Variant report

Variant nsv600658
Chromosome Location chr5:178921861-178950814
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:150 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178913800-178935200 Weak transcription Right Atrium heart
2 chr5:178918400-178925400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr5:178921600-178922200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:178921800-178922000 Bivalent/Poised TSS Fetal Lung lung
5 chr5:178921800-178922000 Enhancers Spleen Spleen
6 chr5:178921800-178922200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr5:178921800-178922200 ZNF genes & repeats Fetal Kidney kidney
8 chr5:178921800-178922200 ZNF genes & repeats Pancreas Pancrea
9 chr5:178922000-178922200 Bivalent Enhancer Fetal Brain Male brain
10 chr5:178922000-178922200 Enhancers Gastric stomach
11 chr5:178922000-178922400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr5:178922000-178923000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
13 chr5:178922000-178925200 Weak transcription Spleen Spleen
14 chr5:178922200-178931400 Weak transcription Pancreas Pancrea
15 chr5:178922600-178922800 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
16 chr5:178923000-178923200 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
17 chr5:178923000-178923600 Enhancers Fetal Brain Female brain
18 chr5:178923600-178923800 Bivalent Enhancer HepG2 liver
19 chr5:178923600-178924800 Weak transcription Fetal Brain Female brain
20 chr5:178924200-178925200 Enhancers Fetal Brain Male brain
21 chr5:178924600-178925000 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
22 chr5:178924600-178925400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr5:178924600-178925600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr5:178924800-178925200 Enhancers Brain Germinal Matrix brain
25 chr5:178924800-178925200 Bivalent Enhancer Fetal Stomach stomach
26 chr5:178924800-178925200 Bivalent Enhancer HepG2 liver
27 chr5:178924800-178925400 Enhancers Fetal Muscle Leg muscle
28 chr5:178924800-178925600 Enhancers Fetal Brain Female brain
29 chr5:178924800-178925600 Bivalent Enhancer Fetal Muscle Trunk muscle
30 chr5:178924800-178925600 Enhancers NHDF-Ad bronchial
31 chr5:178925000-178925400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr5:178925000-178925600 Enhancers Adipose Nuclei Adipose
33 chr5:178925200-178925600 Active TSS Spleen Spleen
34 chr5:178925400-178925600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
35 chr5:178925400-178925800 Enhancers Esophagus oesophagus
36 chr5:178925600-178935000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr5:178926200-178926400 Enhancers Esophagus oesophagus
38 chr5:178926200-178926400 Enhancers Fetal Stomach stomach
39 chr5:178928600-178931400 Weak transcription Fetal Stomach stomach
40 chr5:178931200-178931400 Enhancers HepG2 liver
41 chr5:178931200-178932400 Enhancers Liver Liver
42 chr5:178931200-178932800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr5:178931400-178931600 Enhancers Fetal Stomach stomach
44 chr5:178931400-178931600 Enhancers Pancreas Pancrea
45 chr5:178931400-178931800 Enhancers Fetal Kidney kidney
46 chr5:178931400-178932800 Flanking Active TSS HepG2 liver
47 chr5:178931600-178931800 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
48 chr5:178931600-178931800 Enhancers Fetal Lung lung
49 chr5:178931600-178932000 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr5:178931600-178932200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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