Variant report

Variant	nsv590308
Chromosome Location	chr3:52854335-52860806
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:231)
CpG islands
(count:61)
Chromatin interactive
region (count:9)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:231 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr3:52854823-52855129	K562	blood:	n/a	n/a
2	BHLHE40	chr3:52854812-52855172	HepG2	liver:	n/a	n/a
3	BRCA1	chr3:52854959-52855112	H1-hESC	embryonic stem cell:	n/a	n/a
4	BRCA1	chr3:52854856-52854990	GM12878	blood:	n/a	n/a
5	CEBPB	chr3:52858224-52858408	IMR90	lung:	n/a	chr3:52858308-52858319
6	CEBPB	chr3:52858268-52858360	K562	blood:	n/a	chr3:52858308-52858319
7	CEBPB	chr3:52858169-52858472	HepG2	liver:	n/a	chr3:52858308-52858319
8	CEBPB	chr3:52854911-52854998	H1-hESC	embryonic stem cell:	n/a	n/a
9	CHD2	chr3:52854957-52855001	H1-hESC	embryonic stem cell:	n/a	n/a
10	CTCF	chr3:52854900-52855050	AG09319	gingival:	n/a	n/a
11	CTCF	chr3:52854920-52855070	HCPEpiC	choroid plexus:	n/a	n/a
12	CTCF	chr3:52854480-52855269	SK-N-SH	brain:	n/a	n/a
13	CTCF	chr3:52854900-52855050	HAc	cerebellar:	n/a	n/a
14	CTCF	chr3:52854520-52854670	WI-38	lung:	n/a	n/a
15	CTCF	chr3:52854880-52855030	HA-sp	spinal cord:	n/a	n/a
16	CTCF	chr3:52854900-52855050	MCF-7	breast:	n/a	n/a
17	CTCF	chr3:52854920-52855070	HMF	breast:	n/a	n/a
18	CTCF	chr3:52854811-52855141	GM19238	blood:	n/a	n/a
19	CTCF	chr3:52854480-52854630	HRPEpiC	eye:	n/a	n/a
20	CTCF	chr3:52854880-52855030	GM12878	blood:	n/a	n/a
21	CTCF	chr3:52854500-52854650	A549	lung:	n/a	n/a
22	CTCF	chr3:52854560-52854710	NHLF	lung:	n/a	n/a
23	CTCF	chr3:52854900-52855050	HCPEpiC	choroid plexus:	n/a	n/a
24	CTCF	chr3:52854880-52855030	AoAF	blood vessel:	n/a	n/a
25	CTCF	chr3:52854900-52855050	HL-60	blood:	n/a	n/a
26	CTCF	chr3:52854900-52855050	GM12873	blood:	n/a	n/a
27	CTCF	chr3:52854900-52855050	SK-N-SH_RA	brain:	n/a	n/a
28	CTCF	chr3:52854640-52854790	AG04449	skin:	n/a	n/a
29	CTCF	chr3:52854912-52855067	GM13976	blood:	n/a	n/a
30	CTCF	chr3:52854900-52855050	GM06990	blood:	n/a	n/a
31	CTCF	chr3:52854870-52855103	GM10266	blood:	n/a	n/a
32	CTCF	chr3:52854889-52855087	GM10248	blood:	n/a	n/a
33	CTCF	chr3:52854860-52855010	WI-38	lung:	n/a	n/a
34	CTCF	chr3:52854920-52855070	BJ	skin:	n/a	n/a
35	CTCF	chr3:52854920-52855070	NHDF-neo	bronchial:	n/a	n/a
36	CTCF	chr3:52854841-52855103	HepG2	liver:	n/a	n/a
37	CTCF	chr3:52854810-52855128	GM19240	blood:	n/a	n/a
38	CTCF	chr3:52854880-52855030	HCM	heart:	n/a	n/a
39	CTCF	chr3:52855260-52855410	GM12866	blood:	n/a	n/a
40	CTCF	chr3:52854691-52854750	GM19240	blood:	n/a	n/a
41	CTCF	chr3:52854671-52854751	HUVEC	blood vessel:	n/a	n/a
42	CTCF	chr3:52854853-52855091	Medullo	brain:	n/a	n/a
43	CTCF	chr3:52854872-52855095	Spleen_OC	spleen:	n/a	n/a
44	CTCF	chr3:52854907-52855079	Pancreas_OC	pancreas:	n/a	n/a
45	CTCF	chr3:52854920-52855070	GM12872	blood:	n/a	n/a
46	CTCF	chr3:52854920-52855070	GM12867	blood:	n/a	n/a
47	CTCF	chr3:52854638-52854684	GM19240	blood:	n/a	n/a
48	CTCF	chr3:52854880-52855030	GM12866	blood:	n/a	n/a
49	CTCF	chr3:52854613-52855145	GM12891	blood:	n/a	n/a
50	CTCF	chr3:52854880-52855030	HMEC	breast:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:52854843-52854893	SK-N-MC	brain:	n/a
2	chr3:52854843-52854893	Caco-2	colon:	n/a
3	chr3:52854843-52854893	SK-N-SH_RA	brain:	n/a
4	chr3:52854843-52854893	ovcar-3	ovarian:	n/a
5	chr3:52854843-52854893	HNPCEpiC	eye:	n/a
6	chr3:52854843-52854893	MCF-7	breast:	n/a
7	chr3:52854843-52854893	HL-60	blood:	n/a
8	chr3:52854843-52854893	AG04449	skin:	fetal
9	chr3:52854843-52854893	HRPEpiC	eye:	n/a
10	chr3:52854843-52854893	HepG2	liver:	n/a
11	chr3:52854843-52854893	GM12891	blood:	n/a
12	chr3:52854843-52854893	LNCaP	prostate:	n/a
13	chr3:52854843-52854893	NT2-D1	testis:	n/a
14	chr3:52854843-52854893	AG04450	lung:	fetal
15	chr3:52854843-52854893	BE2_C	brain:	n/a
16	chr3:52854843-52854893	BJ	skin:	n/a
