Variant report

Variant nsv600496
Chromosome Location chr5:178552518-178752351
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:3550 , 50 per page) page: 1 2 3 4 5 6 7 ... 71
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178527800-178559800 Weak transcription HSMM muscle
2 chr5:178538000-178560400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr5:178538200-178564600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr5:178545000-178555000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
5 chr5:178545800-178552800 ZNF genes & repeats Fetal Stomach stomach
6 chr5:178546000-178554000 Weak transcription HSMMtube muscle
7 chr5:178546800-178563200 Strong transcription Adipose Nuclei Adipose
8 chr5:178547000-178565400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr5:178547400-178560200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr5:178547600-178552800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin02 Skin
11 chr5:178547600-178552800 ZNF genes & repeats Spleen Spleen
12 chr5:178547600-178560200 Strong transcription Placenta Amnion Placenta Amnion
13 chr5:178547800-178560400 Strong transcription Ovary ovary
14 chr5:178548000-178559800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr5:178548200-178554800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
16 chr5:178548600-178570000 Weak transcription NHDF-Ad bronchial
17 chr5:178549000-178553600 Weak transcription Muscle Satellite Cultured Cells --
18 chr5:178549400-178557000 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr5:178549400-178590800 Weak transcription Stomach Smooth Muscle stomach
20 chr5:178549600-178553600 ZNF genes & repeats Gastric stomach
21 chr5:178549600-178567400 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr5:178550200-178556200 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr5:178550400-178565600 Weak transcription Esophagus oesophagus
24 chr5:178550800-178559600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr5:178551200-178553800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
26 chr5:178551200-178555800 Weak transcription Fetal Muscle Leg muscle
27 chr5:178551200-178560200 Weak transcription Fetal Intestine Small intestine
28 chr5:178551400-178553000 Strong transcription NHLF lung
29 chr5:178551400-178554400 Weak transcription Fetal Muscle Trunk muscle
30 chr5:178551400-178559400 Weak transcription Fetal Lung lung
31 chr5:178551400-178559400 Strong transcription Osteobl bone
32 chr5:178551600-178582800 Weak transcription Right Atrium heart
33 chr5:178552000-178552800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
34 chr5:178552000-178553800 ZNF genes & repeats Lung lung
35 chr5:178552000-178556800 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
36 chr5:178552800-178553600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr5:178552800-178554200 Strong transcription Spleen Spleen
38 chr5:178552800-178559600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr5:178552800-178559800 Weak transcription Right Ventricle heart
40 chr5:178552800-178566800 Strong transcription Fetal Stomach stomach
41 chr5:178553000-178553800 Weak transcription NHLF lung
42 chr5:178553600-178553800 ZNF genes & repeats Liver Liver
43 chr5:178553600-178554000 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin02 Skin
44 chr5:178553600-178556000 Weak transcription Gastric stomach
45 chr5:178553600-178559600 Strong transcription Muscle Satellite Cultured Cells --
46 chr5:178553800-178554600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr5:178553800-178554800 Weak transcription Aorta Aorta
48 chr5:178553800-178560000 Strong transcription NHLF lung
49 chr5:178553800-178569000 Weak transcription Liver Liver
50 chr5:178554000-178556600 Strong transcription HSMMtube muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links