Variant report

Variant	nsv600860
Chromosome Location	chr6:4052383-4096678
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:641)
CpG islands
(count:857)
Chromatin interactive
region (count:49)
LncRNA
region (count:36)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:641 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:4055694-4056061	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:4059355-4059765	K562	blood:	n/a	n/a
3	ARID3A	chr6:4055679-4056030	K562	blood:	n/a	n/a
4	BACH1	chr6:4079362-4079553	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr6:4078964-4079020	H1-hESC	embryonic stem cell:	n/a	n/a
6	BHLHE40	chr6:4055726-4055996	K562	blood:	n/a	n/a
7	BRCA1	chr6:4096212-4096223	HepG2	liver:	n/a	n/a
8	CCNT2	chr6:4055675-4055905	K562	blood:	n/a	n/a
9	CEBPB	chr6:4069441-4069745	HepG2	liver:	n/a	n/a
10	CEBPB	chr6:4068568-4068875	IMR90	lung:	n/a	chr6:4068718-4068729
11	CEBPB	chr6:4066738-4066995	HepG2	liver:	n/a	n/a
12	CEBPB	chr6:4068557-4068882	HepG2	liver:	n/a	chr6:4068718-4068729
13	CEBPB	chr6:4091798-4092099	K562	blood:	n/a	chr6:4091925-4091938 chr6:4091925-4091936 chr6:4091927-4091938 chr6:4091925-4091938
14	CEBPB	chr6:4055713-4055854	A549	lung:	n/a	n/a
15	CEBPB	chr6:4068631-4068831	A549	lung:	n/a	chr6:4068718-4068729
16	CEBPB	chr6:4078638-4078736	HepG2	liver:	n/a	n/a
17	CEBPB	chr6:4068590-4068831	Hela-S3	cervix:	n/a	chr6:4068718-4068729
18	CEBPB	chr6:4069395-4069800	K562	blood:	n/a	n/a
19	CEBPB	chr6:4091821-4092015	HepG2	liver:	n/a	chr6:4091925-4091938 chr6:4091925-4091936 chr6:4091927-4091938 chr6:4091925-4091938
20	CEBPB	chr6:4068532-4068894	K562	blood:	n/a	chr6:4068718-4068729
21	CEBPB	chr6:4091753-4092091	HepG2	liver:	n/a	chr6:4091925-4091938 chr6:4091925-4091936 chr6:4091927-4091938 chr6:4091925-4091938
22	CTCF	chr6:4055764-4055969	HepG2	liver:	n/a	chr6:4055887-4055908
23	CTCF	chr6:4055816-4055962	Spleen_OC	spleen:	n/a	chr6:4055887-4055908
24	CTCF	chr6:4055732-4055991	A549	lung:	n/a	chr6:4055887-4055908
25	CTCF	chr6:4055820-4055970	HPAF	blood vessel:	n/a	chr6:4055887-4055908
26	CTCF	chr6:4059440-4059590	Hela-S3	cervix:	n/a	n/a
27	CTCF	chr6:4059460-4059610	SAEC	small airway:	n/a	n/a
28	CTCF	chr6:4055800-4056022	A549	lung:	n/a	chr6:4055887-4055908
29	CTCF	chr6:4059440-4059590	HCPEpiC	choroid plexus:	n/a	n/a
30	CTCF	chr6:4071170-4071200	H1-hESC	embryonic stem cell:	n/a	n/a
31	CTCF	chr6:4059392-4059633	K562	blood:	n/a	n/a
32	CTCF	chr6:4055780-4055930	Hela-S3	cervix:	n/a	chr6:4055887-4055908
33	CTCF	chr6:4055820-4055970	HEK293	kidney:	n/a	chr6:4055887-4055908
34	CTCF	chr6:4055800-4055950	HFF	foreskin:	n/a	chr6:4055887-4055908
35	CTCF	chr6:4059332-4059700	IMR90	lung:	n/a	n/a
36	CTCF	chr6:4055800-4055950	HEEpiC	esophagus:	n/a	chr6:4055887-4055908
37	CTCF	chr6:4055840-4055990	HMF	breast:	n/a	chr6:4055887-4055908
38	CTCF	chr6:4055760-4055910	HCM	heart:	n/a	chr6:4055887-4055908
39	CTCF	chr6:4055802-4055964	Kidney_OC	kidney:	n/a	chr6:4055887-4055908
40	CTCF	chr6:4055880-4056030	RPTEC	kidney:	n/a	chr6:4055887-4055908
41	CTCF	chr6:4055840-4055990	GM12873	blood:	n/a	chr6:4055887-4055908
42	CTCF	chr6:4059420-4059570	HBMEC	blood vessel:	n/a	n/a
43	CTCF	chr6:4055840-4055990	Hela-S3	cervix:	n/a	chr6:4055887-4055908
44	CTCF	chr6:4055740-4055890	WERI-Rb-1	eye:	n/a	n/a
45	CTCF	chr6:4055822-4055913	MCF-7	breast:	n/a	chr6:4055887-4055908
46	CTCF	chr6:4055840-4055990	HEEpiC	esophagus:	n/a	chr6:4055887-4055908
47	CTCF	chr6:4059440-4059590	NB4	blood:	n/a	n/a
