No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs3806988 |
chr6:49431569-49431570 |
Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs114400046 |
chr6:49431613-49431614 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs531112116 |
chr6:49431624-49431625 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs3823114 |
chr6:49431720-49431721 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
5 |
rs558735266 |
chr6:49431758-49431759 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs572247750 |
chr6:49431791-49431792 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs561342186 |
chr6:49431804-49431805 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs185548886 |
chr6:49431809-49431810 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs546936310 |
chr6:49431824-49431825 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs571544494 |
chr6:49431843-49431844 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs146543457 |
chr6:49431844-49431845 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs189258695 |
chr6:49431877-49431878 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs536009060 |
chr6:49431886-49431887 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs554259522 |
chr6:49431916-49431917 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs180894632 |
chr6:49432075-49432076 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs141014463 |
chr6:49432136-49432137 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs149978803 |
chr6:49432152-49432153 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs554547713 |
chr6:49432211-49432212 |
Weak transcription Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs150215820 |
chr6:49432245-49432246 |
Weak transcription Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs558569683 |
chr6:49432286-49432287 |
Weak transcription Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs576754814 |
chr6:49432316-49432317 |
Weak transcription Enhancers Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs545720174 |
chr6:49432407-49432408 |
Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs557666964 |
chr6:49432483-49432484 |
Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs138902543 |
chr6:49432499-49432500 |
Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs187346057 |
chr6:49432545-49432546 |
Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs543018245 |
chr6:49432569-49432570 |
Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs561379140 |
chr6:49432643-49432644 |
Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs574566972 |
chr6:49432658-49432659 |
Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs192119577 |
chr6:49432668-49432669 |
Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs182951846 |
chr6:49432692-49432693 |
Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs186233618 |
chr6:49432827-49432828 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs148974272 |
chr6:49432854-49432855 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs79125444 |
chr6:49432894-49432895 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs568776126 |
chr6:49432912-49432913 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs529846863 |
chr6:49432940-49432941 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs547934478 |
chr6:49432941-49432942 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs566327320 |
chr6:49432979-49432980 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs563637550 |
chr6:49432994-49432995 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs34303307 |
chr6:49433004-49433005 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs78172334 |
chr6:49433005-49433006 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs113785666 |
chr6:49433016-49433017 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs190702675 |
chr6:49433080-49433081 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs546175192 |
chr6:49433086-49433087 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs529376487 |
chr6:49433123-49433124 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs537416702 |
chr6:49433125-49433126 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs557705618 |
chr6:49433139-49433140 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs377536532 |
chr6:49433146-49433147 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs7759071 |
chr6:49433198-49433199 |
Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
49 |
rs182575819 |
chr6:49433221-49433222 |
Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs187994027 |
chr6:49433279-49433280 |
Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|