Variant report

Variant	nsv603085
Chromosome Location	chr6:49429706-49450341
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:553)
CpG islands
(count:920)
Chromatin interactive
region (count:33)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:553 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:49430669-49431330	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:49430898-49431459	K562	blood:	n/a	n/a
3	ATF1	chr6:49430493-49431455	K562	blood:	n/a	n/a
4	ATF2	chr6:49430920-49431355	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr6:49430537-49431261	GM12878	blood:	n/a	n/a
6	ATF2	chr6:49430862-49431267	GM12878	blood:	n/a	n/a
7	ATF3	chr6:49430892-49431241	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF3	chr6:49430811-49431197	HepG2	liver:	n/a	n/a
9	ATF3	chr6:49430814-49431162	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF3	chr6:49430754-49431226	GM12878	blood:	n/a	n/a
11	ATF3	chr6:49430749-49431205	K562	blood:	n/a	n/a
12	ATF3	chr6:49430743-49431444	K562	blood:	n/a	n/a
13	ATF3	chr6:49430858-49431143	GM12878	blood:	n/a	n/a
14	BACH1	chr6:49430967-49431444	K562	blood:	n/a	n/a
15	BCLAF1	chr6:49430751-49431303	GM12878	blood:	n/a	chr6:49431082-49431091
16	BHLHE40	chr6:49429667-49429722	HepG2	liver:	n/a	n/a
17	BHLHE40	chr6:49430810-49431292	GM12878	blood:	n/a	n/a
18	BHLHE40	chr6:49430671-49431434	K562	blood:	n/a	n/a
19	BRCA1	chr6:49430703-49431594	Hela-S3	cervix:	n/a	n/a
20	BRCA1	chr6:49430565-49431166	HepG2	liver:	n/a	n/a
21	BRCA1	chr6:49430909-49431273	H1-hESC	embryonic stem cell:	n/a	n/a
22	BRCA1	chr6:49430602-49431217	GM12878	blood:	n/a	n/a
23	CBX3	chr6:49430514-49431361	K562	blood:	n/a	n/a
24	CBX3	chr6:49430795-49431366	K562	blood:	n/a	n/a
25	CCNT2	chr6:49430727-49431364	K562	blood:	n/a	n/a
26	CEBPB	chr6:49431051-49431139	K562	blood:	n/a	n/a
27	CEBPB	chr6:49430824-49431570	K562	blood:	n/a	chr6:49431417-49431428 chr6:49431417-49431428 chr6:49431415-49431428
28	CEBPD	chr6:49430720-49431024	HepG2	liver:	n/a	n/a
29	CEBPD	chr6:49430719-49431317	K562	blood:	n/a	n/a
30	CEBPZ	chr6:49431025-49431283	HepG2	liver:	n/a	n/a
31	CHD1	chr6:49430423-49431181	GM12878	blood:	n/a	n/a
32	CHD1	chr6:49431112-49431905	H1-hESC	embryonic stem cell:	n/a	n/a
33	CHD2	chr6:49430602-49431369	GM12878	blood:	n/a	n/a
34	CHD2	chr6:49430822-49431179	HepG2	liver:	n/a	n/a
35	CHD2	chr6:49430654-49431347	H1-hESC	embryonic stem cell:	n/a	n/a
36	CHD2	chr6:49430700-49431529	Hela-S3	cervix:	n/a	n/a
37	CHD2	chr6:49430673-49431352	K562	blood:	n/a	n/a
38	CREB1	chr6:49430563-49431533	H1-hESC	embryonic stem cell:	n/a	n/a
39	CREB1	chr6:49430501-49431493	HepG2	liver:	n/a	n/a
40	CREB1	chr6:49430787-49431191	A549	lung:	n/a	n/a
41	CREB1	chr6:49430387-49431472	GM12878	blood:	n/a	n/a
42	CREB1	chr6:49430693-49431283	ECC-1	luminal epithelium:	n/a	n/a
43	CREB1	chr6:49430545-49431633	K562	blood:	n/a	n/a
44	CREB1	chr6:49430633-49431323	H1-hESC	embryonic stem cell:	n/a	n/a
45	CREB1	chr6:49430713-49431244	A549	lung:	n/a	n/a
46	CREB1	chr6:49430514-49431463	GM12878	blood:	n/a	n/a
47	CREB1	chr6:49430395-49431675	HepG2	liver:	n/a	n/a
48	CREB1	chr6:49430602-49431350	ECC-1	luminal epithelium:	n/a	n/a
49	CREB1	chr6:49430334-49431675	K562	blood:	n/a	n/a
50	CTCF	chr6:49430792-49431506	K562	blood:	n/a	n/a