48	CTCF	chr6:4059460-4059610	HUVEC	blood vessel:	n/a	n/a
49	CTCF	chr6:4055830-4055923	GM13976	blood:	n/a	chr6:4055887-4055908
50	CTCF	chr6:4059440-4059590	AG09309	skin:	n/a	n/a

(count:857 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:4082055-4082105	HNPCEpiC	eye:	n/a
2	chr6:4079704-4079754	Hela-S3	cervix:	n/a
3	chr6:4056654-4056704	HRCEpiC	kidney:	n/a
4	chr6:4082055-4082105	HNPCEpiC	eye:	n/a
5	chr6:4079704-4079754	Hela-S3	cervix:	n/a
6	chr6:4056654-4056704	HRCEpiC	kidney:	n/a
7	chr6:4056654-4056704	HRPEpiC	eye:	n/a
8	chr6:4090480-4090530	IMR90	lung:	fetal
9	chr6:4079342-4079392	NB4	blood:	n/a
10	chr6:4079350-4079400	HIPEpiC	eye:	n/a
11	chr6:4078959-4079009	HEK293	kidney:	embryo
12	chr6:4082055-4082105	HRCEpiC	kidney:	n/a
13	chr6:4082055-4082105	HAEpiC	amniotic membrane:	n/a
14	chr6:4078943-4078993	HAEpiC	amniotic membrane:	n/a
15	chr6:4056654-4056704	HCF	heart:	n/a
16	chr6:4078943-4078993	ProgFib	skin:	n/a
17	chr6:4078970-4079020	HCF	heart:	n/a
18	chr6:4079350-4079400	HEK293	kidney:	embryo
19	chr6:4078959-4079009	Hepatocyte	liver:	n/a
20	chr6:4079342-4079392	NHBE	bronchial:	n/a
21	chr6:4078943-4078993	SKMC	muscle:	n/a
22	chr6:4079704-4079754	A549	lung:	n/a
23	chr6:4078959-4079009	T-47D	breast:	n/a
24	chr6:4078959-4079009	GM12892	blood:	n/a
25	chr6:4079534-4079584	SKMC	muscle:	n/a
26	chr6:4078943-4078993	HEK293	kidney:	embryo
27	chr6:4056654-4056704	ProgFib	skin:	n/a
28	chr6:4078970-4079020	HL-60	blood:	n/a
29	chr6:4078970-4079020	AoSMC	blood vessel:	n/a
30	chr6:4062956-4063006	GM12878	blood:	n/a
31	chr6:4078970-4079020	NB4	blood:	n/a
32	chr6:4078959-4079009	Jurkat	blood:	n/a
33	chr6:4079528-4079578	T-47D	breast:	n/a
34	chr6:4079528-4079578	ECC-1	luminal epithelium:	n/a
35	chr6:4079649-4079699	H1-hESC	embryonic stem cell:	embryo
36	chr6:4082055-4082105	ECC-1	luminal epithelium:	n/a
37	chr6:4079572-4079622	HAEpiC	amniotic membrane:	n/a
38	chr6:4078943-4078993	HCM	heart:	n/a
39	chr6:4090480-4090530	PFSK-1	brain:	n/a
40	chr6:4090480-4090530	HIPEpiC	eye:	n/a
41	chr6:4079704-4079754	HUVEC	blood vessel:	n/a
42	chr6:4079649-4079699	GM19239	blood:	n/a
43	chr6:4079704-4079754	GM06990	blood:	n/a
44	chr6:4079534-4079584	HEEpiC	esophagus:	n/a
45	chr6:4062956-4063006	AG09309	skin:	n/a
46	chr6:4079572-4079622	Hela-S3	cervix:	n/a
47	chr6:4056654-4056704	RPTEC	kidney:	n/a
48	chr6:4079534-4079584	Hela-S3	cervix:	n/a
49	chr6:4082055-4082105	HRPEpiC	eye:	n/a
50	chr6:4056654-4056704	HEEpiC	esophagus:	n/a

(count:49 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:4040955..4045707-chr6:4056854..4061183,4	K562	blood:
2	chr6:4067620..4070166-chr6:4130566..4132778,2	K562	blood:
3	chr6:4049234..4051295-chr6:4063224..4065209,2	MCF-7	breast:
4	chr6:4055133..4057638-chr6:4068156..4070226,2	K562	blood:
5	chr6:4060216..4062981-chr6:4075030..4077501,2	K562	blood:
6	chr6:4067254..4070253-chr6:4071525..4075483,4	K562	blood:
7	chr6:4046276..4049820-chr6:4052310..4055937,3	K562	blood:
8	chr6:4082801..4085618-chr6:4088964..4091515,2	MCF-7	breast:
9	chr6:4038778..4041215-chr6:4053376..4056511,3	K562	blood:
10	chr6:4038415..4040524-chr6:4062857..4065779,3	K562	blood:
11	chr6:4061052..4063122-chr6:4065712..4067920,2	K562	blood:
12	chr6:4040702..4042424-chr6:4053690..4055352,2	MCF-7	breast:
13	chr6:4019656..4024130-chr6:4049502..4053557,5	K562	blood:
14	chr6:4061684..4064078-chr6:4064643..4066598,2	MCF-7	breast:
15	chr6:4049071..4052432-chr6:4060927..4063181,3	K562	blood:
