n/a
19	chr3:52553049-52553099	PrEC	prostate:	n/a
20	chr3:52537803-52537853	HCF	heart:	n/a
21	chr3:52556643-52556693	K562	blood:	n/a
22	chr3:52550230-52550280	NHDF-neo	bronchial:	n/a
23	chr3:52552593-52552643	NHBE	bronchial:	n/a
24	chr3:52556300-52556350	NHDF-neo	bronchial:	n/a
25	chr3:52551074-52551124	SK-N-MC	brain:	n/a
26	chr3:52551074-52551124	CMK	blood:	n/a
27	chr3:52553167-52553217	Jurkat	blood:	n/a
28	chr3:52556300-52556350	AG10803	skin:	n/a
29	chr3:52552593-52552643	CMK	blood:	n/a
30	chr3:52552868-52552918	ProgFib	skin:	n/a
31	chr3:52551074-52551124	GM12892	blood:	n/a
32	chr3:52556300-52556350	Hela-S3	cervix:	n/a
33	chr3:52537803-52537853	HPAEpiC	pulmonary alveolar:	n/a
34	chr3:52556300-52556350	AG09319	gingival:	n/a
35	chr3:52554798-52554848	HPAEpiC	pulmonary alveolar:	n/a
36	chr3:52552593-52552643	SK-N-MC	brain:	n/a
37	chr3:52556384-52556434	HCT-116	colon:	n/a
38	chr3:52554798-52554848	SK-N-SH_RA	brain:	n/a
39	chr3:52550230-52550280	GM19239	blood:	n/a
40	chr3:52553433-52553483	SK-N-SH	brain:	n/a
41	chr3:52556300-52556350	HUVEC	blood vessel:	n/a
42	chr3:52556384-52556434	NH-A	brain:	n/a
43	chr3:52537803-52537853	Caco-2	colon:	n/a
44	chr3:52537803-52537853	NH-A	brain:	n/a
45	chr3:52556384-52556434	HNPCEpiC	eye:	n/a
46	chr3:52553167-52553217	NH-A	brain:	n/a
47	chr3:52556643-52556693	PrEC	prostate:	n/a
48	chr3:52556384-52556434	SKMC	muscle:	n/a
49	chr3:52553433-52553483	ovcar-3	ovarian:	n/a
50	chr3:52553433-52553483	CMK	blood:	n/a

(count:36 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:52555579..52557218-chr3:52564676..52566664,2	MCF-7	breast:
2	chr3:52541654..52543295-chr3:52545844..52547550,2	K562	blood:
3	chr3:52531295..52534156-chr3:52543396..52545644,2	K562	blood:
4	chr3:52541629..52544116-chr3:52570482..52572184,2	MCF-7	breast:
5	chr3:52553170..52556656-chr3:52557821..52561228,3	MCF-7	breast:
6	chr3:52532062..52534916-chr3:52535199..52537993,2	K562	blood:
7	chr3:52534136..52536462-chr3:52536613..52538164,2	MCF-7	breast:
8	chr3:52535112..52538485-chr3:52564476..52567424,4	K562	blood:
9	chr3:52541025..52543370-chr3:52561947..52564840,2	K562	blood:
10	chr3:52537807..52540311-chr3:52607410..52609955,2	MCF-7	breast:
11	chr3:52535025..52537846-chr3:52565784..52568503,3	K562	blood:
12	chr3:52551111..52554473-chr3:52556873..52560591,3	MCF-7	breast:
13	chr3:52534136..52536462-chr3:52536613..52538164,2	MCF-7	breast:
14	chr3:52551484..52554158-chr3:52567066..52569157,2	MCF-7	breast:
15	chr3:52554843..52559532-chr3:52566910..52570402,7	MCF-7	breast:
16	chr3:52504996..52506918-chr3:52535565..52538055,2	MCF-7	breast:
17	chr3:52542257..52544412-chr3:52569017..52571795,2	K562	blood:
18	chr3:52545777..52548193-chr3:52552299..52554454,2	MCF-7	breast:
19	chr3:52537241..52538905-chr3:52567545..52569543,2	K562	blood:
20	chr3:52535446..52537192-chr3:52550633..52552577,2	K562	blood:
21	chr3:52537920..52539549-chr3:52569370..52573115,4	K562	blood:
22	chr3:52550660..52553610-chr3:52725143..52727667,2	K562	blood:
23	chr3:52539792..52541522-chr3:52570415..52572331,2	K562	blood:
24	chr3:52535446..52537192-chr3:52550633..52552577,2	K562	blood:
25	chr3:52551111..52554473-chr3:52556873..52560591,3	MCF-7	breast:
26	chr3:52536407..52539525-chr3:52571038..52574825,3	K562	blood:
27	chr3:52547472..52549650-chr3:52551017..52554363,3	K562	blood:
28	chr3:52493352..52494943-chr3:52546751..52548453,2	K562	blood:
29	chr3:52541961..52543770-chr3:52548996..52551391,2	K562	blood:
30	chr3:52488122..52489688-chr3:52535333..52537120,2	K562	blood:
31	chr3:52544282..52545847-chr3:52552350..52554640,2	K562	blood:
32	chr3:52529207..52530741-chr3:52535471..52537071,2	K562	blood:
33	chr3:52539497..52541037-chr3:52553814..52556240,2	MCF-7	breast:
34	chr3:52541961..52543770-chr3:52548996..52551391,2	K562	blood:
35	chr3:52539372..52542636-chr3:52569567..52572921,4	MCF-7	breast:
36	chr3:52552118..52554542-chr3:52561235..52564270,3	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NT5DC2-2	chr3:52539055-52539424	expReg_chr3_4559_-

