Variant report

Variant nsv598254
Chromosome Location chr5:58715782-58923601
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:2835 , 50 per page) page: 1 2 3 4 5 6 7 ... 57
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:58705600-58751400 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr5:58708600-58718200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr5:58709800-58756800 Weak transcription Aorta Aorta
4 chr5:58712400-58719600 Weak transcription Psoas Muscle Psoas
5 chr5:58712600-58717800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr5:58712600-58718000 Weak transcription Fetal Lung lung
7 chr5:58714200-58716000 Enhancers Rectal Mucosa Donor 31 rectum
8 chr5:58714200-58718200 Weak transcription Fetal Brain Female brain
9 chr5:58714600-58718000 Weak transcription Fetal Heart heart
10 chr5:58714800-58715800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr5:58714800-58731000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr5:58715000-58716000 Weak transcription Colon Smooth Muscle Colon
13 chr5:58715200-58717800 Weak transcription Duodenum Mucosa Duodenum
14 chr5:58715400-58718000 Strong transcription A549 lung
15 chr5:58715400-58718400 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr5:58715600-58716800 ZNF genes & repeats Fetal Intestine Small intestine
17 chr5:58715800-58718400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr5:58716000-58716200 Enhancers Colon Smooth Muscle Colon
19 chr5:58716000-58756600 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr5:58716200-58716800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr5:58716200-58722800 Weak transcription Colon Smooth Muscle Colon
22 chr5:58716600-58717000 Enhancers Fetal Brain Male brain
23 chr5:58716800-58717000 Weak transcription Fetal Intestine Small intestine
24 chr5:58717000-58719200 Weak transcription Fetal Brain Male brain
25 chr5:58717000-58719400 Enhancers Fetal Intestine Small intestine
26 chr5:58717400-58719800 Enhancers Fetal Intestine Large intestine
27 chr5:58717800-58718200 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr5:58717800-58718200 Enhancers Sigmoid Colon Sigmoid Colon
29 chr5:58717800-58718400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr5:58717800-58718600 Enhancers HUES48 Cell Line embryonic stem cell
31 chr5:58717800-58719400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr5:58717800-58719600 Enhancers Duodenum Mucosa Duodenum
33 chr5:58718000-58718200 Enhancers Duodenum Smooth Muscle Duodenum
34 chr5:58718000-58718200 Genic enhancers A549 lung
35 chr5:58718000-58718400 Enhancers Small Intestine intestine
36 chr5:58718000-58718600 Enhancers HUES64 Cell Line embryonic stem cell
37 chr5:58718000-58718600 Enhancers iPS-20b Cell Line embryonic stem cell
38 chr5:58718000-58719200 Enhancers Fetal Heart heart
39 chr5:58718000-58719200 Enhancers Fetal Lung lung
40 chr5:58718000-58720000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr5:58718200-58718400 Enhancers Fetal Brain Female brain
42 chr5:58718200-58718400 Strong transcription A549 lung
43 chr5:58718200-58718600 Enhancers HUES6 Cell Line embryonic stem cell
44 chr5:58718200-58719400 Enhancers Pancreatic Islets Pancreatic Islet
45 chr5:58718200-58719400 Weak transcription HSMMtube muscle
46 chr5:58718200-58719800 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr5:58718400-58718800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr5:58718400-58718800 Weak transcription A549 lung
49 chr5:58718400-58719000 Weak transcription Fetal Brain Female brain
50 chr5:58718400-58720600 Enhancers Skeletal Muscle Male skeletal muscle

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