Variant report

Variant	nsv603611
Chromosome Location	chr6:69235205-69242020
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:42 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs79571623	chr6:69235824-69235825	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs529590316	chr6:69235832-69235833	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs570321764	chr6:69235890-69235891	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs542595055	chr6:69235984-69235985	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs111932650	chr6:69236031-69236032	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs537615266	chr6:69236034-69236035	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs560327571	chr6:69236057-69236058	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs529590441	chr6:69236068-69236069	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs200519462	chr6:69236078-69236079	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs199950811	chr6:69236079-69236080	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs77032224	chr6:69236085-69236086	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs192589288	chr6:69236095-69236096	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs562704899	chr6:69236099-69236100	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs59155070	chr6:69236103-69236104	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs34713830	chr6:69236108-69236109	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs184418199	chr6:69236186-69236187	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs571296759	chr6:69236190-69236191	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs527426764	chr6:69236192-69236193	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs112564468	chr6:69236198-69236199	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs567195271	chr6:69236210-69236211	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs187221247	chr6:69236214-69236215	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs556506107	chr6:69236245-69236246	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs569833291	chr6:69236248-69236249	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs118049823	chr6:69236265-69236266	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs558822440	chr6:69236288-69236289	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs553530797	chr6:69236328-69236329	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs115133891	chr6:69236344-69236345	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs554090623	chr6:69236345-69236346	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs192547903	chr6:69236367-69236368	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs564986121	chr6:69236401-69236402	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs542876539	chr6:69236414-69236415	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs13437504	chr6:69236419-69236420	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs141423859	chr6:69236435-69236436	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs184670498	chr6:69236475-69236476	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs572007655	chr6:69236502-69236503	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs545183419	chr6:69236527-69236528	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs565381911	chr6:69236549-69236550	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs527378978	chr6:69236562-69236563	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs201101111	chr6:69236565-69236566	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs61707092	chr6:69236577-69236578	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs114393026	chr6:69236588-69236589	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs529730125	chr6:69236592-69236593	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16272173	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21364760	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69235800-69236200	Enhancers	HUES6 Cell Line	embryonic stem cell
2	chr6:69236000-69236600	Enhancers	HUES48 Cell Line	embryonic stem cell

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