No data

Variant related genes	Relation type
STAB1	TF binding region
STAB1	CpG island
ENSG00000010327	chromatin interactions
ENSG00000168268	chromatin interactions
ENSG00000010322	chromatin interactions
ENSG00000222345	chromatin interactions
ENSG00000163938	chromatin interactions
ENSG00000212452	chromatin interactions
ENSG00000168273	chromatin interactions

Extended variants
information (count: 1262 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:1262 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs758801	chr3:52536308-52536309	Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs188237666	chr3:52536317-52536318	Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs531848612	chr3:52536434-52536435	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs77652244	chr3:52536472-52536473	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs111355725	chr3:52536474-52536475	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs563695089	chr3:52536480-52536481	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs731831	chr3:52536514-52536515	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs564413561	chr3:52536518-52536519	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs146578246	chr3:52536531-52536532	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs372132225	chr3:52536577-52536578	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs372955057	chr3:52536611-52536612	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs377316251	chr3:52536617-52536618	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs140965743	chr3:52536664-52536665	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs201122593	chr3:52536665-52536666	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs200400313	chr3:52536686-52536687	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs529063889	chr3:52536687-52536688	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs201713438	chr3:52536743-52536744	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs375440295	chr3:52536752-52536753	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs368648753	chr3:52536770-52536771	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs370025535	chr3:52536781-52536782	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs150151643	chr3:52536805-52536806	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs538110525	chr3:52536845-52536846	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs543692942	chr3:52536916-52536917	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs571659523	chr3:52536969-52536970	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs193066312	chr3:52536988-52536989	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
26	rs138643169	chr3:52537010-52537011	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs370490159	chr3:52537011-52537012	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs374484700	chr3:52537023-52537024	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs536764266	chr3:52537044-52537045	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs375963401	chr3:52537064-52537065	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs529062376	chr3:52537065-52537066	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
32	rs201772552	chr3:52537083-52537084	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs369425895	chr3:52537085-52537086	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs140603553	chr3:52537086-52537087	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs140814435	chr3:52537095-52537096	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs112337417	chr3:52537109-52537110	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs141468598	chr3:52537122-52537123	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs370002856	chr3:52537123-52537124	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs183584145	chr3:52537165-52537166	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs148910759	chr3:52537170-52537171	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs560178202	chr3:52537240-52537241	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs143438936	chr3:52537249-52537250	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs549121548	chr3:52537257-52537258	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs147972666	chr3:52537280-52537281	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs531576954	chr3:52537281-52537282	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs551697394	chr3:52537305-52537306	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs571593194	chr3:52537306-52537307	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs368589298	chr3:52537313-52537314	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs200533407	chr3:52537357-52537358	Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs184669399	chr3:52537408-52537409	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:93)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	21785460	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Bladder cancer	21909424	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Septo-optic dysplasia	21572526	CNVD
