Variant report

Variant nsv600670
Chromosome Location chr5:180047412-180063743
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:167 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180040000-180061200 Weak transcription Gastric stomach
2 chr5:180046000-180047600 Strong transcription Lung lung
3 chr5:180046000-180049600 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr5:180046000-180050200 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr5:180046200-180071800 Weak transcription Liver Liver
6 chr5:180046400-180049800 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr5:180046400-180050000 Weak transcription Primary T cells from cord blood blood
8 chr5:180046400-180050600 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr5:180046400-180051400 Weak transcription Primary hematopoietic stem cells blood
10 chr5:180046400-180072200 Weak transcription Right Atrium heart
11 chr5:180046600-180049200 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr5:180046800-180047800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr5:180046800-180048800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
14 chr5:180046800-180050200 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr5:180046800-180050600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr5:180046800-180059600 Weak transcription Pancreas Pancrea
17 chr5:180047000-180047800 Strong transcription Spleen Spleen
18 chr5:180047000-180048800 Bivalent Enhancer Placenta Placenta
19 chr5:180047600-180048400 Weak transcription Lung lung
20 chr5:180047800-180048000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr5:180047800-180048000 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
22 chr5:180047800-180048800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
23 chr5:180047800-180048800 ZNF genes & repeats Spleen Spleen
24 chr5:180048000-180048400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr5:180048400-180048800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr5:180048400-180048800 Strong transcription Lung lung
27 chr5:180048800-180049600 Weak transcription Lung lung
28 chr5:180048800-180049800 Weak transcription Spleen Spleen
29 chr5:180048800-180050200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr5:180048800-180050400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr5:180048800-180052200 Enhancers Placenta Placenta
32 chr5:180049200-180051200 Enhancers Primary T helper cells PMA-I stimulated --
33 chr5:180049200-180051600 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr5:180049600-180049800 Enhancers Lung lung
35 chr5:180049600-180051200 Enhancers Primary T killer naive cells fromperipheralblood blood
36 chr5:180049600-180051800 Enhancers Primary T cells fromperipheralblood blood
37 chr5:180049800-180050800 Genic enhancers Lung lung
38 chr5:180049800-180051200 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr5:180049800-180051600 Enhancers Fetal Muscle Trunk muscle
40 chr5:180049800-180051800 Enhancers Spleen Spleen
41 chr5:180050000-180050800 Enhancers Primary neutrophils fromperipheralblood blood
42 chr5:180050000-180050800 Enhancers Dnd41 blood
43 chr5:180050000-180051000 Enhancers Primary T cells from cord blood blood
44 chr5:180050000-180051200 Enhancers HUVEC blood vessel
45 chr5:180050000-180051600 Enhancers Skeletal Muscle Male skeletal muscle
46 chr5:180050000-180051800 Enhancers Fetal Muscle Leg muscle
47 chr5:180050000-180051800 Enhancers Left Ventricle heart
48 chr5:180050000-180052800 Enhancers Adipose Nuclei Adipose
49 chr5:180050000-180052800 Enhancers Right Ventricle heart
50 chr5:180050200-180050800 Enhancers Primary T regulatory cells fromperipheralblood blood

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