(count:920 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:49431023-49431073	ECC-1	luminal epithelium:	n/a
2	chr6:49431067-49431117	AoSMC	blood vessel:	n/a
3	chr6:49431133-49431183	CMK	blood:	n/a
4	chr6:49430596-49430646	GM12878	blood:	n/a
5	chr6:49431011-49431061	AG10803	skin:	n/a
6	chr6:49431023-49431073	ECC-1	luminal epithelium:	n/a
7	chr6:49431067-49431117	AoSMC	blood vessel:	n/a
8	chr6:49431133-49431183	CMK	blood:	n/a
9	chr6:49430596-49430646	GM12878	blood:	n/a
10	chr6:49431011-49431061	AG10803	skin:	n/a
11	chr6:49430788-49430838	BJ	skin:	n/a
12	chr6:49431433-49431483	HRPEpiC	eye:	n/a
13	chr6:49431117-49431167	BJ	skin:	n/a
14	chr6:49431133-49431183	HNPCEpiC	eye:	n/a
15	chr6:49429719-49429769	HNPCEpiC	eye:	n/a
16	chr6:49431067-49431117	RPTEC	kidney:	n/a
17	chr6:49431135-49431185	AG09319	gingival:	n/a
18	chr6:49431061-49431111	K562	blood:	n/a
19	chr6:49431023-49431073	GM12891	blood:	n/a
20	chr6:49430788-49430838	HMEC	breast:	n/a
21	chr6:49430596-49430646	ECC-1	luminal epithelium:	n/a
22	chr6:49431231-49431281	Hepatocyte	liver:	n/a
23	chr6:49430788-49430838	HepG2	liver:	n/a
24	chr6:49431067-49431117	HEK293	kidney:	embryo
25	chr6:49431231-49431281	ovcar-3	ovarian:	n/a
26	chr6:49431433-49431483	HIPEpiC	eye:	n/a
27	chr6:49431133-49431183	T-47D	breast:	n/a
28	chr6:49429719-49429769	HRPEpiC	eye:	n/a
29	chr6:49431288-49431338	HUVEC	blood vessel:	n/a
30	chr6:49431037-49431087	SK-N-SH_RA	brain:	n/a
31	chr6:49431231-49431281	Caco-2	colon:	n/a
32	chr6:49431067-49431117	Hela-S3	cervix:	n/a
33	chr6:49431135-49431185	HIPEpiC	eye:	n/a
34	chr6:49431011-49431061	NHBE	bronchial:	n/a
35	chr6:49431288-49431338	NHDF-neo	bronchial:	n/a
36	chr6:49431117-49431167	AG04450	lung:	fetal
37	chr6:49431011-49431061	HCPEpiC	choroid plexus:	n/a
38	chr6:49431288-49431338	Caco-2	colon:	n/a
39	chr6:49431117-49431167	Jurkat	blood:	n/a
40	chr6:49431288-49431338	SK-N-SH_RA	brain:	n/a
41	chr6:49431067-49431117	GM06990	blood:	n/a
42	chr6:49429719-49429769	GM06990	blood:	n/a
43	chr6:49431023-49431073	HCF	heart:	n/a
44	chr6:49429719-49429769	GM12892	blood:	n/a
45	chr6:49429719-49429769	AG09309	skin:	n/a
46	chr6:49431133-49431183	HL-60	blood:	n/a
47	chr6:49431288-49431338	U87	brain:	n/a
48	chr6:49434230-49434280	Jurkat	blood:	n/a
49	chr6:49434230-49434280	NHBE	bronchial:	n/a
50	chr6:49431135-49431185	HCF	heart:	n/a

