Variant report

Variant	nsv591921
Chromosome Location	chr3:142762487-142841740
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1829)
CpG islands
(count:1467)
Chromatin interactive
region (count:92)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:1829 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:142837672-142837874	K562	blood:	n/a	n/a
2	ARID3A	chr3:142789975-142790349	HepG2	liver:	n/a	n/a
3	ARID3A	chr3:142803838-142804349	K562	blood:	n/a	n/a
4	ATF1	chr3:142784502-142784941	K562	blood:	n/a	n/a
5	ATF1	chr3:142803807-142804295	K562	blood:	n/a	n/a
6	ATF2	chr3:142800161-142800560	GM12878	blood:	n/a	n/a
7	ATF2	chr3:142837530-142838477	GM12878	blood:	n/a	n/a
8	ATF2	chr3:142779636-142780189	GM12878	blood:	n/a	n/a
9	ATF2	chr3:142841443-142842980	GM12878	blood:	n/a	n/a
10	ATF2	chr3:142800563-142801576	GM12878	blood:	n/a	n/a
11	ATF2	chr3:142803887-142804301	GM12878	blood:	n/a	n/a
12	ATF2	chr3:142822452-142822822	GM12878	blood:	n/a	n/a
13	ATF2	chr3:142800788-142801567	GM12878	blood:	n/a	n/a
14	ATF2	chr3:142779632-142780164	GM12878	blood:	n/a	n/a
15	ATF2	chr3:142841288-142842913	GM12878	blood:	n/a	n/a
16	ATF3	chr3:142803887-142804219	K562	blood:	n/a	n/a
17	ATF3	chr3:142803873-142804350	K562	blood:	n/a	n/a
18	BACH1	chr3:142781958-142782136	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr3:142837531-142837535	H1-hESC	embryonic stem cell:	n/a	n/a
20	BACH1	chr3:142837795-142838541	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chr3:142803916-142804228	K562	blood:	n/a	n/a
22	BATF	chr3:142779757-142780125	GM12878	blood:	n/a	n/a
23	BATF	chr3:142779783-142780036	GM12878	blood:	n/a	n/a
24	BATF	chr3:142800830-142801490	GM12878	blood:	n/a	chr3:142800940-142800949
25	BATF	chr3:142800177-142800471	GM12878	blood:	n/a	n/a
26	BATF	chr3:142803941-142804218	GM12878	blood:	n/a	n/a
27	BATF	chr3:142800946-142801492	GM12878	blood:	n/a	n/a
28	BCL11A	chr3:142800836-142801552	GM12878	blood:	n/a	n/a
29	BCL11A	chr3:142841532-142841759	GM12878	blood:	n/a	n/a
30	BCL11A	chr3:142779860-142780063	GM12878	blood:	n/a	n/a
31	BCL11A	chr3:142841427-142841764	GM12878	blood:	n/a	n/a
32	BCL11A	chr3:142800821-142801156	GM12878	blood:	n/a	n/a
33	BCL11A	chr3:142801197-142801460	GM12878	blood:	n/a	n/a
34	BCL11A	chr3:142804013-142804193	GM12878	blood:	n/a	n/a
35	BCL3	chr3:142800862-142801445	GM12878	blood:	n/a	n/a
36	BCL3	chr3:142803821-142804430	K562	blood:	n/a	n/a
37	BCLAF1	chr3:142837754-142838482	GM12878	blood:	n/a	chr3:142838423-142838436
38	BCLAF1	chr3:142803732-142804331	K562	blood:	n/a	n/a
39	BCLAF1	chr3:142800834-142801505	GM12878	blood:	n/a	n/a
40	BCLAF1	chr3:142839612-142840135	GM12878	blood:	n/a	chr3:142839630-142839643 chr3:142839627-142839636 chr3:142839624-142839633
41	BCLAF1	chr3:142779676-142780164	GM12878	blood:	n/a	n/a
42	BCLAF1	chr3:142803740-142804307	K562	blood:	n/a	n/a
43	BCLAF1	chr3:142841375-142842934	GM12878	blood:	n/a	chr3:142842423-142842432 chr3:142842634-142842643
44	BCLAF1	chr3:142839701-142840519	GM12878	blood:	n/a	n/a
45	BCLAF1	chr3:142838819-142839310	GM12878	blood:	n/a	chr3:142838855-142838868 chr3:142838912-142838925 chr3:142838860-142838869 chr3:142838918-142838927 chr3:142838915-142838924 chr3:142838919-142838932 chr3:142838918-142838931
46	BCLAF1	chr3:142800816-142801646	GM12878	blood:	n/a	n/a
47	BHLHE40	chr3:142839766-142840539	GM12878	blood:	n/a	n/a
48	BHLHE40	chr3:142837636-142838338	K562	blood:	n/a	n/a
49	BHLHE40	chr3:142800857-142801518	GM12878	blood:	n/a	n/a
50	BHLHE40	chr3:142838100-142838745	GM12878	blood:	n/a	chr3:142838696-142838712 chr3:142838595-142838611 chr3:142838699-142838715 chr3:142838693-142838709 chr3:142838695-142838711

(count:1467 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:142837252-142837302	HAEpiC	amniotic membrane:	n/a
2	chr3:142839022-142839072	HRCEpiC	kidney:	n/a
3	chr3:142840240-142840290	GM12891	blood:	n/a
4	chr3:142837252-142837302	HAEpiC	amniotic membrane:	n/a
5	chr3:142839022-142839072	HRCEpiC	kidney:	n/a
6	chr3:142840240-142840290	GM12891	blood:	n/a