Biliary cancer	19435499	CNVD
Squamous cell cancer	20885788	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
Ventriculomegaly	21325761	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Lung cancer	16618734	CNVD
Neuroblastoma	19686582	CNVD
Renal cell carcinoma	18765545	CNVD
Adrenocortical carcinoma	18281524	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:533 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52513400-52541400	Weak transcription	A549	lung
2	chr3:52527000-52538000	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr3:52527000-52540200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr3:52529200-52537400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr3:52530000-52537600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
6	chr3:52530000-52538800	Weak transcription	Gastric	stomach
7	chr3:52530200-52537600	Weak transcription	Pancreas	Pancrea
8	chr3:52530200-52551800	Weak transcription	Esophagus	oesophagus
9	chr3:52530400-52552400	Weak transcription	Brain Substantia Nigra	brain
10	chr3:52530600-52558000	Weak transcription	Colon Smooth Muscle	Colon
11	chr3:52530800-52537600	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr3:52530800-52548200	Weak transcription	Right Ventricle	heart
13	chr3:52530800-52551600	Weak transcription	Fetal Intestine Small	intestine
14	chr3:52531000-52547600	Weak transcription	Duodenum Mucosa	Duodenum
15	chr3:52532400-52536800	Genic enhancers	Spleen	Spleen
16	chr3:52533400-52540800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr3:52533400-52549200	Weak transcription	Fetal Muscle Leg	muscle
18	chr3:52533400-52549200	Weak transcription	Skeletal Muscle Male	skeletal muscle
19	chr3:52533400-52558200	Weak transcription	Skeletal Muscle Female	skeletal muscle
20	chr3:52533400-52559800	Weak transcription	Liver	Liver
21	chr3:52533600-52537800	Weak transcription	Colonic Mucosa	Colon
22	chr3:52533600-52566000	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr3:52534600-52536600	Genic enhancers	Primary hematopoietic stem cells short term culture	blood
24	chr3:52535200-52538600	Weak transcription	Placenta	Placenta
25	chr3:52535400-52536400	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr3:52535400-52536800	Weak transcription	Adipose Nuclei	Adipose
27	chr3:52535400-52538800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr3:52535400-52539800	Strong transcription	HUVEC	blood vessel
29	chr3:52535400-52562200	Strong transcription	Monocytes-CD14+_RO01746	blood
30	chr3:52535600-52541600	Strong transcription	Lung	lung
31	chr3:52535600-52562600	Strong transcription	Primary monocytes fromperipheralblood	blood
32	chr3:52536000-52537400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr3:52536200-52536800	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr3:52536200-52536800	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr3:52536400-52537000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr3:52536400-52538600	Enhancers	Fetal Muscle Trunk	muscle
37	chr3:52536600-52536800	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin01	Skin
38	chr3:52536600-52564000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
39	chr3:52536800-52537000	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
40	chr3:52536800-52537600	Strong transcription	Spleen	Spleen
41	chr3:52536800-52539000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr3:52536800-52542000	Weak transcription	Fetal Stomach	stomach
43	chr3:52536800-52552600	Strong transcription	Adipose Nuclei	Adipose
44	chr3:52537000-52537400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr3:52537000-52539000	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
46	chr3:52537400-52537600	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin02	Skin
47	chr3:52537400-52539600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
48	chr3:52537400-52541000	ZNF genes & repeats	Fetal Adrenal Gland	Adrenal Gland
49	chr3:52537600-52537800	Genic enhancers	Spleen	Spleen
50	chr3:52537600-52538800	Enhancers	Pancreas	Pancrea

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