Variant report

Variant	nsv591301
Chromosome Location	chr3:112252532-112332629
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:112280653-112281584	HepG2	liver:	n/a	n/a
2	ATF1	chr3:112280650-112281430	K562	blood:	n/a	n/a
3	ATF1	chr3:112328988-112329362	K562	blood:	n/a	n/a
4	ATF1	chr3:112279861-112280264	K562	blood:	n/a	n/a
5	ATF2	chr3:112280282-112281599	GM12878	blood:	n/a	n/a
6	ATF2	chr3:112280603-112281289	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr3:112258649-112259179	GM12878	blood:	n/a	n/a
8	ATF2	chr3:112280589-112281458	GM12878	blood:	n/a	n/a
9	ATF2	chr3:112320958-112321418	GM12878	blood:	n/a	n/a
10	ATF2	chr3:112320923-112321541	GM12878	blood:	n/a	n/a
11	ATF2	chr3:112281901-112282337	GM12878	blood:	n/a	n/a
12	ATF2	chr3:112281815-112282342	GM12878	blood:	n/a	n/a
13	ATF2	chr3:112258495-112259308	GM12878	blood:	n/a	n/a
14	ATF3	chr3:112279981-112280136	GM12878	blood:	n/a	n/a
15	ATF3	chr3:112280668-112280994	K562	blood:	n/a	chr3:112280797-112280806 chr3:112280786-112280806
16	ATF3	chr3:112280572-112281115	HepG2	liver:	n/a	chr3:112280797-112280806 chr3:112280786-112280806
17	ATF3	chr3:112280475-112281190	A549	lung:	n/a	chr3:112280797-112280806 chr3:112280786-112280806
18	ATF3	chr3:112280600-112280890	GM12878	blood:	n/a	chr3:112280797-112280806 chr3:112280786-112280806
19	ATF3	chr3:112280563-112281302	A549	lung:	n/a	chr3:112280797-112280806 chr3:112280786-112280806
20	ATF3	chr3:112280541-112280957	K562	blood:	n/a	chr3:112280797-112280806 chr3:112280786-112280806
21	ATF3	chr3:112280500-112281132	H1-hESC	embryonic stem cell:	n/a	chr3:112280797-112280806 chr3:112280786-112280806
22	ATF3	chr3:112279938-112280177	K562	blood:	n/a	n/a
23	ATF3	chr3:112280533-112281188	GM12878	blood:	n/a	chr3:112280797-112280806 chr3:112280786-112280806
24	ATF3	chr3:112280561-112281027	K562	blood:	n/a	chr3:112280797-112280806 chr3:112280786-112280806
25	ATF3	chr3:112280604-112281011	H1-hESC	embryonic stem cell:	n/a	chr3:112280797-112280806 chr3:112280786-112280806
26	ATF3	chr3:112280617-112281016	HepG2	liver:	n/a	chr3:112280797-112280806 chr3:112280786-112280806
27	BACH1	chr3:112280713-112281321	H1-hESC	embryonic stem cell:	n/a	n/a
28	BATF	chr3:112281914-112282258	GM12878	blood:	n/a	n/a
29	BATF	chr3:112281954-112282169	GM12878	blood:	n/a	n/a
30	BATF	chr3:112321009-112321476	GM12878	blood:	n/a	n/a
31	BATF	chr3:112258695-112259018	GM12878	blood:	n/a	n/a
32	BATF	chr3:112321042-112321412	GM12878	blood:	n/a	n/a
33	BCL11A	chr3:112321011-112321408	GM12878	blood:	n/a	n/a
34	BCL3	chr3:112280512-112281339	A549	lung:	n/a	chr3:112280841-112280854
35	BCL3	chr3:112280382-112281278	A549	lung:	n/a	chr3:112280841-112280854
36	BCLAF1	chr3:112279687-112281617	GM12878	blood:	n/a	chr3:112280274-112280282 chr3:112280841-112280854
37	BCLAF1	chr3:112320932-112321390	GM12878	blood:	n/a	n/a
38	BCLAF1	chr3:112280388-112281623	GM12878	blood:	n/a	chr3:112280841-112280854
39	BHLHE40	chr3:112279838-112281526	GM12878	blood:	n/a	chr3:112280795-112280808 chr3:112280819-112280828 chr3:112280797-112280806 chr3:112280798-112280807 chr3:112280820-112280829 chr3:112280821-112280830 chr3:112280820-112280829 chr3:112280818-112280831 chr3:112280797-112280806
40	BHLHE40	chr3:112280697-112281032	HepG2	liver:	n/a	chr3:112280795-112280808 chr3:112280819-112280828 chr3:112280797-112280806 chr3:112280798-112280807 chr3:112280820-112280829 chr3:112280821-112280830 chr3:112280820-112280829 chr3:112280818-112280831 chr3:112280797-112280806
41	BHLHE40	chr3:112280624-112281066	HepG2	liver:	n/a	chr3:112280795-112280808 chr3:112280819-112280828 chr3:112280797-112280806 chr3:112280798-112280807 chr3:112280820-112280829 chr3:112280821-112280830 chr3:112280820-112280829 chr3:112280818-112280831 chr3:112280797-112280806
