Variant report

Variant nsv598105
Chromosome Location chr5:49503299-49547088
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:150 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:49471000-49517600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
2 chr5:49490200-49514600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
3 chr5:49495800-49517800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr5:49505600-49514600 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
5 chr5:49507000-49511000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
6 chr5:49507200-49508200 ZNF genes & repeats Liver Liver
7 chr5:49510000-49513600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr5:49510800-49511600 Enhancers Dnd41 blood
9 chr5:49511600-49512000 ZNF genes & repeats HUVEC blood vessel
10 chr5:49512400-49516400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
11 chr5:49513200-49514200 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr5:49513200-49514200 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr5:49513200-49514400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
14 chr5:49513400-49513800 Active TSS Psoas Muscle Psoas
15 chr5:49513400-49514000 ZNF genes & repeats Primary hematopoietic stem cells blood
16 chr5:49513400-49514000 ZNF genes & repeats Primary T helper memory cells from peripheral blood 2 blood
17 chr5:49513400-49514000 ZNF genes & repeats Left Ventricle heart
18 chr5:49513400-49515000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
19 chr5:49513400-49515400 ZNF genes & repeats Liver Liver
20 chr5:49513600-49513800 ZNF genes & repeats H1 Cell Line embryonic stem cell
21 chr5:49513600-49513800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
22 chr5:49513600-49513800 Active TSS Aorta Aorta
23 chr5:49513600-49514000 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
24 chr5:49513600-49514000 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr5:49513600-49514000 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr5:49513600-49514000 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
27 chr5:49513600-49514000 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
28 chr5:49513600-49514000 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
29 chr5:49513600-49514000 ZNF genes & repeats Fetal Kidney kidney
30 chr5:49513600-49514800 ZNF genes & repeats Primary T cells from cord blood blood
31 chr5:49513600-49514800 ZNF genes & repeats Adipose Nuclei Adipose
32 chr5:49513800-49514000 Flanking Active TSS Aorta Aorta
33 chr5:49513800-49514000 ZNF genes & repeats Psoas Muscle Psoas
34 chr5:49513800-49514000 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
35 chr5:49514000-49517000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr5:49514000-49517000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr5:49514000-49517200 Weak transcription Psoas Muscle Psoas
38 chr5:49516400-49517400 ZNF genes & repeats HepG2 liver
39 chr5:49516800-49517600 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
40 chr5:49517000-49517200 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr5:49517000-49517200 Active TSS Primary T helper naive cells from peripheral blood blood
42 chr5:49517000-49517200 ZNF genes & repeats Muscle Satellite Cultured Cells --
43 chr5:49517000-49517200 ZNF genes & repeats GM12878-XiMat blood
44 chr5:49517000-49517200 ZNF genes & repeats HSMMtube muscle
45 chr5:49517000-49517400 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
46 chr5:49517000-49517600 ZNF genes & repeats HUVEC blood vessel
47 chr5:49517000-49517800 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr5:49517200-49517400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
49 chr5:49517200-49517400 ZNF genes & repeats Psoas Muscle Psoas
50 chr5:49517400-49518400 Weak transcription Psoas Muscle Psoas

Quick Search:


  
Input of quick search could be:

what's new

Quick links