17	chr3:52854843-52854893	SKMC	muscle:	n/a
18	chr3:52854843-52854893	HIPEpiC	eye:	n/a
19	chr3:52854843-52854893	HRE	kidney:	n/a
20	chr3:52854843-52854893	HRCEpiC	kidney:	n/a
21	chr3:52854843-52854893	AG09309	skin:	n/a
22	chr3:52854843-52854893	AG09319	gingival:	n/a
23	chr3:52854843-52854893	AG10803	skin:	n/a
24	chr3:52854843-52854893	Hepatocyte	liver:	n/a
25	chr3:52854843-52854893	ECC-1	luminal epithelium:	n/a
26	chr3:52854843-52854893	IMR90	lung:	fetal
27	chr3:52854843-52854893	Hela-S3	cervix:	n/a
28	chr3:52854843-52854893	GM12892	blood:	n/a
29	chr3:52854843-52854893	GM12878	blood:	n/a
30	chr3:52854843-52854893	Jurkat	blood:	n/a
31	chr3:52854843-52854893	HAEpiC	amniotic membrane:	n/a
32	chr3:52854843-52854893	ProgFib	skin:	n/a
33	chr3:52854843-52854893	SAEC	small airway:	n/a
34	chr3:52854843-52854893	NH-A	brain:	n/a
35	chr3:52854843-52854893	HEEpiC	esophagus:	n/a
36	chr3:52854843-52854893	PFSK-1	brain:	n/a
37	chr3:52854843-52854893	AoSMC	blood vessel:	n/a
38	chr3:52854843-52854893	GM06990	blood:	n/a
39	chr3:52854843-52854893	HCT-116	colon:	n/a
40	chr3:52854843-52854893	A549	lung:	n/a
41	chr3:52854843-52854893	HCF	heart:	n/a
42	chr3:52854843-52854893	NHDF-neo	bronchial:	n/a
43	chr3:52854843-52854893	T-47D	breast:	n/a
44	chr3:52854843-52854893	HEK293	kidney:	embryo
45	chr3:52854843-52854893	GM19239	blood:	n/a
46	chr3:52854843-52854893	PrEC	prostate:	n/a
47	chr3:52854843-52854893	HUVEC	blood vessel:	n/a
48	chr3:52854843-52854893	CMK	blood:	n/a
49	chr3:52854843-52854893	RPTEC	kidney:	n/a
50	chr3:52854843-52854893	H1-hESC	embryonic stem cell:	embryo

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:52857160..52859270-chr3:52860269..52862799,2	K562	blood:
2	chr3:52859743..52862109-chr3:52863233..52865763,2	K562	blood:
3	chr3:52847640..52851112-chr3:52852588..52855076,3	MCF-7	breast:
4	chr3:52462640..52463186-chr3:52854147..52854995,2	K562	blood:
5	chr3:52834279..52837211-chr3:52858122..52860407,2	K562	blood:
6	chr3:52860455..52862109-chr3:52862343..52864733,2	K562	blood:
7	chr3:52836954..52839305-chr3:52853241..52854782,2	K562	blood:
8	chr3:52857160..52859270-chr3:52860269..52862799,2	K562	blood:
9	chr3:52804845..52806455-chr3:52854968..52857676,2	MCF-7	breast:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ITIH3-1	chr3:52858128-52858353	ENSG00000239799.1
2	lnc-ITIH3-1	chr3:52859221-52859330	ENSG00000239799.1
3	lnc-TMEM110-MUSTN1-3	chr3:52855095-52855146	NONHSAT089965
4	lnc-TMEM110-MUSTN1-3	chr3:52856282-52856355	NONHSAT089965
5	lnc-TMEM110-MUSTN1-3	chr3:52857351-52857722	NONHSAT089965
6	lnc-ITIH3-1	chr3:52857951-52858009	ENSG00000239799.1

No data

Variant related genes	Relation type
ITIH4-AS1	TF binding region
ITIH4	TF binding region
ITIH4-AS1	CpG island
ITIH4	CpG island
ENSG00000114904	chromatin interactions
ENSG00000239799	chromatin interactions
ENSG00000162267	chromatin interactions
ENSG00000055955	chromatin interactions

Extended variants
information (count: 338 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:338 , 50 per page) page: 1 2 3 4 5 6 7

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs111858460	chr3:52854335-52854336	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs535747696	chr3:52854336-52854337	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs375840840	chr3:52854346-52854347	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs77349648	chr3:52854358-52854359	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs574517662	chr3:52854365-52854366	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs201386337	chr3:52854376-52854377	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs371184979	chr3:52854382-52854383	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs557136727	chr3:52854418-52854419	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs377629182	chr3:52854471-52854472	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs1052728	