42	BHLHE40	chr3:112279913-112281470	K562	blood:	n/a	chr3:112280795-112280808 chr3:112280819-112280828 chr3:112280797-112280806 chr3:112280798-112280807 chr3:112280820-112280829 chr3:112280821-112280830 chr3:112280820-112280829 chr3:112280818-112280831 chr3:112280797-112280806
43	BHLHE40	chr3:112280613-112281367	A549	lung:	n/a	chr3:112280795-112280808 chr3:112280819-112280828 chr3:112280797-112280806 chr3:112280798-112280807 chr3:112280820-112280829 chr3:112280821-112280830 chr3:112280820-112280829 chr3:112280818-112280831 chr3:112280797-112280806
44	BHLHE40	chr3:112279960-112281465	HepG2	liver:	n/a	chr3:112280795-112280808 chr3:112280819-112280828 chr3:112280797-112280806 chr3:112280798-112280807 chr3:112280820-112280829 chr3:112280821-112280830 chr3:112280820-112280829 chr3:112280818-112280831 chr3:112280797-112280806
45	BRCA1	chr3:112281303-112281528	H1-hESC	embryonic stem cell:	n/a	n/a
46	BRCA1	chr3:112279876-112280311	Hela-S3	cervix:	n/a	n/a
47	BRCA1	chr3:112280619-112281374	HepG2	liver:	n/a	n/a
48	BRCA1	chr3:112280547-112281490	Hela-S3	cervix:	n/a	n/a
49	BRCA1	chr3:112280646-112280922	H1-hESC	embryonic stem cell:	n/a	n/a
50	BRCA1	chr3:112324473-112324550	Hela-S3	cervix:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:112276088-112276138	HCM	heart:	n/a
2	chr3:112282031-112282081	HepG2	liver:	n/a
3	chr3:112324301-112324351	HCF	heart:	n/a
4	chr3:112280678-112280728	LNCaP	prostate:	n/a
5	chr3:112324301-112324351	Caco-2	colon:	n/a
6	chr3:112280241-112280291	MCF-7	breast:	n/a
7	chr3:112280241-112280291	PFSK-1	brain:	n/a
8	chr3:112280577-112280627	NHBE	bronchial:	n/a
9	chr3:112280241-112280291	HCT-116	colon:	n/a
10	chr3:112281021-112281071	AG10803	skin:	n/a
11	chr3:112281021-112281071	Hela-S3	cervix:	n/a
12	chr3:112281021-112281071	HCT-116	colon:	n/a
13	chr3:112323619-112323669	U87	brain:	n/a
14	chr3:112278508-112278558	SKMC	muscle:	n/a
15	chr3:112323619-112323669	SKMC	muscle:	n/a
16	chr3:112278508-112278558	CMK	blood:	n/a
17	chr3:112302060-112302110	CMK	blood:	n/a
18	chr3:112281021-112281071	AG04450	lung:	fetal
19	chr3:112280577-112280627	PFSK-1	brain:	n/a
20	chr3:112297295-112297345	SKMC	muscle:	n/a
21	chr3:112280241-112280291	AG04450	lung:	fetal
22	chr3:112280678-112280728	HCF	heart:	n/a
23	chr3:112297295-112297345	HCPEpiC	choroid plexus:	n/a
24	chr3:112302060-112302110	HNPCEpiC	eye:	n/a
25	chr3:112302060-112302110	HCM	heart:	n/a
26	chr3:112280577-112280627	AoSMC	blood vessel:	n/a
27	chr3:112323619-112323669	HCT-116	colon:	n/a
28	chr3:112280678-112280728	BE2_C	brain:	n/a
29	chr3:112280577-112280627	HMEC	breast:	n/a
30	chr3:112282684-112282734	ProgFib	skin:	n/a
31	chr3:112282031-112282081	SKMC	muscle:	n/a
32	chr3:112280678-112280728	ovcar-3	ovarian:	n/a
33	chr3:112280577-112280627	IMR90	lung:	fetal
34	chr3:112280678-112280728	NHDF-neo	bronchial:	n/a
35	chr3:112280577-112280627	K562	blood:	n/a
36	chr3:112280577-112280627	AG10803	skin:	n/a
37	chr3:112280577-112280627	HPAEpiC	pulmonary alveolar:	n/a
38	chr3:112276088-112276138	SK-N-SH_RA	brain:	n/a
39	chr3:112282684-112282734	U87	brain:	n/a
40	chr3:112324301-112324351	ECC-1	luminal epithelium:	n/a
41	chr3:112324301-112324351	HEEpiC	esophagus:	n/a
42	chr3:112323619-112323669	Hepatocyte	liver:	n/a
43	chr3:112280886-112280936	AoSMC	blood vessel:	n/a
44	chr3:112282031-112282081	GM12892	blood:	n/a
45	chr3:112282684-112282734	AG04450	lung:	fetal
46	chr3:112280886-112280936	HCM	heart:	n/a
47	chr3:112280241-112280291	SK-N-MC	brain:	n/a