16	chr6:4063481..4065487-chr6:4065794..4068948,3	K562	blood:
17	chr6:4063868..4065487-chr6:4067448..4070082,2	K562	blood:
18	chr6:4064462..4068135-chr6:4134400..4138606,5	K562	blood:
19	chr6:4079145..4082085-chr6:4082905..4085226,2	K562	blood:
20	chr6:4040955..4043384-chr6:4055982..4058354,2	K562	blood:
21	chr6:4076386..4078865-chr6:4079874..4083762,3	K562	blood:
22	chr6:4049071..4052432-chr6:4060927..4063181,3	K562	blood:
23	chr6:4091213..4093295-chr6:4098228..4099791,2	K562	blood:
24	chr6:4054760..4058464-chr6:4059155..4063115,3	K562	blood:
25	chr6:4063481..4065487-chr6:4065794..4068948,3	K562	blood:
26	chr6:4060216..4062981-chr6:4075030..4077501,2	K562	blood:
27	chr6:4064462..4067328-chr6:4134319..4137285,4	K562	blood:
28	chr6:4073031..4076036-chr6:4129401..4132460,3	K562	blood:
29	chr6:4055445..4056340-chr6:4155713..4156846,7	MCF-7	breast:
30	chr6:4020118..4023028-chr6:4056131..4059224,3	K562	blood:
31	chr6:4020118..4022120-chr6:4056131..4059470,3	K562	blood:
32	chr6:4063868..4065487-chr6:4067448..4070082,2	K562	blood:
33	chr6:4082801..4085618-chr6:4088964..4091515,2	MCF-7	breast:
34	chr6:4063923..4066758-chr6:4130890..4132765,2	K562	blood:
35	chr6:4055416..4056150-chr6:4210745..4211284,2	MCF-7	breast:
36	chr6:4016440..4019187-chr6:4054276..4058013,4	K562	blood:
37	chr6:4050182..4052432-chr6:4060847..4064150,3	K562	blood:
38	chr6:4063965..4066148-chr6:4066336..4068654,2	MCF-7	breast:
39	chr6:4050759..4052710-chr6:4054373..4057120,2	K562	blood:
40	chr6:4067254..4070253-chr6:4071525..4075483,4	K562	blood:
41	chr6:4076097..4078865-chr6:4081964..4083762,3	K562	blood:
42	chr6:4063965..4066148-chr6:4066336..4068654,2	MCF-7	breast:
43	chr6:4056059..4057941-chr6:4133460..4135296,2	K562	blood:
44	chr6:4054760..4058464-chr6:4059155..4063115,3	K562	blood:
45	chr6:4057382..4058933-chr6:4121513..4123123,2	K562	blood:
46	chr6:4073171..4075702-chr6:4076261..4078769,2	K562	blood:
47	chr6:4066739..4069378-chr6:4083684..4085264,2	MCF-7	breast:
48	chr6:4066739..4069378-chr6:4083684..4085264,2	MCF-7	breast:
49	chr6:4050182..4052432-chr6:4060847..4064150,3	K562	blood:

(count:36 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C6orf201-4	chr6:4081305-4081481	ucscGeneNc_uc003mwg_1
2	lnc-C6orf146-4	chr6:4087244-4087566	NONHSAT147378
3	lnc-C6orf201-4	chr6:4093800-4094025	NONHSAT107303
4	lnc-C6orf201-4	chr6:4087631-4087960	NONHSAT107297
5	lnc-C6orf146-4	chr6:4073509-4073576	NONHSAT147378
6	lnc-C6orf201-4	chr6:4093241-4093429	NONHSAT107302
7	lnc-C6orf201-4	chr6:4094573-4095655	NONHSAT107303
8	lnc-PRPF4B-1	chr6:4065035-4065217	NONHSAT107287
9	lnc-C6orf201-4	chr6:4093965-4094025	NONHSAT107301
10	lnc-C6orf201-4	chr6:4082594-4082635	ucscGeneNc_uc003mwg_1
11	lnc-PRPF4B-1	chr6:4062791-4062994	NONHSAT107287
12	lnc-C6orf201-4	chr6:4093241-4093429	NONHSAT107301
13	lnc-ECI2-6	chr6:4079086-4079455	NONHSAT107292
14	lnc-C6orf146-5	chr6:4088238-4088519	NONHSAT107299
15	lnc-PRPF4B-1	chr6:4063308-4063353	NONHSAT107287
16	lnc-ECI2-5	chr6:4078218-4078499	NONHSAT107295
17	lnc-C6orf201-4	chr6:4094485-4095655	NONHSAT107302
18	lnc-PRPF4B-1	chr6:4062338-4062533	NONHSAT107287
19	lnc-C6orf201-6	chr6:4061168-4061318	NONHSAT107282
20	lnc-C6orf201-4	chr6:4094573-4095655	NONHSAT107301
21	lnc-ECI2-7	chr6:4066655-4066859	NONHSAT107291
22	lnc-C6orf201-4	chr6:4079440-4079914	NR_104464
23	lnc-C6orf201-4	chr6:4076360-4079955	NONHSAT107293
24	lnc-C6orf201-6	chr6:4060939-4061002	NONHSAT107282
25	lnc-PRPF4B-1	chr6:4065035-4065205	NONHSAT107288
