Variant report

Variant	nsv594807
Chromosome Location	chr4:89904124-89986326
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:919)
CpG islands
(count:245)
Chromatin interactive
region (count:46)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:919 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:89961145-89961404	K562	blood:	n/a	n/a
2	ARID3A	chr4:89943414-89943470	HepG2	liver:	n/a	n/a
3	ARID3A	chr4:89948194-89948197	K562	blood:	n/a	n/a
4	ARID3A	chr4:89920128-89920328	HepG2	liver:	n/a	n/a
5	ARID3A	chr4:89931039-89931360	K562	blood:	n/a	n/a
6	ARID3A	chr4:89930339-89930693	K562	blood:	n/a	n/a
7	ARID3A	chr4:89930339-89930781	HepG2	liver:	n/a	n/a
8	ARID3A	chr4:89944776-89944777	K562	blood:	n/a	n/a
9	ARID3A	chr4:89923776-89923881	K562	blood:	n/a	n/a
10	ARID3A	chr4:89922131-89922480	HepG2	liver:	n/a	n/a
11	ARID3A	chr4:89922042-89922529	K562	blood:	n/a	n/a
12	ARID3A	chr4:89945226-89945540	HepG2	liver:	n/a	n/a
13	ATF1	chr4:89961159-89961471	K562	blood:	n/a	n/a
14	ATF1	chr4:89922055-89922575	K562	blood:	n/a	n/a
15	ATF2	chr4:89977903-89978600	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF3	chr4:89922015-89922543	K562	blood:	n/a	n/a
17	ATF3	chr4:89978212-89978500	K562	blood:	n/a	chr4:89978377-89978386
18	BACH1	chr4:89930952-89931115	K562	blood:	n/a	n/a
19	BACH1	chr4:89922005-89922240	K562	blood:	n/a	n/a
20	BACH1	chr4:89943448-89943576	K562	blood:	n/a	n/a
21	BATF	chr4:89976312-89976552	GM12878	blood:	n/a	n/a
22	BATF	chr4:89943869-89944191	GM12878	blood:	n/a	n/a
23	BATF	chr4:89943943-89944177	GM12878	blood:	n/a	n/a
24	BCL11A	chr4:89965347-89965662	GM12878	blood:	n/a	n/a
25	BHLHE40	chr4:89965496-89965675	GM12878	blood:	n/a	n/a
26	BHLHE40	chr4:89921833-89922448	K562	blood:	n/a	n/a
27	BHLHE40	chr4:89977760-89978623	K562	blood:	n/a	chr4:89978378-89978387 chr4:89978377-89978386 chr4:89978377-89978386 chr4:89978371-89978392 chr4:89978376-89978385 chr4:89978375-89978388
28	BHLHE40	chr4:89978259-89978549	HepG2	liver:	n/a	chr4:89978378-89978387 chr4:89978377-89978386 chr4:89978377-89978386 chr4:89978371-89978392 chr4:89978376-89978385 chr4:89978375-89978388
29	BHLHE40	chr4:89945258-89945525	K562	blood:	n/a	n/a
30	BHLHE40	chr4:89978194-89978582	GM12878	blood:	n/a	chr4:89978378-89978387 chr4:89978377-89978386 chr4:89978377-89978386 chr4:89978371-89978392 chr4:89978376-89978385 chr4:89978375-89978388
31	BRCA1	chr4:89928536-89928542	HepG2	liver:	n/a	n/a
32	BRCA1	chr4:89978139-89978480	Hela-S3	cervix:	n/a	n/a
33	CBX3	chr4:89977971-89978525	K562	blood:	n/a	n/a
34	CBX3	chr4:89936060-89936392	K562	blood:	n/a	n/a
35	CBX3	chr4:89977838-89978641	K562	blood:	n/a	n/a
36	CBX3	chr4:89936077-89936464	K562	blood:	n/a	n/a
37	CBX3	chr4:89957671-89958234	K562	blood:	n/a	n/a
38	CCNT2	chr4:89922022-89922249	K562	blood:	n/a	n/a
39	CCNT2	chr4:89945456-89945656	K562	blood:	n/a	n/a
40	CCNT2	chr4:89930369-89930696	K562	blood:	n/a	n/a
41	CCNT2	chr4:89978144-89978630	K562	blood:	n/a	n/a
42	CEBPB	chr4:89965671-89965967	HepG2	liver:	n/a	n/a
43	CEBPB	chr4:89961108-89961475	IMR90	lung:	n/a	n/a
44	CEBPB	chr4:89921981-89922363	K562	blood:	n/a	chr4:89922182-89922193 chr4:89922180-89922193 chr4:89922180-89922191 chr4:89922180-89922193
45	CEBPB	chr4:89906601-89906833	A549	lung:	n/a	n/a
46	CEBPB	chr4:89961161-89961414	A549	lung:	n/a	n/a
47	CEBPB	chr4:89930330-89930613	K562	blood:	n/a	n/a
48	CEBPB	chr4:89924853-89924991	K562	blood:	n/a	n/a
49	CEBPB	chr4:89961095-89961500	K562	blood:	n/a	n/a
50	CEBPB	chr4:89930295-89930664	HepG2	liver:	n/a	n/a

(count:245 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:89978566-89978616	HRE	kidney:	n/a
2	chr4:89978566-89978616	HRE	kidney:	n/a
