Variant report

Variant nsv590902
Chromosome Location chr3:85200742-85302473
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:85197400-85209600 Weak transcription Stomach Mucosa stomach
2 chr3:85199400-85201400 Weak transcription H1 Cell Line embryonic stem cell
3 chr3:85199400-85201400 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr3:85199400-85213400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr3:85201400-85201600 ZNF genes & repeats H1 Cell Line embryonic stem cell
6 chr3:85201400-85202600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
7 chr3:85208400-85208600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr3:85208400-85208800 Enhancers HMEC breast
9 chr3:85208400-85209200 Enhancers Fetal Intestine Small intestine
10 chr3:85208600-85208800 Enhancers A549 lung
11 chr3:85208600-85210200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr3:85208800-85210000 Weak transcription HMEC breast
13 chr3:85208800-85210400 Weak transcription A549 lung
14 chr3:85209200-85210400 Weak transcription Fetal Intestine Small intestine
15 chr3:85209600-85209800 Enhancers Stomach Mucosa stomach
16 chr3:85209800-85210200 Weak transcription Stomach Mucosa stomach
17 chr3:85210000-85213800 Enhancers HMEC breast
18 chr3:85210000-85214000 Enhancers NHEK skin
19 chr3:85210200-85211200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr3:85210200-85211400 Enhancers Stomach Mucosa stomach
21 chr3:85210400-85210600 Flanking Active TSS A549 lung
22 chr3:85210400-85210800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr3:85210400-85211200 Enhancers Fetal Intestine Small intestine
24 chr3:85210400-85211600 Enhancers Hela-S3 cervix
25 chr3:85210400-85214000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr3:85210600-85211000 Active TSS A549 lung
27 chr3:85210800-85211200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr3:85211000-85211400 Flanking Active TSS A549 lung
29 chr3:85211200-85211400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr3:85211200-85212600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr3:85211400-85212600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr3:85212600-85213600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr3:85212600-85214400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr3:85213200-85214200 Enhancers Cortex derived primary cultured neurospheres brain
35 chr3:85213400-85213800 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr3:85213400-85213800 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr3:85213400-85213800 Enhancers Brain Cingulate Gyrus brain
38 chr3:85213400-85214000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr3:85213400-85214000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr3:85213400-85214000 Enhancers HUES48 Cell Line embryonic stem cell
41 chr3:85213400-85214000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
42 chr3:85214000-85220600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr3:85214200-85225600 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr3:85214400-85219600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr3:85219000-85220200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr3:85219600-85220000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr3:85219600-85220000 Enhancers HMEC breast
48 chr3:85219600-85220200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr3:85220000-85220800 Enhancers A549 lung
50 chr3:85220800-85222000 Enhancers Skeletal Muscle Male skeletal muscle

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