Variant report

Variant	nsv596039
Chromosome Location	chr4:165531034-165775547
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1509)
CpG islands
(count:488)
Chromatin interactive
region (count:31)
LncRNA
region (count:14)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1509 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:165669588-165669845	K562	blood:	n/a	n/a
2	ARID3A	chr4:165653087-165653352	K562	blood:	n/a	n/a
3	ARID3A	chr4:165669639-165669801	HepG2	liver:	n/a	n/a
4	ATF1	chr4:165577132-165577324	K562	blood:	n/a	n/a
5	ATF2	chr4:165720564-165721044	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr4:165720732-165721021	H1-hESC	embryonic stem cell:	n/a	n/a
7	BCLAF1	chr4:165700918-165701211	GM12878	blood:	n/a	n/a
8	BHLHE40	chr4:165728807-165729098	HepG2	liver:	n/a	n/a
9	BHLHE40	chr4:165622729-165623164	GM12878	blood:	n/a	chr4:165622923-165622936
10	BHLHE40	chr4:165717007-165717087	GM12878	blood:	n/a	n/a
11	BHLHE40	chr4:165627809-165628164	HepG2	liver:	n/a	n/a
12	BHLHE40	chr4:165669591-165669785	GM12878	blood:	n/a	n/a
13	CBX3	chr4:165621494-165622040	HCT-116	colon:	n/a	n/a
14	CEBPB	chr4:165692199-165692681	MCF-7	breast:	n/a	chr4:165692403-165692414
15	CEBPB	chr4:165640066-165640215	K562	blood:	n/a	chr4:165640124-165640135
16	CEBPB	chr4:165576375-165576654	A549	lung:	n/a	chr4:165576482-165576499 chr4:165576485-165576496 chr4:165576485-165576498 chr4:165576485-165576498
17	CEBPB	chr4:165692224-165692580	HepG2	liver:	n/a	chr4:165692403-165692414
18	CEBPB	chr4:165692230-165692583	A549	lung:	n/a	chr4:165692403-165692414
19	CEBPB	chr4:165639950-165640302	HepG2	liver:	n/a	chr4:165640124-165640135
20	CEBPB	chr4:165692173-165692638	ECC-1	luminal epithelium:	n/a	chr4:165692403-165692414
21	CEBPB	chr4:165601972-165602129	HepG2	liver:	n/a	n/a
22	CEBPB	chr4:165729632-165729844	K562	blood:	n/a	n/a
23	CEBPB	chr4:165720669-165721107	H1-hESC	embryonic stem cell:	n/a	n/a
24	CEBPB	chr4:165692217-165692595	Hela-S3	cervix:	n/a	chr4:165692403-165692414
25	CEBPB	chr4:165692157-165692673	ECC-1	luminal epithelium:	n/a	chr4:165692403-165692414
26	CEBPB	chr4:165638076-165638366	HepG2	liver:	n/a	n/a
27	CEBPB	chr4:165692281-165692594	H1-hESC	embryonic stem cell:	n/a	chr4:165692403-165692414
28	CEBPB	chr4:165692203-165692553	A549	lung:	n/a	chr4:165692403-165692414
29	CEBPB	chr4:165639962-165640378	ECC-1	luminal epithelium:	n/a	chr4:165640124-165640135
30	CEBPB	chr4:165576318-165576661	HepG2	liver:	n/a	chr4:165576482-165576499 chr4:165576485-165576496 chr4:165576485-165576498 chr4:165576485-165576498
31	CEBPB	chr4:165692232-165692567	K562	blood:	n/a	chr4:165692403-165692414
32	CEBPB	chr4:165638182-165638382	A549	lung:	n/a	n/a
33	CEBPB	chr4:165729647-165729814	H1-hESC	embryonic stem cell:	n/a	n/a
34	CEBPB	chr4:165614892-165614996	HepG2	liver:	n/a	chr4:165614921-165614932 chr4:165614921-165614934 chr4:165614923-165614934
35	CEBPB	chr4:165617131-165617376	HepG2	liver:	n/a	chr4:165617257-165617268
36	CEBPB	chr4:165576334-165576621	IMR90	lung:	n/a	chr4:165576482-165576499 chr4:165576485-165576496 chr4:165576485-165576498 chr4:165576485-165576498
37	CEBPB	chr4:165639977-165640282	IMR90	lung:	n/a	chr4:165640124-165640135
38	CEBPB	chr4:165638197-165638315	K562	blood:	n/a	n/a
39	CEBPB	chr4:165639993-165640307	A549	lung:	n/a	chr4:165640124-165640135
40	CEBPB	chr4:165729656-165729856	HepG2	liver:	n/a	n/a
41	CEBPB	chr4:165692223-165692618	MCF-7	breast:	n/a	chr4:165692403-165692414
42	CEBPB	chr4:165638072-165638365	MCF-7	breast:	n/a	n/a
43	CEBPB	chr4:165692825-165692980	K562	blood:	n/a	n/a
44	CEBPB	chr4:165692225-165692594	IMR90	lung:	n/a	chr4:165692403-165692414
45	CEBPB	chr4:165627867-165628136	H1-hESC	embryonic stem cell:	n/a	n/a
46	CEBPB	chr4:165657180-165657490	H1-hESC	embryonic stem cell:	n/a	chr4:165657311-165657324