3	chr4:89978300-89978350	NB4	blood:	n/a
4	chr4:89978300-89978350	AG04449	skin:	fetal
5	chr4:89976368-89976418	GM12878	blood:	n/a
6	chr4:89978566-89978616	K562	blood:	n/a
7	chr4:89978300-89978350	HIPEpiC	eye:	n/a
8	chr4:89978300-89978350	IMR90	lung:	fetal
9	chr4:89978566-89978616	ECC-1	luminal epithelium:	n/a
10	chr4:89978566-89978616	HCPEpiC	choroid plexus:	n/a
11	chr4:89978251-89978301	Hela-S3	cervix:	n/a
12	chr4:89978300-89978350	HNPCEpiC	eye:	n/a
13	chr4:89976368-89976418	HMEC	breast:	n/a
14	chr4:89978566-89978616	AG10803	skin:	n/a
15	chr4:89976368-89976418	ProgFib	skin:	n/a
16	chr4:89978251-89978301	CMK	blood:	n/a
17	chr4:89978300-89978350	SK-N-SH	brain:	n/a
18	chr4:89976368-89976418	A549	lung:	n/a
19	chr4:89976368-89976418	SK-N-SH	brain:	n/a
20	chr4:89978300-89978350	HRE	kidney:	n/a
21	chr4:89978300-89978350	HEEpiC	esophagus:	n/a
22	chr4:89978300-89978350	HPAEpiC	pulmonary alveolar:	n/a
23	chr4:89978251-89978301	HPAEpiC	pulmonary alveolar:	n/a
24	chr4:89978251-89978301	Jurkat	blood:	n/a
25	chr4:89978300-89978350	U87	brain:	n/a
26	chr4:89978300-89978350	LNCaP	prostate:	n/a
27	chr4:89978300-89978350	AG09319	gingival:	n/a
28	chr4:89978300-89978350	HCF	heart:	n/a
29	chr4:89976368-89976418	SAEC	small airway:	n/a
30	chr4:89978566-89978616	AoSMC	blood vessel:	n/a
31	chr4:89976368-89976418	GM12892	blood:	n/a
32	chr4:89978300-89978350	Hela-S3	cervix:	n/a
33	chr4:89978251-89978301	HCM	heart:	n/a
34	chr4:89978300-89978350	GM12892	blood:	n/a
35	chr4:89978300-89978350	ECC-1	luminal epithelium:	n/a
36	chr4:89978251-89978301	SK-N-SH_RA	brain:	n/a
37	chr4:89978300-89978350	HRCEpiC	kidney:	n/a
38	chr4:89978566-89978616	MCF-7	breast:	n/a
39	chr4:89976368-89976418	MCF10A-Er-Src	breast:	n/a
40	chr4:89978566-89978616	LNCaP	prostate:	n/a
41	chr4:89976368-89976418	LNCaP	prostate:	n/a
42	chr4:89978566-89978616	PrEC	prostate:	n/a
43	chr4:89978300-89978350	NT2-D1	testis:	n/a
44	chr4:89978251-89978301	IMR90	lung:	fetal
45	chr4:89978251-89978301	HL-60	blood:	n/a
46	chr4:89978300-89978350	BE2_C	brain:	n/a
47	chr4:89978300-89978350	SKMC	muscle:	n/a
48	chr4:89978251-89978301	AG09319	gingival:	n/a
49	chr4:89978566-89978616	NHDF-neo	bronchial:	n/a
50	chr4:89978251-89978301	Hepatocyte	liver:	n/a

(count:46 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:129308036..129308806-chr4:89978207..89978742,2	HCT-116	colon:
2	chr13:45005434..45006381-chr4:89976624..89977229,2	MCF-7	breast:
3	chr4:89935095..89936816-chr4:89938623..89940372,2	K562	blood:
4	chr4:89970076..89973919-chr4:89975021..89978811,7	K562	blood:
5	chr4:89920240..89921927-chr4:89922871..89925783,2	MCF-7	breast:
6	chr4:89967506..89970180-chr4:89970211..89972228,2	K562	blood:
7	chr4:89937387..89940486-chr4:89941905..89944356,3	K562	blood:
8	chr4:89958647..89961976-chr4:89962746..89966068,3	K562	blood:
9	chr4:89441809..89444067-chr4:89942046..89944719,2	K562	blood:
10	chr4:89965401..89967531-chr4:89976888..89979079,2	K562	blood:
11	chr4:89923434..89926006-chr4:89929564..89931066,2	K562	blood:
12	chr4:89917204..89919700-chr4:89921464..89923708,2	K562	blood:
13	chr4:89977166..89979264-chr4:90032025..90033904,2	K562	blood:
14	chr4:89436928..89438530-chr4:89943271..89945342,2	K562	blood:
15	chr4:89743956..89746323-chr4:89976893..89978969,2	K562	blood:
16	chr4:89963957..89965462-chr4:89973010..89975706,2	K562	blood:
17	chr4:89918481..89920513-chr4:89921696..89923583,2	MCF-7	breast:
18	chr4:89920516..89923501-chr4:89978516..89980046,2	K562	blood:
19	chr4:89937387..89940486-chr4:89941905..89944356,3	K562	blood:
20	chr4:89918481..89920513-chr4:89921696..89923583,2	MCF-7	breast:
21	chr4:89958290..89961976-chr4:89962319..89966068,4	K562	blood:
22	chr4:89739570..89740418-chr4:89944914..89945450,2	K562	blood:
23	chr4:89963957..89965462-chr4:89973010..89975706,2	K562	blood:
24	chr4:89962640..89965457-chr4:89973321..89975706,2	K562	blood:
25	chr4:89935095..89936816-chr4:89938623..89940372,2	K562	blood:
26	chr4:89917204..89919700-chr4:89921464..89923708,2	K562	blood:
27	chr4:89923434..89926006-chr4:89929564..89931066,2	K562	blood:
28	chr4:89962640..89965457-chr4:89973321..89975706,2	K562	blood:
29	chr4:89627418..89628280-chr4:89944914..89945722,2	K562	blood:
30	chr4:89739441..89740830-chr4:89944929..89945920,11	MCF-7	breast:
31	chr4:89900502..89902834-chr4:89906493..89908325,2	K562	blood:
32	chr4:89739546..89740487-chr4:89944633..89945904,7	MCF-7	breast:
33	chr4:89965264..89968195-chr4:89977479..89979113,3	K562	blood:
34	chr4:89920240..89921927-chr4:89922871..89925783,2	MCF-7	breast:
35	chr4:89958647..89961976-chr4:89962746..89966068,3	K562	blood:
36	chr4:89743339..89746307-chr4:89945408..89946959,2	K562	blood:
37	chr4:89958290..89961976-chr4:89962319..89966068,4	K562	blood:
38	chr4:89978596..89980145-chr4:89983083..89985851,2	K562	blood:
39	chr4:89978596..89980145-chr4:89983083..89985851,2	K562	blood:
40	chr4:89444433..89447084-chr4:89907641..89909631,2	MCF-7	breast:
41	chr4:89942555..89945377-chr4:89950221..89952827,2	K562	blood:
42	chr4:89920516..89923501-chr4:89978516..89980046,2	K562	blood:
43	chr4:89916625..89919056-chr4:89920360..89922873,2	MCF-7	breast:
44	chr4:89967506..89970180-chr4:89970211..89972228,2	K562	blood:
45	chr4:89916625..89919056-chr4:89920360..89922873,2	MCF-7	breast:
46	chr4:89593853..89594728-chr4:89944932..89945908,3	K562	blood:

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	FAM13A	hsa-miR-10b-5p	chr4:89911301-89911325

Variant related genes	Relation type
FAM13A	TF binding region
FAM13A	CpG island
ENSG00000255072	chromatin interactions
ENSG00000139370	chromatin interactions
ENSG00000271359	chromatin interactions
ENSG00000138641	chromatin interactions
ENSG00000138640	chromatin interactions
ENSG00000145337	chromatin interactions

Extended variants
information (count: 2896 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:2896 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1921681	chr4:89904124-89904125	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs144791396	chr4:89904133-89904134	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs7686954	chr4:89904156-89904157	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs77487724	chr4:89904161-89904162	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs371766584	chr4:89904183-89904184	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs574521802	chr4:89904199-89904200	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs541862449	chr4:89904200-89904201	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs192812836	chr4:89904221-89904222	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs566553975	chr4:89904234-89904235	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs564383978	chr4:89904239-89904240	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs575248496	chr4:89904298-89904299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs545843159	chr4:89904319-89904320	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs185374309	chr4:89904334-89904335	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs577000888	chr4:89904355-89904356	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs541357672	chr4:89904374-89904375	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs559634435	chr4:89904387-89904388	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs35096246	