48	chr3:112282031-112282081	PANC-1	pancreas:	n/a
49	chr3:112280678-112280728	HCT-116	colon:	n/a
50	chr3:112280384-112280434	H1-hESC	embryonic stem cell:	embryo

No.	Distal block	Cell Line	Cell type
1	chr3:112305089..112306971-chr3:112309621..112312159,2	MCF-7	breast:
2	chr3:112279983..112280509-chr6:53409485..53409986,2	Hela-S3	cervix:
3	chr3:112300978..112301744-chr9:97623395..97624209,2	MCF-7	breast:
4	chr3:112285735..112288489-chr3:112291503..112294225,2	K562	blood:
5	chr3:112259312..112262688-chr3:112264103..112268109,5	MCF-7	breast:
6	chr3:112276984..112278823-chr3:112279239..112281629,2	MCF-7	breast:
7	chr2:88315724..88316240-chr3:112280550..112281547,2	Hela-S3	cervix:
8	chr3:112271839..112274196-chr3:112276069..112278465,2	K562	blood:
9	chr3:112279637..112281423-chr3:113232414..113235211,2	K562	blood:
10	chr3:112281323..112284151-chr3:113775113..113776995,2	K562	blood:
11	chr3:112272044..112274714-chr3:112358450..112360286,2	MCF-7	breast:
12	chr3:112270877..112274678-chr3:112278992..112281610,4	MCF-7	breast:
13	chr3:112280159..112284151-chr3:113775113..113778230,3	K562	blood:
14	chr3:112301968..112302762-chr3:112697616..112698569,2	MCF-7	breast:
15	chr3:112265348..112267048-chr3:112278268..112281074,2	K562	blood:
16	chr3:112257078..112259281-chr3:112279236..112282506,3	MCF-7	breast:
17	chr3:112303825..112307196-chr3:112355847..112358748,3	MCF-7	breast:
18	chr3:112274879..112277454-chr3:112278984..112281643,2	K562	blood:
19	chr3:112285735..112288489-chr3:112291503..112294225,2	K562	blood:
20	chr3:112290282..112294480-chr3:112295112..112298665,4	K562	blood:
21	chr3:112297435..112299930-chr3:112303584..112305354,2	K562	blood:
22	chr3:112270443..112273330-chr3:112277844..112281278,5	MCF-7	breast:
23	chr3:112280777..112282990-chr3:112288928..112291699,3	MCF-7	breast:
24	chr3:112289268..112293035-chr3:112358216..112361029,3	MCF-7	breast:
25	chr3:112279230..112281440-chr3:112358030..112362501,6	K562	blood:
26	chr3:112265548..112268745-chr3:112278905..112281998,3	K562	blood:
27	chr3:112300713..112301557-chr3:112359630..112360182,2	MCF-7	breast:
28	chr3:112262046..112263985-chr3:112278635..112280484,2	K562	blood:
29	chr3:112259312..112262688-chr3:112264103..112268109,5	MCF-7	breast:
30	chr3:112318190..112320203-chr3:112328682..112330809,2	MCF-7	breast:
31	chr3:112030207..112032434-chr3:112262315..112264380,2	K562	blood:
32	chr3:112272255..112274870-chr3:112277581..112280165,3	K562	blood:
33	chr3:112257611..112259171-chr3:112300442..112301943,2	K562	blood:
34	chr3:112290552..112292970-chr3:112296828..112298665,2	K562	blood:
35	chr3:112278908..112280422-chr3:112332975..112334877,2	MCF-7	breast:
36	chr3:112300755..112301715-chr3:112697798..112698770,2	MCF-7	breast:
37	chr3:112310810..112314084-chr3:112358545..112361034,3	MCF-7	breast:
38	chr3:112304467..112306761-chr3:112307873..112309830,2	K562	blood:
39	chr3:112326392..112328017-chr3:112358236..112359844,2	MCF-7	breast:
40	chr14:81790277..81790869-chr3:112280954..112281455,2	Hela-S3	cervix:
41	chr3:112253490..112256363-chr3:112279039..112281187,3	K562	blood:
42	chr3:112290282..112294480-chr3:112295112..112298665,4	K562	blood:
43	chr14:93673049..93673592-chr3:112280646..112281316,2	Hela-S3	cervix:
44	chr3:112255414..112258114-chr3:112258815..112260452,2	MCF-7	breast:
45	chr3:112267834..112269856-chr3:112273355..112275580,2	MCF-7	breast:
46	chr3:112272255..112274870-chr3:112277581..112280165,3	K562	blood:
47	chr3:112278745..112284115-chr3:112357887..112361363,11	MCF-7	breast:
48	chr3:112305089..112306971-chr3:112309621..112312159,2	MCF-7	breast:
49	chr3:112280239..112282206-chr3:112293782..112295982,2	K562	blood:
50	chr3:112300907..112301738-chr3:112453034..112453898,3	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CCDC80-3	chr3:112276985-112277264	NONHSAT091185
2	lnc-CCDC80-2	chr3:112315641-112320816	NR_109779
3	lnc-SLC35A5-1	chr3:112315667-112322287	XLOC_002759
4	lnc-SLC35A5-2	chr3:112273149-112273439	expReg_chr3_7492_+
5	lnc-SLC35A5-1	chr3:112315410-112315463	XLOC_002759
6	lnc-CCDC80-2	chr3:112315641-112320749	ENSG00000272761.1
7	lnc-CCDC80-2	chr3:112315703-112318342	NONHSAT091188
8	lnc-CCDC80-3	chr3:112280304-112280704	NONHSAT091185

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	SLC35A5	hsa-miR-7-5p	chr3:112301960-112301982

Variant related genes	Relation type
SLC35A5	TF binding region
CCDC80	TF binding region
ATG3	TF binding region
ENSG00000272761	TF binding region
SLC35A5	CpG island
CCDC80	CpG island
ATG3	CpG island
ENSG00000272761	CpG island
ENSG00000189159	chromatin interactions
ENSG00000201699	chromatin interactions
ENSG00000121104	chromatin interactions
ENSG00000144848	chromatin interactions
ENSG00000144827	chromatin interactions
ENSG00000240057	chromatin interactions
ENSG00000091986	chromatin interactions
ENSG00000207940	chromatin interactions
ENSG00000170270	chromatin interactions
ENSG00000163611	chromatin interactions
ENSG00000142871	chromatin interactions
ENSG00000012963	chromatin interactions
ENSG00000162065	chromatin interactions
ENSG00000114529	chromatin interactions
ENSG00000163617	chromatin interactions
ENSG00000138459	chromatin interactions
ENSG00000272844	chromatin interactions
ENSG00000001084	chromatin interactions
ENSG00000222724	chromatin interactions
ENSG00000163608	chromatin interactions
ENSG00000131236	chromatin interactions
ENSG00000151576	chromatin interactions
ENSG00000163607	chromatin interactions

Extended variants
information (count: 3132 )
Associated
traits (count: 59 )

Variant overlapped rSNPs/rCNVs (count:3132 , 50 per page) page: 1 2 3 4 5 6 7 ... 63

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3732817	chr3:112252532-112252533	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs187624596	chr3:112252564-112252565	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs117648839	chr3:112252574-112252575	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs547073701	chr3:112252623-112252624	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs567069839	chr3:112252664-112252665	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs189909349	chr3:112252683-112252684	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs75796948	chr3:112252697-112252698	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs569327961	chr3:112252810-112252811	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs182194246	chr3:112252837-112252838	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs376570815	chr3:112252854-112252855	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs186325291	chr3:112252906-112252907	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs578100679	chr3:112252923-112252924	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs72938498	chr3:112252936-112252937	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs559024048	chr3:112252976-112252977	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs554301675	chr3:112252978-112252979	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs79378017	chr3:112253058-112253059	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs570214747	chr3:112253059-112253060	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs397767079	chr3:112253068-112253069	