chr3:52854472-52854473	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs145741581	chr3:52854490-52854491	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs548047382	chr3:52854493-52854494	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs528407257	chr3:52854525-52854526	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs2535615	chr3:52854535-52854536	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs561640044	chr3:52854551-52854552	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs530861334	chr3:52854584-52854585	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs538030927	chr3:52854593-52854594	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs570623670	chr3:52854609-52854610	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs370527061	chr3:52854614-52854615	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs111532900	chr3:52854622-52854623	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs145664123	chr3:52854635-52854636	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs200903345	chr3:52854643-52854644	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs112339252	chr3:52854646-52854647	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs374743160	chr3:52854662-52854663	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs547195354	chr3:52854692-52854693	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs143707017	chr3:52854693-52854694	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs566983509	chr3:52854742-52854743	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs536029248	chr3:52854755-52854756	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs369133267	chr3:52854757-52854758	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs1130869	chr3:52854786-52854787	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs556134855	chr3:52854789-52854790	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs569565296	chr3:52854794-52854795	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs199684635	chr3:52854813-52854814	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs556955366	chr3:52854859-52854860	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs78375229	chr3:52854900-52854901	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs556446616	chr3:52854901-52854902	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs2535646	chr3:52854913-52854914	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs555872419	chr3:52854923-52854924	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs553010137	chr3:52854926-52854927	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs535420071	chr3:52854943-52854944	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs112810398	chr3:52854951-52854952	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs377224640	chr3:52854965-52854966	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs201526222	chr3:52854967-52854968	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs200745734	chr3:52854971-52854972	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs34030269	chr3:52854974-52854975	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs369594100	chr3:52854991-52854992	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs148956512	chr3:52855000-52855001	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs376871387	chr3:52855073-52855074	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs140353320	chr3:52855076-52855077	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
50	rs564113005	chr3:52855120-52855121	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	21785460	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Septo-optic dysplasia	21572526	CNVD
Biliary cancer	19435499	CNVD
Squamous cell cancer	20885788	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
Ventriculomegaly	21325761	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Lung cancer	16618734	CNVD