47	CHD1	chr4:165620422-165620431	H1-hESC	embryonic stem cell:	n/a	n/a
48	CHD2	chr4:165655861-165655934	K562	blood:	n/a	n/a
49	CHD2	chr4:165693287-165693544	K562	blood:	n/a	n/a
50	CHD2	chr4:165720619-165721136	H1-hESC	embryonic stem cell:	n/a	n/a

(count:488 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:165749663-165749713	AG10803	skin:	n/a
2	chr4:165749663-165749713	HCPEpiC	choroid plexus:	n/a
3	chr4:165770585-165770635	ProgFib	skin:	n/a
4	chr4:165727888-165727938	HIPEpiC	eye:	n/a
5	chr4:165735975-165736025	K562	blood:	n/a
6	chr4:165770585-165770635	HL-60	blood:	n/a
7	chr4:165675138-165675188	CMK	blood:	n/a
8	chr4:165749663-165749713	NHDF-neo	bronchial:	n/a
9	chr4:165672394-165672444	NB4	blood:	n/a
10	chr4:165770585-165770635	CMK	blood:	n/a
11	chr4:165628435-165628485	SAEC	small airway:	n/a
12	chr4:165675069-165675119	Caco-2	colon:	n/a
13	chr4:165770585-165770635	PFSK-1	brain:	n/a
14	chr4:165749663-165749713	HRE	kidney:	n/a
15	chr4:165735975-165736025	HCT-116	colon:	n/a
16	chr4:165675069-165675119	NH-A	brain:	n/a
17	chr4:165672394-165672444	GM12892	blood:	n/a
18	chr4:165675138-165675188	AG04450	lung:	fetal
19	chr4:165675138-165675188	HRPEpiC	eye:	n/a
20	chr4:165672394-165672444	ovcar-3	ovarian:	n/a
21	chr4:165672394-165672444	HRPEpiC	eye:	n/a
22	chr4:165672394-165672444	HUVEC	blood vessel:	n/a
23	chr4:165628435-165628485	HRPEpiC	eye:	n/a
24	chr4:165749663-165749713	Caco-2	colon:	n/a
25	chr4:165735975-165736025	NB4	blood:	n/a
26	chr4:165675069-165675119	HIPEpiC	eye:	n/a
27	chr4:165675138-165675188	HepG2	liver:	n/a
28	chr4:165675138-165675188	A549	lung:	n/a
29	chr4:165628435-165628485	Caco-2	colon:	n/a
30	chr4:165735975-165736025	GM12891	blood:	n/a
31	chr4:165675069-165675119	A549	lung:	n/a
32	chr4:165727888-165727938	Jurkat	blood:	n/a
33	chr4:165672394-165672444	GM06990	blood:	n/a
34	chr4:165749663-165749713	CMK	blood:	n/a
35	chr4:165672394-165672444	T-47D	breast:	n/a
36	chr4:165675138-165675188	GM06990	blood:	n/a
37	chr4:165749663-165749713	BE2_C	brain:	n/a
38	chr4:165735975-165736025	HRE	kidney:	n/a
39	chr4:165749663-165749713	HNPCEpiC	eye:	n/a
40	chr4:165735975-165736025	HAEpiC	amniotic membrane:	n/a
41	chr4:165749663-165749713	U87	brain:	n/a
42	chr4:165770585-165770635	BE2_C	brain:	n/a
43	chr4:165735975-165736025	Hela-S3	cervix:	n/a
44	chr4:165672394-165672444	AG04449	skin:	fetal
45	chr4:165672394-165672444	MCF10A-Er-Src	breast:	n/a
46	chr4:165770585-165770635	NT2-D1	testis:	n/a
47	chr4:165628435-165628485	Jurkat	blood:	n/a
48	chr4:165749663-165749713	SK-N-SH	brain:	n/a
49	chr4:165672394-165672444	BJ	skin:	n/a
50	chr4:165735975-165736025	MCF10A-Er-Src	breast:	n/a

(count:31 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:165621618..165622156-chr4:165652683..165653251,2	MCF-7	breast:
2	chr4:165698401..165701010-chr4:165876309..165878904,2	MCF-7	breast:
3	chr4:165772859..165774381-chr4:165791100..165793270,2	MCF-7	breast:
4	chr4:165694682..165697477-chr4:165698117..165700423,3	K562	blood:
5	chr4:165694682..165697477-chr4:165698117..165700423,3	K562	blood:
6	chr4:165605191..165606877-chr4:165609235..165611841,2	K562	blood:
7	chr4:165621618..165622156-chr4:165652683..165653251,2	MCF-7	breast:
8	chr4:165680979..165683517-chr4:165704780..165706574,2	K562	blood:
9	chr4:164469778..164470357-chr4:165652713..165653431,2	K562	blood:
10	chr4:165233147..165233701-chr4:165652735..165653337,3	MCF-7	breast:
11	chr4:165662552..165665240-chr4:165667378..165668885,2	K562	blood:
12	chr4:165662552..165665240-chr4:165667378..165668885,2	K562	blood:
13	chr4:164933482..164934510-chr4:165652809..165653538,3	MCF-7	breast:
14	chr4:165605191..165606877-chr4:165609235..165611841,2	K562	blood:
15	chr4:165232497..165233738-chr4:165652705..165653663,7	MCF-7	breast:
16	chr4:164406105..164406623-chr4:165652732..165653291,2	K562	blood:
17	chr4:165689047..165689634-chr4:165918458..165919146,2	MCF-7	breast:
18	chr4:165700661..165701216-chr4:165804953..165805488,2	MCF-7	breast:
19	chr4:164600035..164601052-chr4:165652771..165653814,4	MCF-7	breast:
20	chr4:165700977..165701537-chr4:165804617..165805893,3	MCF-7	breast:
21	chr4:165701014..165701543-chr4:165856051..165856573,2	MCF-7	breast:
22	chr4:165717917..165720004-chr4:165723969..165725996,2	MCF-7	breast:
23	chr4:164470993..164471692-chr4:165669595..165670148,2	MCF-7	breast:
24	chr4:165680979..165683517-chr4:165704780..165706574,2	K562	blood:
25	chr4:165700594..165701568-chr4:166017670..166018467,3	K562	blood:
26	chr2:164115997..164116846-chr4:165677534..165678338,2	MCF-7	breast:
27	chr4:165717917..165720004-chr4:165723969..165725996,2	MCF-7	breast:
28	chr4:165699281..165700032-chr4:165856272..165857241,2	MCF-7	breast:
29	chr4:165653445..165656901-chr4:165656969..165659019,3	MCF-7	breast:
30	chr4:164511732..164513794-chr4:165619563..165621990,2	K562	blood:
31	chr4:165653445..165656901-chr4:165656969..165659019,3	MCF-7	breast:

(count:14 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C4orf39-2	chr4:165675283-165675563	ENSG00000248771
2	lnc-C4orf39-2	chr4:165722243-165724947	ENSG00000248771
3	lnc-C4orf39-2	chr4:165675463-165675563	ENSG00000248771
4	lnc-C4orf39-2	chr4:165691571-165691707	ENSG00000248771
5	lnc-C4orf39-2	chr4:165691571-165691836	NONHSAT099075
6	lnc-C4orf39-2	chr4:165676874-165677139	FPKM1_group_24399_transcript_1
7	lnc-C4orf39-2	chr4:165691571-165691707	ENSG00000248771
8	lnc-C4orf39-2	chr4:165722243-165722606	ENSG00000248771
9	lnc-C4orf39-2	chr4:165675241-165675563	NONHSAT099075
10	lnc-C4orf39-2	chr4:165675216-165675327	ENSG00000248771
11	lnc-C4orf39-2	chr4:165722234-165723117	NONHSAT099078
12	lnc-C4orf39-2	chr4:165675241-165675563	FPKM1_group_24399_transcript_1
13	lnc-C4orf39-2	chr4:165718691-165718758	NONHSAT099078
14	lnc-C4orf39-7	chr4:165646462-165647858	NONHSAT099073

No data

Variant related genes	Relation type
RNU6-284P	TF binding region
RNU6-668P	TF binding region
ENSG00000248771	TF binding region
ENSG00000248162	TF binding region
RNU6-284P	CpG island
RNU6-668P	CpG island
ENSG00000248771	CpG island
ENSG00000248162	CpG island
ENSG00000250486	chromatin interactions

Extended variants
information (count: 5313 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:5313 , 50 per page) page: 1 2 3 4 5 6 7 ... 107

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs183966924	chr4:165533618-165533619	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs549648452	chr4:165533671-165533672	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs567572902	chr4:165533707-165533708	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs189632681	chr4:165533734-165533735	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs143430449	chr4:165533788-165533789	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs148011041	chr4:165533791-165533792	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs141699103	chr4:165533797-165533798	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs201666190	chr4:165533813-165533814	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs374255097	chr4:165533819-165533820	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs149482212	chr4:165533833-165533834	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs575526607	chr4:165533873-165533874	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs17045213	chr4:165533899-165533900	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs13117353	chr4:165533923-165533924	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs374161836	chr4:165533925-165533926	