7	chr3:142837472-142837522	NHDF-neo	bronchial:	n/a
8	chr3:142837995-142838045	HRCEpiC	kidney:	n/a
9	chr3:142839991-142840041	T-47D	breast:	n/a
10	chr3:142840837-142840887	HEEpiC	esophagus:	n/a
11	chr3:142838320-142838370	H1-hESC	embryonic stem cell:	embryo
12	chr3:142841719-142841769	AG04449	skin:	fetal
13	chr3:142790398-142790448	HRPEpiC	eye:	n/a
14	chr3:142837564-142837614	Jurkat	blood:	n/a
15	chr3:142837252-142837302	ECC-1	luminal epithelium:	n/a
16	chr3:142838847-142838897	LNCaP	prostate:	n/a
17	chr3:142837529-142837579	PANC-1	pancreas:	n/a
18	chr3:142840837-142840887	SK-N-SH	brain:	n/a
19	chr3:142775293-142775343	Hepatocyte	liver:	n/a
20	chr3:142838938-142838988	GM06990	blood:	n/a
21	chr3:142837252-142837302	HIPEpiC	eye:	n/a
22	chr3:142838320-142838370	HepG2	liver:	n/a
23	chr3:142775293-142775343	PANC-1	pancreas:	n/a
24	chr3:142837995-142838045	NHDF-neo	bronchial:	n/a
25	chr3:142839903-142839953	PFSK-1	brain:	n/a
26	chr3:142839991-142840041	NH-A	brain:	n/a
27	chr3:142840129-142840179	HRE	kidney:	n/a
28	chr3:142839837-142839887	RPTEC	kidney:	n/a
29	chr3:142838003-142838053	U87	brain:	n/a
30	chr3:142838003-142838053	Jurkat	blood:	n/a
31	chr3:142775293-142775343	U87	brain:	n/a
32	chr3:142837995-142838045	HAEpiC	amniotic membrane:	n/a
33	chr3:142837472-142837522	BJ	skin:	n/a
34	chr3:142841719-142841769	LNCaP	prostate:	n/a
35	chr3:142838003-142838053	K562	blood:	n/a
36	chr3:142835844-142835894	AG09319	gingival:	n/a
37	chr3:142838938-142838988	HMEC	breast:	n/a
38	chr3:142837472-142837522	Hela-S3	cervix:	n/a
39	chr3:142839903-142839953	SK-N-MC	brain:	n/a
40	chr3:142838082-142838132	HRE	kidney:	n/a
41	chr3:142790398-142790448	HEEpiC	esophagus:	n/a
42	chr3:142837564-142837614	NHBE	bronchial:	n/a
43	chr3:142839578-142839628	AG04449	skin:	fetal
44	chr3:142838847-142838897	PANC-1	pancreas:	n/a
45	chr3:142837252-142837302	HCT-116	colon:	n/a
46	chr3:142836347-142836397	MCF10A-Er-Src	breast:	n/a
47	chr3:142837995-142838045	HepG2	liver:	n/a
48	chr3:142790398-142790448	HMEC	breast:	n/a
49	chr3:142790398-142790448	H1-hESC	embryonic stem cell:	embryo
50	chr3:142790398-142790448	AG09309	skin:	n/a

(count:92 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr3:142760427..142762094-chr3:142762981..142765806,2	K562	blood:
2	chr3:142839497..142841574-chr3:143081300..143083347,2	K562	blood:
3	chr3:142799728..142802020-chr3:142842393..142844077,2	K562	blood:
4	chr3:142768453..142771583-chr3:142772247..142775036,3	MCF-7	breast:
5	chr3:142815403..142818636-chr3:142818743..142822345,3	K562	blood:
6	chr3:142773649..142775353-chr3:142777692..142779387,2	K562	blood:
7	chr3:142794271..142797141-chr3:142844007..142845720,2	K562	blood:
8	chr3:142760714..142763385-chr3:142766244..142768333,2	MCF-7	breast:
9	chr3:142805683..142809398-chr3:142813217..142818159,4	K562	blood:
10	chr3:142782763..142785207-chr3:142789429..142791710,3	K562	blood:
11	chr3:142720400..142721935-chr3:142786483..142788074,2	MCF-7	breast:
12	chr3:142841180..142845810-chr3:142884202..142887242,4	K562	blood:
13	chr3:142809779..142811759-chr3:142826073..142828537,2	K562	blood:
14	chr3:142720333..142723024-chr3:142799312..142801743,2	K562	blood:
15	chr3:142791929..142795122-chr3:142795804..142798158,4	K562	blood:
16	chr3:142787448..142789690-chr3:143147155..143148853,2	K562	blood:
17	chr3:142719801..142721977-chr3:142838395..142840175,2	K562	blood:
18	chr3:142805513..142808227-chr3:142808677..142811250,2	K562	blood:
19	chr3:142832736..142834624-chr3:142842242..142844343,2	K562	blood:
20	chr3:142801559..142805670-chr3:142819651..142821823,3	K562	blood:
21	chr3:142781075..142783865-chr3:142785035..142788553,3	K562	blood:
22	chr3:142791929..142795122-chr3:142795804..142797960,4	K562	blood:
23	chr3:142775856..142778240-chr3:142884608..142886181,2	K562	blood:
24	chr3:142782552..142784422-chr3:142838068..142840102,2	K562	blood:
25	chr3:142781075..142783865-chr3:142785035..142787679,2	K562	blood:
26	chr3:142764453..142766415-chr3:142770589..142773461,2	K562	blood:
27	chr3:142786465..142789211-chr3:142837997..142840855,2	K562	blood:
28	chr3:142839097..142841882-chr3:143060810..143062990,2	K562	blood:
29	chr3:142295506..142297981-chr3:142837321..142839389,2	K562	blood:
30	chr3:142835479..142837341-chr3:143085961..143087735,2	K562	blood:
31	chr3:142806692..142808957-chr3:142860540..142862798,2	K562	blood:
32	chr3:142769496..142773173-chr3:142775914..142778153,3	K562	blood:
33	chr3:142816543..142819154-chr3:142830617..142832847,2	K562	blood:
34	chr3:142821256..142824005-chr3:142845694..142847752,2	K562	blood:
35	chr3:142768453..142771583-chr3:142772247..142775036,3	MCF-7	breast:
36	chr3:142771143..142772796-chr3:142793296..142795434,2	K562	blood:
37	chr3:142839696..142842108-chr3:143048440..143050143,2	K562	blood:
38	chr3:142736965..142738865-chr3:142760719..142762498,2	K562	blood:
39	chr3:142795942..142798929-chr3:142838470..142841083,3	K562	blood:
40	chr3:142835029..142837215-chr3:142844723..142846346,2	MCF-7	breast:
41	chr3:142805513..142808227-chr3:142808677..142811250,2	K562	blood:
42	chr3:142771385..142780409-chr3:142780501..142789449,10	K562	blood:
43	chr3:142809779..142811759-chr3:142826073..142828537,2	K562	blood:
44	chr3:142814191..142816604-chr3:142843060..142844617,2	K562	blood:
45	chr3:142820980..142823607-chr3:142836100..142838723,2	K562	blood:
46	chr3:142769496..142773173-chr3:142775914..142778153,3	K562	blood:
47	chr3:142839303..142841374-chr3:143036089..143037614,2	K562	blood:
48	chr3:142796365..142799329-chr3:142833969..142835708,2	K562	blood:
49	chr3:142805683..142809398-chr3:142813217..142818159,4	K562	blood:
50	chr3:142838518..142840970-chr3:143064617..143066302,2	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-U2SURP-1	chr3:142803556-142803787	XLOC_002847
2	lnc-CHST2-1	chr3:142830991-142831201	XLOC_002848
3	lnc-U2SURP-1	chr3:142802859-142803060	XLOC_002847
4	lnc-CHST2-1	chr3:142830644-142830800	XLOC_002848

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	SR140	hsa-miR-29c-3p	chr3:142776910-142776931
2	U2SURP	hsa-miR-29c-3p	chr3:142776924-142776930

Variant related genes	Relation type
ENSG00000243733	TF binding region
ENSG00000241679	TF binding region
CHST2	TF binding region
ENSG00000243733	CpG island
ENSG00000241679	CpG island
CHST2	CpG island
ENSG00000211483	chromatin interactions
ENSG00000163714	chromatin interactions
ENSG00000241679	chromatin interactions
ENSG00000175040	chromatin interactions
ENSG00000268129	chromatin interactions
ENSG00000241570	chromatin interactions
ENSG00000175054	chromatin interactions
ENSG00000243733	chromatin interactions
ENSG00000240012	chromatin interactions
ENSG00000240950	chromatin interactions
VEGFA	miRNA target sites

Extended variants
information (count: 2849 )
Associated
traits (count: 61 )

Variant overlapped rSNPs/rCNVs (count:2849 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6805417	chr3:142762487-142762488	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs34165568	chr3:142762510-142762511	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs13088422	chr3:142762511-142762512	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
4	rs550879072	chr3:142762514-142762515	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs116198671	chr3:142762545-142762546	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs529930888	chr3:142762559-142762560	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs72365159	chr3:142762560-142762561	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs201144127	chr3:142762561-142762562	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs5853088	chr3:142762575-142762576	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs56809197	chr3:142762577-142762578	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs559942509	chr3:142762615-142762616	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs528509580	chr3:142762671-142762672	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs566576770	chr3:142762711-142762712	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs546938600	chr3:142762718-142762719	