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs370106466	chr3:112253071-112253072	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs78447755	chr3:112253075-112253076	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs190048553	chr3:112253090-112253091	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs146819825	chr3:112253143-112253144	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs543151496	chr3:112253152-112253153	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs545730801	chr3:112253171-112253172	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs201448805	chr3:112253193-112253194	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs575757011	chr3:112253194-112253195	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs558239878	chr3:112253195-112253196	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs397803805	chr3:112253207-112253208	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs201430369	chr3:112253223-112253224	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs576404012	chr3:112253228-112253229	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs544952306	chr3:112253230-112253231	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs565218509	chr3:112253231-112253232	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs200192354	chr3:112253233-112253234	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs138522909	chr3:112253234-112253235	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs527485698	chr3:112253263-112253264	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs142003555	chr3:112253268-112253269	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs182744613	chr3:112253269-112253270	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs529708153	chr3:112253299-112253300	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs372614720	chr3:112253300-112253301	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs549489304	chr3:112253338-112253339	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs569530084	chr3:112253355-112253356	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs185168335	chr3:112253361-112253362	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs551781153	chr3:112253395-112253396	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs189978290	chr3:112253408-112253409	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs199758809	chr3:112253457-112253458	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs13080749	chr3:112253458-112253459	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
47	rs35408102	chr3:112253460-112253461	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs113737096	chr3:112253466-112253467	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs113031672	chr3:112253517-112253518	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs556722094	chr3:112253549-112253550	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:59)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Neurodevelopmental disorder	22521361	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Developmental delay	22180640	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Basal cell lymphoma	21115979	CNVD
Attention deficit hyperactivity disorder	22180640	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	20164919	CNVD

Chromatin state (count:2715 , 50 per page) page: 1 2 3 4 5 6 7 ... 55

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:112227400-112269800	Weak transcription	Small Intestine	intestine
2	chr3:112234200-112272000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr3:112237200-112254200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