Neuroblastoma	19686582	CNVD
Renal cell carcinoma	18765545	CNVD
Adrenocortical carcinoma	18281524	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:164 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52844200-52856600	Weak transcription	Primary T cells from cord blood	blood
2	chr3:52844400-52857200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr3:52844600-52856800	Weak transcription	Fetal Intestine Small	intestine
4	chr3:52844600-52857600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr3:52846400-52860800	Weak transcription	Esophagus	oesophagus
6	chr3:52846800-52857000	Weak transcription	Aorta	Aorta
7	chr3:52847000-52857400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr3:52847200-52861200	Genic enhancers	Liver	Liver
9	chr3:52847400-52857000	Weak transcription	Brain Hippocampus Middle	brain
10	chr3:52847600-52865000	Weak transcription	Psoas Muscle	Psoas
11	chr3:52847800-52854600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr3:52848400-52865800	Weak transcription	Ovary	ovary
13	chr3:52850200-52868400	Weak transcription	Colonic Mucosa	Colon
14	chr3:52850600-52857800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
15	chr3:52850600-52864200	Strong transcription	Stomach Smooth Muscle	stomach
16	chr3:52850800-52865400	Strong transcription	Fetal Stomach	stomach
17	chr3:52851000-52856800	Weak transcription	Fetal Brain Female	brain
18	chr3:52851200-52855400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr3:52851600-52863400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
20	chr3:52851800-52855200	Strong transcription	Brain Anterior Caudate	brain
21	chr3:52851800-52856800	Weak transcription	Lung	lung
22	chr3:52851800-52858000	Weak transcription	Placenta	Placenta
23	chr3:52852200-52869200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
24	chr3:52852400-52854400	Enhancers	ES-I3 Cell Line	embryonic stem cell
25	chr3:52852800-52854800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr3:52852800-52869200	Weak transcription	Primary B cells from cord blood	blood
27	chr3:52853000-52854400	Enhancers	H1 Cell Line	embryonic stem cell
28	chr3:52853000-52854400	Strong transcription	Brain Germinal Matrix	brain
29	chr3:52853000-52857000	Weak transcription	Gastric	stomach
30	chr3:52853000-52857000	Enhancers	HepG2	liver
31	chr3:52853000-52857000	Weak transcription	Monocytes-CD14+_RO01746	blood
32	chr3:52853000-52858400	Strong transcription	Brain Angular Gyrus	brain
33	chr3:52853000-52868000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
34	chr3:52853200-52855600	Genic enhancers	Skeletal Muscle Male	skeletal muscle
35	chr3:52853200-52859400	Strong transcription	Thymus	Thymus
36	chr3:52853400-52854400	Strong transcription	Brain Inferior Temporal Lobe	brain
37	chr3:52853400-52856600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr3:52853400-52857600	Strong transcription	Spleen	Spleen
39	chr3:52853400-52861200	Strong transcription	Fetal Muscle Leg	muscle
40	chr3:52853600-52854400	Enhancers	HUES64 Cell Line	embryonic stem cell
41	chr3:52853600-52854400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
42	chr3:52853600-52854800	Enhancers	HUES6 Cell Line	embryonic stem cell
43	chr3:52853600-52855200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr3:52853600-52855600	Enhancers	Fetal Muscle Trunk	muscle
45	chr3:52853800-52855000	Genic enhancers	Skeletal Muscle Female	skeletal muscle
46	chr3:52853800-52855800	Strong transcription	Right Ventricle	heart
47	chr3:52854000-52854400	Enhancers	HUES48 Cell Line	embryonic stem cell
48	chr3:52854000-52854400	Weak transcription	Primary T helper cells fromperipheralblood	blood
49	chr3:52854000-52854800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr3:52854000-52856600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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