26	lnc-ECI2-6	chr6:4077589-4077682	NONHSAT107292
27	lnc-PRPF4B-1	chr6:4065035-4065206	NONHSAT107289
28	lnc-C6orf201-6	chr6:4061216-4061381	NONHSAT107284
29	lnc-C6orf201-6	chr6:4061889-4062303	NONHSAT107284
30	lnc-C6orf201-4	chr6:4093241-4093429	NONHSAT107303
31	lnc-PRPF4B-1	chr6:4063308-4063353	NONHSAT107288
32	lnc-ECI2-6	chr6:4073692-4073741	NONHSAT107292
33	lnc-PRPF4B-1	chr6:4062876-4063353	NONHSAT107289
34	lnc-PRPF4B-1	chr6:4062762-4062867	NONHSAT107288
35	lnc-ECI2-6	chr6:4074811-4074895	NONHSAT107292
36	lnc-C6orf201-4	chr6:4094055-4094905	NONHSAT107304

No data

Variant related genes	Relation type
PRPF4B	TF binding region
C6orf201	TF binding region
FAM217A	TF binding region
ENSG00000252668	TF binding region
PRPF4B	CpG island
C6orf201	CpG island
FAM217A	CpG island
ENSG00000252668	CpG island
ENSG00000185689	chromatin interactions
ENSG00000145975	chromatin interactions
ENSG00000252668	chromatin interactions
ENSG00000112739	chromatin interactions
ENSG00000230648	chromatin interactions
ENSG00000198721	chromatin interactions
ENSG00000272248	chromatin interactions
ENSG00000234817	chromatin interactions
ENSG00000254821	chromatin interactions

Extended variants
information (count: 1745 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:1745 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3747762	chr6:4052383-4052384	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs180855334	chr6:4052394-4052395	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs3833454	chr6:4052458-4052459	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs397748043	chr6:4052463-4052464	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs201121836	chr6:4052464-4052465	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs202077416	chr6:4052466-4052467	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs370217434	chr6:4052487-4052488	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs35903942	chr6:4052488-4052489	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs551048052	chr6:4052495-4052496	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs72308604	chr6:4052505-4052506	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs71001552	chr6:4052513-4052514	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs3833455	chr6:4052542-4052543	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs530684791	chr6:4052548-4052549	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs3747763	chr6:4052552-4052553	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs374379500	chr6:4052574-4052575	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs560751630	chr6:4052620-4052621	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs527882349	chr6:4052623-4052624	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs567201566	chr6:4052693-4052694	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs111290245	chr6:4052710-4052711	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs373157441	chr6:4052740-4052741	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs528699963	chr6:4052754-4052755	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs536191808	chr6:4052771-4052772	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs185896357	chr6:4052807-4052808	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs576707451	chr6:4052851-4052852	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs188480594	chr6:4052852-4052853	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs367806361	