chr4:89904505-89904506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs192625538	chr4:89904544-89904545	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs548292973	chr4:89904549-89904550	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs148426942	chr4:89904588-89904589	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs375697662	chr4:89904639-89904640	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs2869973	chr4:89904728-89904729	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs183704742	chr4:89904731-89904732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs534797159	chr4:89904786-89904787	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs549131341	chr4:89904860-89904861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs546784537	chr4:89904872-89904873	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs568386941	chr4:89904910-89904911	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs188465637	chr4:89904977-89904978	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs141706982	chr4:89904986-89904987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs549501002	chr4:89905016-89905017	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs575173335	chr4:89905066-89905067	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs77131120	chr4:89905085-89905086	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs567137009	chr4:89905098-89905099	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs372978720	chr4:89905122-89905123	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs116347675	chr4:89905166-89905167	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs371639603	chr4:89905167-89905168	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs1921682	chr4:89905180-89905181	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs542496706	chr4:89905223-89905224	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs150503800	chr4:89905297-89905298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs12512799	chr4:89905340-89905341	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs552426772	chr4:89905360-89905361	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs564588704	chr4:89905403-89905404	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs78763397	chr4:89905428-89905429	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs10033484	chr4:89905472-89905473	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs202117818	chr4:89905485-89905486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs568220747	chr4:89905486-89905487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs577562698	chr4:89905511-89905512	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs535789935	chr4:89905512-89905513	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs550829844	chr4:89905538-89905539	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs79454701	chr4:89905590-89905591	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Myelodysplastic syndrome	21251322	CNVD
Multiple myeloma	17550852	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	18414403	CNVD
primary effusion lymphomas	17116491	CNVD
Mental retardation	20522426	CNVD
delayed speech	20522426	CNVD
growth disorder	20522426	CNVD
Olfactory neuroblastoma	18408657	CNVD
small cell lung cancer	20016488	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
Colorectal cancer	20459617	CNVD
Acute monocytic leukemia	16498392	CNVD
Multiple myeloma	16616336	CNVD
Esophageal adenocarcinoma	18820669	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myelofibrosis	22110671	CNVD
Parkinson disease	20877625	CNVD