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs533936339	chr3:142762729-142762730	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs551979052	chr3:142762730-142762731	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs563990838	chr3:142762768-142762769	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs144876885	chr3:142762776-142762777	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs143537292	chr3:142762796-142762797	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs556452282	chr3:142762830-142762831	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs574747893	chr3:142762907-142762908	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs369204857	chr3:142762908-142762909	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs9877128	chr3:142762910-142762911	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
24	rs76396554	chr3:142762921-142762922	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs9877135	chr3:142762930-142762931	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs546312138	chr3:142763063-142763064	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs112082478	chr3:142763097-142763098	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs71153999	chr3:142763132-142763133	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs397991280	chr3:142763148-142763149	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs13094291	chr3:142763151-142763152	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs138030115	chr3:142763153-142763154	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs543805179	chr3:142763154-142763155	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs13093876	chr3:142763181-142763182	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs13094310	chr3:142763182-142763183	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs142651433	chr3:142763208-142763209	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs13326706	chr3:142763209-142763210	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs529971119	chr3:142763212-142763213	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs373245033	chr3:142763228-142763229	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs144927845	chr3:142763292-142763293	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs138800027	chr3:142763332-142763333	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs552280438	chr3:142763361-142763362	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs570414849	chr3:142763384-142763385	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs371276483	chr3:142763387-142763388	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs150828442	chr3:142763460-142763461	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs139291439	chr3:142763517-142763518	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs111994676	chr3:142763528-142763529	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs535785024	chr3:142763533-142763534	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs554026896	chr3:142763542-142763543	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs575790756	chr3:142763550-142763551	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs539617953	chr3:142763553-142763554	Strong transcription Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:61)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
microdeletion syndrome	22180640	CNVD
Basal cell lymphoma	21115979	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	18645599	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Hepatocellular carcinoma	16750200	CNVD
Lung cancer	16740712	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
Blepharophimosis-ptosis-epicanthus inversus syndrome	22067867	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
abnormal development	18461090	CNVD
Cancer	21129771	CNVD
Ovarian cancer	23621864	CNVD
Breast cancer	21364760	CNVD
Congenital anomalies of the kidney and urinary tract	20605837	CNVD
Breast cancer	22522925	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Pancreatic cancer	17952125	CNVD
