No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs755202 |
chr3:194990363-194990364 |
Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers
|
Chromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs534915359 |
chr3:194990404-194990405 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs116288402 |
chr3:194990414-194990415 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs577863592 |
chr3:194990431-194990432 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs7626389 |
chr3:194990544-194990545 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs117552089 |
chr3:194990553-194990554 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs545981969 |
chr3:194990579-194990580 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs557139206 |
chr3:194990607-194990608 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs575676646 |
chr3:194990690-194990691 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs542683555 |
chr3:194990709-194990710 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs368795625 |
chr3:194990722-194990723 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs528801014 |
chr3:194990792-194990793 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs564364876 |
chr3:194990805-194990806 |
Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs142830556 |
chr3:194990888-194990889 |
Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs565142315 |
chr3:194990988-194990989 |
Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs74943389 |
chr3:194991000-194991001 |
Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs551472528 |
chr3:194991007-194991008 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs62285259 |
chr3:194991022-194991023 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
19 |
rs530608741 |
chr3:194991041-194991042 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs113482363 |
chr3:194991066-194991067 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs372383983 |
chr3:194991079-194991080 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs567228665 |
chr3:194991101-194991102 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs574022267 |
chr3:194991106-194991107 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs534915500 |
chr3:194991157-194991158 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs546886890 |
chr3:194991165-194991166 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs538148595 |
chr3:194991166-194991167 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs572464634 |
chr3:194991187-194991188 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs538490603 |
chr3:194991214-194991215 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs186432312 |
chr3:194991216-194991217 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs370476236 |
chr3:194991220-194991221 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs7640100 |
chr3:194991221-194991222 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
32 |
rs554675785 |
chr3:194991265-194991266 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs201594607 |
chr3:194991278-194991279 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs372983273 |
chr3:194991337-194991338 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs540548399 |
chr3:194991395-194991396 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs565205225 |
chr3:194991402-194991403 |
Active TSS Flanking Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs74954858 |
chr3:194991404-194991405 |
Active TSS Flanking Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs376126877 |
chr3:194991426-194991427 |
Active TSS Flanking Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs369979304 |
chr3:194991556-194991557 |
Active TSS Flanking Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs544508884 |
chr3:194991664-194991665 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs563097755 |
chr3:194991732-194991733 |
Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs530563578 |
chr3:194991826-194991827 |
Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|