Variant report

Variant nsv590952
Chromosome Location chr3:89493167-89727198
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:295 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:89460800-89521200 Weak transcription Stomach Smooth Muscle stomach
2 chr3:89493000-89498400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr3:89494200-89494400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:89494400-89499400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr3:89498400-89501000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr3:89498800-89506400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr3:89499400-89499600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr3:89500600-89500800 Enhancers Fetal Brain Female brain
9 chr3:89500800-89501600 Enhancers Fetal Brain Male brain
10 chr3:89500800-89532400 Weak transcription Fetal Brain Female brain
11 chr3:89501000-89503000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr3:89501400-89521600 Weak transcription Brain Germinal Matrix brain
13 chr3:89503000-89504000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr3:89504000-89519800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr3:89504200-89505000 Enhancers Fetal Lung lung
16 chr3:89506400-89506600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
17 chr3:89506600-89506800 ZNF genes & repeats Fetal Stomach stomach
18 chr3:89506600-89527800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr3:89506800-89508800 Weak transcription Fetal Stomach stomach
20 chr3:89508800-89509000 ZNF genes & repeats Fetal Stomach stomach
21 chr3:89509000-89517000 Weak transcription Fetal Stomach stomach
22 chr3:89515800-89516200 Active TSS ES-I3 Cell Line embryonic stem cell
23 chr3:89515800-89516200 Active TSS iPS-15b Cell Line embryonic stem cell
24 chr3:89515800-89516200 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr3:89516200-89516600 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr3:89516200-89516800 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr3:89516600-89517200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr3:89516600-89517600 Enhancers iPS-18 Cell Line embryonic stem cell
29 chr3:89516800-89517200 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr3:89516800-89517400 Enhancers HUES64 Cell Line embryonic stem cell
31 chr3:89516800-89517400 Enhancers iPS-20b Cell Line embryonic stem cell
32 chr3:89516800-89517600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr3:89517000-89517200 Enhancers Fetal Muscle Leg muscle
34 chr3:89517000-89517400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr3:89517000-89517400 Enhancers Fetal Stomach stomach
36 chr3:89517200-89527600 Weak transcription Fetal Muscle Leg muscle
37 chr3:89517400-89523400 Weak transcription Fetal Stomach stomach
38 chr3:89519800-89520200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr3:89520200-89521400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr3:89521200-89521800 Strong transcription Stomach Smooth Muscle stomach
41 chr3:89521400-89523000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr3:89521600-89523000 Strong transcription Brain Germinal Matrix brain
43 chr3:89521800-89528000 Weak transcription Stomach Smooth Muscle stomach
44 chr3:89523000-89523800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr3:89523000-89530000 Weak transcription Brain Germinal Matrix brain
46 chr3:89523800-89525000 Enhancers Fetal Lung lung
47 chr3:89523800-89525200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr3:89523800-89525200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
49 chr3:89525200-89526200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr3:89526200-89526600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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