Mental retardation	17847001	CNVD
Basal cell lymphoma	17170743	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1523 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:142727400-142764400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr3:142728600-142769000	Weak transcription	Pancreas	Pancrea
3	chr3:142729200-142765000	Strong transcription	Dnd41	blood
4	chr3:142729200-142785200	Weak transcription	Aorta	Aorta
5	chr3:142729400-142764800	Strong transcription	K562	blood
6	chr3:142729800-142764800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr3:142729800-142765000	Strong transcription	Primary T helper cells fromperipheralblood	blood
8	chr3:142730200-142765000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr3:142730200-142765000	Strong transcription	Fetal Thymus	thymus
10	chr3:142732800-142765000	Strong transcription	HSMM	muscle
11	chr3:142733200-142764400	Strong transcription	HUES6 Cell Line	embryonic stem cell
12	chr3:142734400-142785200	Weak transcription	Esophagus	oesophagus
13	chr3:142740000-142769200	Weak transcription	Gastric	stomach
14	chr3:142740200-142763200	Weak transcription	Lung	lung
15	chr3:142742400-142764800	Strong transcription	iPS-18 Cell Line	embryonic stem cell
16	chr3:142742600-142764200	Strong transcription	HUES64 Cell Line	embryonic stem cell
17	chr3:142743600-142763200	Strong transcription	HUES48 Cell Line	embryonic stem cell
18	chr3:142743600-142764400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
19	chr3:142749000-142763600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr3:142749000-142784200	Weak transcription	Small Intestine	intestine
21	chr3:142749200-142763000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr3:142749200-142763600	Weak transcription	Psoas Muscle	Psoas
23	chr3:142749200-142765000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr3:142749200-142769000	Weak transcription	Right Ventricle	heart
25	chr3:142749200-142779000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
26	chr3:142751200-142762600	Weak transcription	Fetal Intestine Small	intestine
27	chr3:142751200-142763000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr3:142753400-142762600	Weak transcription	Fetal Stomach	stomach
29	chr3:142754200-142769800	Weak transcription	Colonic Mucosa	Colon
30	chr3:142755200-142764800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr3:142755400-142764800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
32	chr3:142755800-142765000	Strong transcription	Primary monocytes fromperipheralblood	blood
33	chr3:142755800-142765000	Strong transcription	Primary T helper cells PMA-I stimulated	--
34	chr3:142755800-142765000	Strong transcription	Monocytes-CD14+_RO01746	blood
35	chr3:142756000-142774400	Weak transcription	Stomach Mucosa	stomach
36	chr3:142756200-142762800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr3:142756200-142762800	Weak transcription	Brain Cingulate Gyrus	brain
38	chr3:142756200-142763000	Weak transcription	Brain Inferior Temporal Lobe	brain
39	chr3:142756200-142769200	Weak transcription	Placenta Amnion	Placenta Amnion
40	chr3:142757400-142762600	Weak transcription	Brain Germinal Matrix	brain
41	chr3:142759800-142764400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr3:142759800-142765000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
43	chr3:142760000-142765000	Strong transcription	Hela-S3	cervix
44	chr3:142760600-142763000	Strong transcription	GM12878-XiMat	blood
45	chr3:142760600-142764200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr3:142760600-142764400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
47	chr3:142760600-142764600	Strong transcription	A549	lung
48	chr3:142760600-142764800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr3:142760600-142764800	Strong transcription	Primary T cells from cord blood	blood
50	chr3:142760600-142764800	Strong transcription	Primary T cells fromperipheralblood	blood

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