Hirschsprung''s Disease	21712996	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Obesity	20622171	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Cancer	20164919	CNVD

Chromatin state (count:1357 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:89878400-89927600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr4:89879600-89911200	Weak transcription	K562	blood
3	chr4:89879600-89913000	Weak transcription	Aorta	Aorta
4	chr4:89879800-89909200	Weak transcription	Ovary	ovary
5	chr4:89882400-89916400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr4:89889400-89906200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr4:89894000-89922200	Weak transcription	Fetal Kidney	kidney
8	chr4:89895200-89915400	Weak transcription	Fetal Muscle Leg	muscle
9	chr4:89895600-89906000	Weak transcription	Primary hematopoietic stem cells	blood
10	chr4:89896200-89908000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr4:89896800-89934800	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr4:89897400-89912800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr4:89897400-89913000	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr4:89897600-89905600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr4:89898000-89908600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr4:89898600-89914000	Weak transcription	Duodenum Mucosa	Duodenum
17	chr4:89900800-89906600	Weak transcription	Fetal Lung	lung
18	chr4:89900800-89909400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr4:89901000-89905600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr4:89901400-89910800	Weak transcription	HUES64 Cell Line	embryonic stem cell
21	chr4:89902600-89904200	Enhancers	Fetal Intestine Large	intestine
22	chr4:89902600-89904200	Enhancers	Fetal Intestine Small	intestine
23	chr4:89903000-89957200	Weak transcription	HSMM	muscle
24	chr4:89903200-89906200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr4:89903400-89910800	Weak transcription	Fetal Heart	heart
26	chr4:89903400-89936000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr4:89904000-89904200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr4:89904000-89904200	Enhancers	Pancreas	Pancrea
29	chr4:89904000-89904200	Enhancers	Psoas Muscle	Psoas
30	chr4:89904200-89910000	Weak transcription	Fetal Intestine Small	intestine
31	chr4:89904200-89912000	Weak transcription	Psoas Muscle	Psoas
32	chr4:89904200-89918200	Weak transcription	Fetal Intestine Large	intestine
33	chr4:89904200-89927600	Weak transcription	Pancreas	Pancrea
34	chr4:89905600-89906200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr4:89905600-89908200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr4:89906000-89906600	Strong transcription	Primary hematopoietic stem cells	blood
37	chr4:89906000-89910000	Weak transcription	Fetal Stomach	stomach
38	chr4:89906200-89906400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr4:89906200-89906600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr4:89906200-89906800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr4:89906200-89907200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr4:89906200-89907200	Enhancers	HMEC	breast
43	chr4:89906200-89907200	Enhancers	NHDF-Ad	bronchial
44	chr4:89906200-89907200	Enhancers	Osteobl	bone
45	chr4:89906400-89906600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr4:89906400-89906600	Enhancers	A549	lung
47	chr4:89906400-89907000	Enhancers	Muscle Satellite Cultured Cells	--
48	chr4:89906400-89907200	Enhancers	Adipose Nuclei	Adipose
49	chr4:89906400-89907200	Enhancers	Liver	Liver
50	chr4:89906400-89907200	Enhancers	NHLF	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links