(count:33 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:49431721..49433516-chr6:49458650..49460317,2	K562	blood:
2	chr6:49428075..49430840-chr6:49629508..49632761,3	K562	blood:
3	chr6:49445932..49448619-chr6:49451327..49454522,3	K562	blood:
4	chr6:49352086..49353625-chr6:49427377..49430292,2	K562	blood:
5	chr6:49430814..49434554-chr6:49435303..49440470,7	K562	blood:
6	chr6:49431208..49433199-chr6:49629940..49632995,3	K562	blood:
7	chr6:49438767..49441151-chr6:49557071..49559499,2	K562	blood:
8	chr15:65596663..65597464-chr6:49430249..49430946,2	Hela-S3	cervix:
9	chr6:49444826..49447432-chr6:49451327..49454178,2	K562	blood:
10	chr6:49427543..49430477-chr6:49436132..49438156,2	K562	blood:
11	chr6:20401677..20404627-chr6:49430582..49432502,2	K562	blood:
12	chr6:49435298..49437139-chr6:49437563..49440093,3	K562	blood:
13	chr6:49434330..49436569-chr6:49445501..49447295,2	K562	blood:
14	chr6:49438004..49440787-chr6:49447034..49448674,2	K562	blood:
15	chr12:53845489..53846145-chr6:49430663..49431569,2	Hela-S3	cervix:
16	chr6:49431034..49433183-chr6:49434842..49436900,4	MCF-7	breast:
17	chr6:49434330..49436569-chr6:49445501..49447295,2	K562	blood:
18	chr6:49419838..49421598-chr6:49428414..49430900,2	K562	blood:
19	chr6:49428636..49430625-chr6:49435581..49438306,2	MCF-7	breast:
20	chr6:49429390..49432411-chr6:49516710..49519961,3	MCF-7	breast:
21	chr6:49429532..49432172-chr6:49444762..49446300,2	K562	blood:
22	chr1:173836868..173837651-chr6:49432317..49433018,2	Hela-S3	cervix:
23	chr6:49428636..49430625-chr6:49435581..49438306,2	MCF-7	breast:
24	chr6:49431483..49432991-chr6:49522409..49524636,2	MCF-7	breast:
25	chr6:49435298..49437139-chr6:49437563..49440093,3	K562	blood:
26	chr6:49429949..49432434-chr6:49603239..49605832,3	K562	blood:
27	chr6:49423687..49425386-chr6:49433841..49436360,2	K562	blood:
28	chr17:76124180..76124774-chr6:49430693..49431317,2	Hela-S3	cervix:
29	chr6:49428409..49430841-chr6:49452599..49454961,2	K562	blood:
30	chr6:49427543..49430477-chr6:49436132..49438156,2	K562	blood:
31	chr6:49429898..49432613-chr6:49432665..49435098,5	K562	blood:
32	chr6:49401244..49402947-chr6:49432509..49434814,2	K562	blood:
33	chr6:49438004..49440787-chr6:49447034..49448674,2	K562	blood:

No data

Variant related genes	Relation type
MUT	TF binding region
CENPQ	TF binding region
MUT	CpG island
CENPQ	CpG island
ENSG00000200156	chromatin interactions
ENSG00000185278	chromatin interactions
ENSG00000234741	chromatin interactions
ENSG00000112242	chromatin interactions
ENSG00000146085	chromatin interactions
ENSG00000112077	chromatin interactions
ENSG00000031691	chromatin interactions
ENSG00000197261	chromatin interactions
ENSG00000141524	chromatin interactions
ENSG00000197111	chromatin interactions

Extended variants
information (count: 746 )
Associated
traits (count: 83 )

