Variant report

Variant nsv598095
Chromosome Location chr5:49462228-49536268
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:179 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:49458000-49464400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
2 chr5:49458200-49464400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
3 chr5:49460200-49464400 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
4 chr5:49460400-49464200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr5:49461200-49464400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
6 chr5:49461600-49462600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
7 chr5:49463800-49464200 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
8 chr5:49463800-49464400 ZNF genes & repeats Liver Liver
9 chr5:49463800-49464600 ZNF genes & repeats HUVEC blood vessel
10 chr5:49464000-49464200 ZNF genes & repeats Duodenum Mucosa Duodenum
11 chr5:49464600-49465400 Weak transcription HUVEC blood vessel
12 chr5:49469400-49473000 Weak transcription HUVEC blood vessel
13 chr5:49470200-49471000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
14 chr5:49470400-49493600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr5:49470600-49473000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
16 chr5:49471000-49476800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
17 chr5:49471000-49486200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
18 chr5:49471000-49517600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
19 chr5:49471800-49473000 ZNF genes & repeats HepG2 liver
20 chr5:49473000-49473400 ZNF genes & repeats HUVEC blood vessel
21 chr5:49474200-49486400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
22 chr5:49475400-49478200 ZNF genes & repeats Dnd41 blood
23 chr5:49476400-49476600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
24 chr5:49477000-49482400 ZNF genes & repeats Primary T cells from cord blood blood
25 chr5:49478200-49479600 Enhancers Dnd41 blood
26 chr5:49481000-49481400 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:49481200-49486200 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
28 chr5:49481400-49482200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr5:49482200-49482600 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr5:49482200-49482600 ZNF genes & repeats HUVEC blood vessel
31 chr5:49482200-49482600 ZNF genes & repeats NH-A brain
32 chr5:49483600-49485200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
33 chr5:49484200-49485200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
34 chr5:49484600-49485000 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr5:49484600-49485000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr5:49484600-49485000 ZNF genes & repeats Primary T helper memory cells from peripheral blood 2 blood
37 chr5:49484600-49485000 ZNF genes & repeats Brain Dorsolateral Prefrontal Cortex brain
38 chr5:49484600-49485000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
39 chr5:49484600-49485000 ZNF genes & repeats Fetal Heart heart
40 chr5:49484800-49485000 ZNF genes & repeats H1 Cell Line embryonic stem cell
41 chr5:49484800-49485000 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
42 chr5:49484800-49485000 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
43 chr5:49484800-49485000 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
44 chr5:49484800-49485000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
45 chr5:49484800-49485000 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
46 chr5:49484800-49485000 ZNF genes & repeats Brain Anterior Caudate brain
47 chr5:49484800-49485000 ZNF genes & repeats Brain Hippocampus Middle brain
48 chr5:49484800-49485000 ZNF genes & repeats Brain Inferior Temporal Lobe brain
49 chr5:49484800-49485000 ZNF genes & repeats Colon Smooth Muscle Colon
50 chr5:49484800-49485000 ZNF genes & repeats NH-A brain

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