chr6:4052930-4052931	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs55652448	chr6:4053047-4053048	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs150279302	chr6:4053074-4053075	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs373840574	chr6:4053129-4053130	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs371579511	chr6:4053147-4053148	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs201734123	chr6:4053148-4053149	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs551239552	chr6:4053175-4053176	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs555331580	chr6:4053269-4053270	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs567592372	chr6:4053289-4053290	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs536644090	chr6:4053316-4053317	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs853398	chr6:4053356-4053357	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
37	rs146916459	chr6:4053358-4053359	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
38	rs115668194	chr6:4053364-4053365	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs535067995	chr6:4053399-4053400	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs181620310	chr6:4053426-4053427	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs186593064	chr6:4053449-4053450	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs575075342	chr6:4053459-4053460	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs148867070	chr6:4053460-4053461	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs544137693	chr6:4053480-4053481	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs578099798	chr6:4053566-4053567	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs561229230	chr6:4053571-4053572	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs139337214	chr6:4053576-4053577	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs540181037	chr6:4053601-4053602	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs141555182	chr6:4053604-4053605	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs368810513	chr6:4053631-4053632	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:93)

Disease	PMID	Source
Developmental delay	19490664	CNVD
Cancer	21183584	CNVD
Multiple Epiphyseal Dysplasia	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Glaucoma	18694899	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	17603634	CNVD
Cancer	20164920	CNVD
Colorectal cancer	21297112	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Myelodysplastic syndrome	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	17550852	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	21364760	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
Autism	22495311	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Myelofibrosis	22110671	CNVD
Uveal melanoma	20484589	CNVD
Melanoma	18172304	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
small cell lung cancer	20016488	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:891 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:4023000-4063600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:4023200-4064000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr6:4023400-4071600	Weak transcription	Stomach Mucosa	stomach
4	chr6:4023800-4067000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr6:4024600-4059200	Strong transcription	Fetal Thymus	thymus
6	chr6:4027200-4058200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
