No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs12641989 |
chr4:3419840-3419841 |
Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs144023392 |
chr4:3419845-3419846 |
Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs537188974 |
chr4:3419859-3419860 |
Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs150953012 |
chr4:3419860-3419861 |
Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs140790905 |
chr4:3419866-3419867 |
Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs554877996 |
chr4:3419913-3419914 |
Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs185398542 |
chr4:3419954-3419955 |
Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs553668395 |
chr4:3419955-3419956 |
Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs16844316 |
chr4:3419970-3419971 |
Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
10 |
rs190393786 |
chr4:3419973-3419974 |
Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs743714 |
chr4:3419986-3419987 |
Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
12 |
rs71608280 |
chr4:3420008-3420009 |
Weak transcription Strong transcription Enhancers Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs575647558 |
chr4:3420015-3420016 |
Weak transcription Strong transcription Enhancers Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs573546526 |
chr4:3420024-3420025 |
Weak transcription Strong transcription Enhancers Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs563896036 |
chr4:3420025-3420026 |
Weak transcription Strong transcription Enhancers Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs563129467 |
chr4:3420032-3420033 |
Weak transcription Strong transcription Enhancers Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs112081534 |
chr4:3420036-3420037 |
Weak transcription Strong transcription Enhancers Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs79348356 |
chr4:3420112-3420113 |
Weak transcription Strong transcription Enhancers Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs73792070 |
chr4:3420123-3420124 |
Weak transcription Strong transcription Enhancers Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
20 |
rs528394147 |
chr4:3420212-3420213 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs551166244 |
chr4:3420220-3420221 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs551077868 |
chr4:3420222-3420223 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs192074358 |
chr4:3420232-3420233 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs571266537 |
chr4:3420238-3420239 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs3748037 |
chr4:3420271-3420272 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
26 |
rs528437584 |
chr4:3420316-3420317 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs184085135 |
chr4:3420320-3420321 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs567383766 |
chr4:3420346-3420347 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs536812762 |
chr4:3420360-3420361 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs3748036 |
chr4:3420371-3420372 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
31 |
rs567043542 |
chr4:3420388-3420389 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs539367385 |
chr4:3420413-3420414 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs558660169 |
chr4:3420414-3420415 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs188473680 |
chr4:3420452-3420453 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs537862729 |
chr4:3420473-3420474 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs554613262 |
chr4:3420500-3420501 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs574592880 |
chr4:3420512-3420513 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs540928583 |
chr4:3420572-3420573 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs73193394 |
chr4:3420573-3420574 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs542375558 |
chr4:3420627-3420628 |
Weak transcription Strong transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs559165022 |
chr4:3420633-3420634 |
Weak transcription Strong transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs112173312 |
chr4:3420641-3420642 |
Weak transcription Strong transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs555486960 |
chr4:3420673-3420674 |
Weak transcription Strong transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs573053302 |
chr4:3420706-3420707 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs545316241 |
chr4:3420745-3420746 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs34799306 |
chr4:3420746-3420747 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs530493367 |
chr4:3420747-3420748 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs141399363 |
chr4:3420812-3420813 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs560918182 |
chr4:3420851-3420852 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs545533509 |
chr4:3420907-3420908 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|