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs3035313	chr4:165533944-165533945	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs371376536	chr4:165533945-165533946	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs17045216	chr4:165533968-165533969	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs180775093	chr4:165533995-165533996	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs555610261	chr4:165534022-165534023	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs185817427	chr4:165534055-165534056	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs544540578	chr4:165534059-165534060	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs544489304	chr4:165534068-165534069	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs556575779	chr4:165534118-165534119	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs199540755	chr4:165534137-165534138	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs577985290	chr4:165534147-165534148	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs373441504	chr4:165534148-165534149	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs1406374	chr4:165534154-165534155	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs150536041	chr4:165534208-165534209	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs542770191	chr4:165534216-165534217	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs1406373	chr4:165534221-165534222	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs561159525	chr4:165534284-165534285	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs77403127	chr4:165534352-165534353	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs190444350	chr4:165534409-165534410	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs74644121	chr4:165534447-165534448	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs532837964	chr4:165534448-165534449	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs551362327	chr4:165534468-165534469	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs140964767	chr4:165534499-165534500	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs115164123	chr4:165534507-165534508	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs370515119	chr4:165534572-165534573	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs143170228	chr4:165534599-165534600	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs567498490	chr4:165534640-165534641	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs181832275	chr4:165534653-165534654	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs538123046	chr4:165534658-165534659	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs186104308	chr4:165534748-165534749	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs577967410	chr4:165534770-165534771	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs538609107	chr4:165534789-165534790	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs371430260	chr4:165534796-165534797	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs397766682	chr4:165534804-165534805	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs397803279	chr4:165534805-165534806	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs202060699	chr4:165534806-165534807	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:75)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	16272173	CNVD
Breast cancer	17133270	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Testicular germ cell tumor	18059402	CNVD
Ovarian cancer	22174824	CNVD
Olfactory neuroblastoma	18408657	CNVD
Breast cancer	21785460	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	21633010	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20581869	CNVD