7	chr6:4030600-4065800	Strong transcription	iPS-18 Cell Line	embryonic stem cell
8	chr6:4030800-4059000	Strong transcription	HUES64 Cell Line	embryonic stem cell
9	chr6:4030800-4066600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr6:4031000-4059200	Strong transcription	HUES6 Cell Line	embryonic stem cell
11	chr6:4031000-4066400	Strong transcription	HUES48 Cell Line	embryonic stem cell
12	chr6:4031200-4066600	Strong transcription	Monocytes-CD14+_RO01746	blood
13	chr6:4033400-4055200	Strong transcription	K562	blood
14	chr6:4033800-4054400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr6:4034000-4066800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr6:4035600-4063600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
17	chr6:4035600-4064200	Strong transcription	H1 Cell Line	embryonic stem cell
18	chr6:4035800-4054400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr6:4035800-4057400	Strong transcription	Cortex derived primary cultured neurospheres	brain
20	chr6:4035800-4058400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr6:4035800-4058600	Strong transcription	Primary T cells from cord blood	blood
22	chr6:4035800-4064600	Strong transcription	Primary B cells from peripheral blood	blood
23	chr6:4035800-4065000	Strong transcription	Dnd41	blood
24	chr6:4035800-4066000	Strong transcription	Primary monocytes fromperipheralblood	blood
25	chr6:4035800-4066000	Strong transcription	Rectal Mucosa Donor 29	rectum
26	chr6:4035800-4066200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
27	chr6:4036000-4058200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr6:4036000-4066600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr6:4036000-4066600	Strong transcription	Duodenum Mucosa	Duodenum
30	chr6:4036400-4055200	Strong transcription	Skeletal Muscle Female	skeletal muscle
31	chr6:4036600-4055200	Strong transcription	NHEK	skin
32	chr6:4037200-4059400	Strong transcription	Primary T cells fromperipheralblood	blood
33	chr6:4037200-4066200	Strong transcription	Liver	Liver
34	chr6:4037400-4054200	Strong transcription	NH-A	brain
35	chr6:4037400-4055600	Strong transcription	Hela-S3	cervix
36	chr6:4037400-4058400	Strong transcription	HepG2	liver
37	chr6:4037400-4059400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
38	chr6:4037400-4065800	Strong transcription	Placenta	Placenta
39	chr6:4037600-4053800	Strong transcription	Muscle Satellite Cultured Cells	--
40	chr6:4037600-4055400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr6:4037600-4066200	Strong transcription	Rectal Mucosa Donor 31	rectum
42	chr6:4037600-4066400	Strong transcription	Primary neutrophils fromperipheralblood	blood
43	chr6:4037800-4058600	Strong transcription	Primary T helper cells fromperipheralblood	blood
44	chr6:4037800-4058600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
45	chr6:4037800-4058800	Strong transcription	Primary T helper naive cells from peripheral blood	blood
46	chr6:4037800-4059400	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
47	chr6:4038200-4058200	Strong transcription	Primary T helper cells PMA-I stimulated	--
48	chr6:4038800-4053200	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
49	chr6:4038800-4058200	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
50	chr6:4038800-4066000	Strong transcription	Breast Myoepithelial Primary Cells	Breast

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