No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs180856400 |
chr6:31237060-31237061 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs2894204 |
chr6:31237061-31237062 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
3 |
rs371039627 |
chr6:31237085-31237086 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs17885557 |
chr6:31237087-31237088 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
5 |
rs375542879 |
chr6:31237104-31237105 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs1130838 |
chr6:31237124-31237125 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
7 |
rs35708511 |
chr6:31237162-31237163 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
8 |
rs545140350 |
chr6:31237193-31237194 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs542273765 |
chr6:31237199-31237200 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs281860589 |
chr6:31237200-31237201 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs370407485 |
chr6:31237208-31237209 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs527842025 |
chr6:31237217-31237218 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs185768419 |
chr6:31237229-31237230 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs9264596 |
chr6:31237230-31237231 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
15 |
rs9264597 |
chr6:31237233-31237234 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
16 |
rs17881458 |
chr6:31237237-31237238 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
17 |
rs550578214 |
chr6:31237250-31237251 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs41562921 |
chr6:31237254-31237255 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
19 |
rs386698956 |
chr6:31237255-31237256 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs41550315 |
chr6:31237264-31237265 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs111308207 |
chr6:31237268-31237269 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs3177824 |
chr6:31237269-31237270 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs139702282 |
chr6:31237272-31237273 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs41559915 |
chr6:31237275-31237276 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
25 |
rs76294545 |
chr6:31237284-31237285 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs568718965 |
chr6:31237289-31237290 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs567530604 |
chr6:31237312-31237313 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs68094471 |
chr6:31237323-31237324 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
29 |
rs66772001 |
chr6:31237333-31237334 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
30 |
rs72558163 |
chr6:31237342-31237343 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
31 |
rs386698957 |
chr6:31237353-31237354 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs543182678 |
chr6:31237380-31237381 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs56010430 |
chr6:31237405-31237406 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
34 |
rs386698958 |
chr6:31237437-31237438 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs68037221 |
chr6:31237449-31237450 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding regionCpG island
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
36 |
rs72558161 |
chr6:31237457-31237458 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
37 |
rs386698959 |
chr6:31237461-31237462 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs66620546 |
chr6:31237463-31237464 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
39 |
rs72558159 |
chr6:31237513-31237514 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
40 |
rs200405836 |
chr6:31237528-31237529 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs45437892 |
chr6:31237542-31237543 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs3819287 |
chr6:31237563-31237564 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
43 |
rs537747274 |
chr6:31237565-31237566 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs72558157 |
chr6:31237571-31237572 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs529514818 |
chr6:31237576-31237577 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs372183108 |
chr6:31237578-31237579 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs373826500 |
chr6:31237584-31237585 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs9264606 |
chr6:31237592-31237593 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
49 |
rs9264607 |
chr6:31237605-31237606 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
50 |
rs189845311 |
chr6:31237659-31237660 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|