4	chr3:112239600-112272200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr3:112241600-112259400	Strong transcription	Monocytes-CD14+_RO01746	blood
6	chr3:112242600-112263800	Strong transcription	Primary neutrophils fromperipheralblood	blood
7	chr3:112243000-112271600	Strong transcription	Primary monocytes fromperipheralblood	blood
8	chr3:112244000-112259800	Weak transcription	Pancreas	Pancrea
9	chr3:112244400-112274200	Weak transcription	Stomach Mucosa	stomach
10	chr3:112244400-112278200	Weak transcription	K562	blood
11	chr3:112244400-112278400	Weak transcription	HSMMtube	muscle
12	chr3:112244600-112256200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr3:112244600-112264800	Weak transcription	NHEK	skin
14	chr3:112245200-112263200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr3:112245200-112273200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
16	chr3:112245400-112262800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr3:112245600-112258000	Strong transcription	Rectal Mucosa Donor 31	rectum
18	chr3:112245600-112258200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr3:112245800-112252600	Weak transcription	Colon Smooth Muscle	Colon
20	chr3:112245800-112257400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr3:112245800-112261400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr3:112245800-112261800	Strong transcription	Dnd41	blood
23	chr3:112245800-112279600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr3:112246200-112264600	Weak transcription	Fetal Heart	heart
25	chr3:112247000-112253200	Strong transcription	Primary T helper memory cells from peripheral blood 2	blood
26	chr3:112247000-112267800	Strong transcription	Rectal Mucosa Donor 29	rectum
27	chr3:112247200-112261000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr3:112247600-112279600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr3:112247800-112265800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
30	chr3:112248000-112264800	Weak transcription	Ovary	ovary
31	chr3:112248200-112264200	Weak transcription	Fetal Brain Female	brain
32	chr3:112248200-112264800	Weak transcription	HepG2	liver
33	chr3:112248400-112253600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
34	chr3:112248400-112259600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
35	chr3:112248400-112265600	Weak transcription	Brain Germinal Matrix	brain
36	chr3:112248400-112266200	Weak transcription	Brain Anterior Caudate	brain
37	chr3:112248400-112274200	Weak transcription	Brain Cingulate Gyrus	brain
38	chr3:112248800-112265000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr3:112249000-112257200	Weak transcription	Primary T cells from cord blood	blood
40	chr3:112249000-112257200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr3:112249000-112263600	Weak transcription	Cortex derived primary cultured neurospheres	brain
42	chr3:112249000-112264800	Weak transcription	Brain Inferior Temporal Lobe	brain
43	chr3:112249000-112265400	Weak transcription	Right Ventricle	heart
44	chr3:112249200-112254800	Weak transcription	Fetal Muscle Leg	muscle
45	chr3:112249200-112257200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr3:112249200-112265000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr3:112249200-112265800	Weak transcription	H1 Cell Line	embryonic stem cell
48	chr3:112249200-112269800	Weak transcription	Psoas Muscle	Psoas
49	chr3:112249200-112275800	Weak transcription	Fetal Stomach	stomach
50	chr3:112249200-112276000	Weak transcription	Spleen	Spleen

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