Glioblastoma multiforme	22286061	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16750200	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Colorectal cancer	16774939	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Myelofibrosis	22110671	CNVD
intellectual deficit	22127048	CNVD
abnormal development	18461090	CNVD
Non-syndromic sensorineural hearing loss	19212409	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:493 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:165533600-165534600	Enhancers	Fetal Lung	lung
2	chr4:165534400-165535400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr4:165534600-165535000	Weak transcription	Fetal Lung	lung
4	chr4:165534800-165535600	Enhancers	Muscle Satellite Cultured Cells	--
5	chr4:165535000-165535200	Active TSS	Fetal Lung	lung
6	chr4:165535000-165535400	Enhancers	HSMMtube	muscle
7	chr4:165535000-165536800	Enhancers	HSMM	muscle
8	chr4:165535200-165535800	Flanking Active TSS	Fetal Lung	lung
9	chr4:165535200-165535800	Active TSS	Hela-S3	cervix
10	chr4:165535200-165536400	Enhancers	HMEC	breast
11	chr4:165535400-165535800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr4:165535400-165536200	Flanking Active TSS	HSMMtube	muscle
13	chr4:165535400-165537800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr4:165535800-165536600	Enhancers	Fetal Lung	lung
15	chr4:165536200-165536400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr4:165536200-165536600	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr4:165536200-165537200	Enhancers	HSMMtube	muscle
18	chr4:165536400-165537000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr4:165536400-165543000	Weak transcription	HMEC	breast
20	chr4:165536600-165537600	Weak transcription	Fetal Lung	lung
21	chr4:165536800-165538400	Weak transcription	HSMM	muscle
22	chr4:165537000-165537600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr4:165537600-165537800	Enhancers	Fetal Lung	lung
24	chr4:165537600-165543000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr4:165537800-165539600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr4:165538400-165538600	Enhancers	HSMM	muscle
27	chr4:165538600-165539000	Enhancers	Brain Inferior Temporal Lobe	brain
28	chr4:165538600-165539000	Weak transcription	HSMM	muscle
29	chr4:165538600-165539600	Enhancers	Brain Hippocampus Middle	brain
30	chr4:165538600-165540000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr4:165539000-165539400	Enhancers	HSMM	muscle
32	chr4:165542800-165543400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr4:165542800-165543600	Enhancers	Breast Myoepithelial Primary Cells	Breast
34	chr4:165542800-165543800	Enhancers	NHEK	skin
35	chr4:165543000-165543600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr4:165543000-165543600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
37	chr4:165543000-165544200	Enhancers	HMEC	breast
38	chr4:165543200-165543800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr4:165543200-165544400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr4:165544200-165544600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr4:165558600-165559600	Enhancers	ES-I3 Cell Line	embryonic stem cell
42	chr4:165559400-165559800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
43	chr4:165565800-165566400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr4:165567400-165567600	Enhancers	Muscle Satellite Cultured Cells	--
45	chr4:165568000-165569200	Weak transcription	Muscle Satellite Cultured Cells	--
46	chr4:165569200-165570800	Enhancers	Muscle Satellite Cultured Cells	--
47	chr4:165569600-165570400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr4:165569600-165570400	Enhancers	NHEK	skin
49	chr4:165569600-165570600	Enhancers	HMEC	breast
50	chr4:165569600-165570600	Enhancers	NH-A	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links