Variant overlapped rSNPs/rCNVs (count:746 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs9369902	chr6:49429706-49429707	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs568389308	chr6:49429722-49429723	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs544886487	chr6:49429801-49429802	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs141596114	chr6:49429804-49429805	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs529288203	chr6:49429838-49429839	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs34784662	chr6:49429894-49429895	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs368389538	chr6:49429907-49429908	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs192405093	chr6:49429919-49429920	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs185513883	chr6:49429922-49429923	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs569977827	chr6:49429980-49429981	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs72855817	chr6:49430012-49430013	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs555714106	chr6:49430018-49430019	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs564802484	chr6:49430024-49430025	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs541231156	chr6:49430080-49430081	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs7750918	chr6:49430082-49430083	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs577759701	chr6:49430094-49430095	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs544812551	chr6:49430127-49430128	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs551967330	chr6:49430132-49430133	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs150896019	chr6:49430134-49430135	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs530448617	chr6:49430150-49430151	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs542185538	chr6:49430191-49430192	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs139481482	chr6:49430196-49430197	Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs143370636	chr6:49430217-49430218	Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs11752595	chr6:49430319-49430320	Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs373209227	chr6:49430325-49430326	Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs571720780	chr6:49430377-49430378	Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs547672990	chr6:49430409-49430410	Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs547504100	chr6:49430415-49430416	Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs147169284	chr6:49430441-49430442	Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs528008321	chr6:49430559-49430560	Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs533546976	chr6:49430586-49430587	Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
32	rs190435831	chr6:49430614-49430615	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs193106575	chr6:49430631-49430632	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs570099892	chr6:49430655-49430656	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
35	rs533175676	chr6:49430707-49430708	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
36	rs549714578	chr6:49430715-49430716	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
37	rs537451772	chr6:49430751-49430752	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
38	rs549352395	chr6:49430756-49430757	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
39	rs149691991	chr6:49430761-49430762	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
40	rs547671073	chr6:49430784-49430785	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
41	rs377466405	chr6:49430801-49430802	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
42	rs534958531	chr6:49430809-49430810	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
43	rs553218776	chr6:49430854-49430855	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
44	rs184509406	chr6:49430855-49430856	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
45	rs200217597	chr6:49430872-49430873	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs538802256	chr6:49430903-49430904	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
47	rs145574629	chr6:49430933-49430934	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
48	rs556798197	chr6:49430936-49430937	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
49	rs144562919	chr6:49430943-49430944	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
50	rs116391415	chr6:49430967-49430968	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:83)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Ovarian cancer	21720365	CNVD
Osteosarcoma	21197465	CNVD
Gastric cancer	24379144	CNVD
Neuroblastoma	18923191	CNVD
abnormal development	18461090	CNVD
Breast cancer	17603634	CNVD
Breast cancer	21364760	CNVD
Follicular lymphoma	16790693	CNVD
Osteosarcoma	19286668	CNVD
Neurocytoma	17123091	CNVD
Systemic lupus erythematosus	17503323	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Myelofibrosis	22110671	CNVD
Heart disease	21282601	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Breast cancer	16608533	CNVD
Olfactory neuroblastoma	18408657	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Neuroblastoma	19686582	CNVD
Neuroblastoma	17289879	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17133270	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Bladder cancer	21909424	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:725 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:49395400-49429800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr6:49406800-49430400	Weak transcription	Esophagus	oesophagus
3	chr6:49407800-49430400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr6:49407800-49430400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr6:49407800-49430400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr6:49407800-49430400	Weak transcription	Lung	lung
7	chr6:49408000-49430400	Weak transcription	Gastric	stomach
8	chr6:49408800-49430000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr6:49409200-49430400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr6:49410400-49430400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr6:49419800-49430000	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr6:49423200-49429800	Weak transcription	Aorta	Aorta
13	chr6:49423400-49429800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr6:49423400-49429800	Weak transcription	Fetal Muscle Leg	muscle
15	chr6:49425000-49429800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
16	chr6:49425800-49429800	Weak transcription	Left Ventricle	heart
17	chr6:49426000-49429800	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr6:49427200-49429800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr6:49427400-49430200	Weak transcription	Placenta	Placenta
20	chr6:49427600-49429800	Enhancers	Brain Angular Gyrus	brain
21	chr6:49427800-49429800	Enhancers	Primary T helper cells PMA-I stimulated	--
22	chr6:49428000-49430400	Flanking Active TSS	Liver	Liver
23	chr6:49428200-49429800	Enhancers	Fetal Brain Male	brain
24	chr6:49428200-49430000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
25	chr6:49428600-49429800	Weak transcription	Rectal Smooth Muscle	rectum
26	chr6:49428600-49430000	Weak transcription	H1 Cell Line	embryonic stem cell
27	chr6:49428800-49429800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
28	chr6:49428800-49430200	Enhancers	Primary B cells from peripheral blood	blood
29	chr6:49429000-49429800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr6:49429000-49430000	Enhancers	Primary B cells from cord blood	blood
31	chr6:49429000-49430000	Enhancers	Primary T cells fromperipheralblood	blood
32	chr6:49429000-49434200	Active TSS	GM12878-XiMat	blood
33	chr6:49429200-49429800	Enhancers	Fetal Muscle Trunk	muscle
34	chr6:49429200-49429800	Enhancers	Fetal Thymus	thymus
35	chr6:49429200-49430000	Enhancers	Spleen	Spleen
36	chr6:49429200-49430200	Enhancers	Small Intestine	intestine
37	chr6:49429200-49430400	Enhancers	Sigmoid Colon	Sigmoid Colon
38	chr6:49429200-49430800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr6:49429200-49432000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr6:49429400-49429800	Enhancers	Primary T cells from cord blood	blood
41	chr6:49429400-49429800	Active TSS	Primary hematopoietic stem cells short term culture	blood
42	chr6:49429400-49429800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
43	chr6:49429400-49429800	Enhancers	Primary T killer memory cells from peripheral blood	blood
44	chr6:49429400-49429800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
45	chr6:49429400-49429800	Active TSS	Duodenum Smooth Muscle	Duodenum
46	chr6:49429400-49429800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
47	chr6:49429400-49429800	Enhancers	Fetal Intestine Small	intestine
48	chr6:49429400-49429800	Enhancers	Fetal Stomach	stomach
49	chr6:49429400-49429800	Enhancers	Monocytes-CD14+_RO01746	blood
50	chr6:49429400-49430000	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast

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