Variant report

Variant	nsv603764
Chromosome Location	chr6:75963751-76025603
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1441)
CpG islands
(count:1588)
Chromatin interactive
region (count:103)
LncRNA
region (count:14)
Mature miRNA
region (count: 0)
miRNA target
sites (count:4)

(count:1441 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:75976467-75976799	K562	blood:	n/a	n/a
2	ARID3A	chr6:76006923-76007258	HepG2	liver:	n/a	chr6:76006971-76006987
3	ARID3A	chr6:75994224-75995352	HepG2	liver:	n/a	n/a
4	ATF1	chr6:75994470-75995206	K562	blood:	n/a	n/a
5	ATF2	chr6:75994260-75995501	GM12878	blood:	n/a	n/a
6	ATF2	chr6:75994307-75995618	GM12878	blood:	n/a	n/a
7	BACH1	chr6:75993810-75994247	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr6:75983709-75983780	K562	blood:	n/a	n/a
9	BACH1	chr6:75977860-75978616	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr6:75994960-75995137	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr6:75993397-75993848	K562	blood:	n/a	n/a
12	BATF	chr6:75994338-75994903	GM12878	blood:	n/a	n/a
13	BCL11A	chr6:75977824-75978126	H1-hESC	embryonic stem cell:	n/a	n/a
14	BCL11A	chr6:75994419-75994930	GM12878	blood:	n/a	n/a
15	BCL3	chr6:75984792-75985379	A549	lung:	n/a	n/a
16	BCL3	chr6:75994445-75994982	A549	lung:	n/a	n/a
17	BCLAF1	chr6:75994225-75995381	GM12878	blood:	n/a	n/a
18	BCLAF1	chr6:75994298-75995124	GM12878	blood:	n/a	n/a
19	BCLAF1	chr6:75994293-75994927	K562	blood:	n/a	n/a
20	BCLAF1	chr6:75994359-75994916	K562	blood:	n/a	n/a
21	BHLHE40	chr6:75994237-75995170	HepG2	liver:	n/a	chr6:75995133-75995154
22	BHLHE40	chr6:75994230-75995556	GM12878	blood:	n/a	chr6:75995133-75995154
23	BHLHE40	chr6:75994743-75995213	A549	lung:	n/a	chr6:75995133-75995154
24	BHLHE40	chr6:75993846-75995819	K562	blood:	n/a	chr6:75995133-75995154
25	BRCA1	chr6:75977855-75978271	H1-hESC	embryonic stem cell:	n/a	n/a
26	BRCA1	chr6:75994693-75995073	GM12878	blood:	n/a	n/a
27	BRCA1	chr6:75994045-75995001	Hela-S3	cervix:	n/a	n/a
28	BRCA1	chr6:75993967-75994281	H1-hESC	embryonic stem cell:	n/a	n/a
29	BRCA1	chr6:76015493-76015500	H1-hESC	embryonic stem cell:	n/a	n/a
30	CBX3	chr6:75994423-75994814	K562	blood:	n/a	n/a
31	CBX3	chr6:75994122-75994987	K562	blood:	n/a	n/a
32	CBX3	chr6:75982198-75982648	HCT-116	colon:	n/a	n/a
33	CCNT2	chr6:75994154-75995181	K562	blood:	n/a	n/a
34	CEBPB	chr6:75982779-75983155	IMR90	lung:	n/a	n/a
35	CEBPB	chr6:76025151-76025428	A549	lung:	n/a	chr6:76025282-76025293 chr6:76025284-76025293 chr6:76025282-76025295 chr6:76025282-76025295 chr6:76025283-76025294
36	CEBPB	chr6:75994373-75995324	K562	blood:	n/a	chr6:75995198-75995215
37	CEBPB	chr6:75996136-75996435	Hela-S3	cervix:	n/a	chr6:75996316-75996329
38	CEBPB	chr6:75999544-75999786	HepG2	liver:	n/a	chr6:75999647-75999658
39	CEBPB	chr6:75996116-75996570	A549	lung:	n/a	chr6:75996316-75996329
40	CEBPB	chr6:75994649-75996557	K562	blood:	n/a	chr6:75996316-75996329 chr6:75996043-75996051 chr6:75995198-75995215
41	CEBPB	chr6:75988246-75988559	IMR90	lung:	n/a	n/a
42	CEBPB	chr6:75994091-75994106	H1-hESC	embryonic stem cell:	n/a	n/a
43	CEBPB	chr6:76025128-76025452	HepG2	liver:	n/a	chr6:76025282-76025293 chr6:76025284-76025293 chr6:76025282-76025295 chr6:76025282-76025295 chr6:76025283-76025294
44	CEBPB	chr6:76001443-76001808	HepG2	liver:	n/a	chr6:76001622-76001633 chr6:76001624-76001635 chr6:76001624-76001633 chr6:76001622-76001635 chr6:76001624-76001633 chr6:76001622-76001635 chr6:76001624-76001633 chr6:76001622-76001635 chr6:76001624-76001633
45	CEBPB	chr6:75982965-75983231	HepG2	liver:	n/a	n/a
46	CEBPB	chr6:75979861-75980078	IMR90	lung:	n/a	chr6:75979897-75979908
47	CEBPB	chr6:76009319-76009577	A549	lung:	n/a	n/a
48	CEBPB	chr6:75996137-75996490	HepG2	liver:	n/a	chr6:75996316-75996329
49	CEBPB	chr6:75988272-75988556	A549	lung:	n/a	n/a
50	CEBPB	chr6:75994360-75995401	GM12878	blood:	n/a	chr6:75995198-75995215

(count:1588 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:75994833-75994883	Jurkat	blood:	n/a
2	chr6:76022556-76022606	AG10803	skin:	n/a
3	chr6:75994833-75994883	Jurkat	blood:	n/a
4	chr6:76022556-76022606	AG10803	skin:	n/a
5	chr6:76022515-76022565	ovcar-3	ovarian:	n/a
6	chr6:76018362-76018412	A549	lung:	n/a
7	chr6:75994833-75994883	NT2-D1	testis:	n/a
8	chr6:76018489-76018539	PrEC	prostate:	n/a
9	chr6:75994262-75994312	CMK	blood:	n/a
10	chr6:75995845-75995895	MCF10A-Er-Src	breast:	n/a
11	chr6:75994771-75994821	SK-N-SH_RA	brain:	n/a
12	chr6:75994833-75994883	NH-A	brain:	n/a
13	chr6:76022515-76022565	RPTEC	kidney:	n/a
14	chr6:75994709-75994759	AoSMC	blood vessel:	n/a
15	chr6:75994833-75994883	Hepatocyte	liver:	n/a
16	chr6:75994713-75994763	ovcar-3	ovarian:	n/a
17	chr6:76000847-76000897	RPTEC	kidney:	n/a
18	chr6:76018362-76018412	AG09309	skin:	n/a
19	chr6:76022219-76022269	A549	lung:	n/a
20	chr6:76022447-76022497	MCF-7	breast:	n/a
21	chr6:75990769-75990819	AG04449	skin:	fetal
22	chr6:75995845-75995895	AG04449	skin:	fetal
23	chr6:76022515-76022565	A549	lung:	n/a
24	chr6:76022250-76022300	HUVEC	blood vessel:	n/a
25	chr6:75994709-75994759	PANC-1	pancreas:	n/a
26	chr6:75994470-75994520	AG04449	skin:	fetal
27	chr6:75988568-75988618	HEK293	kidney:	embryo
28	chr6:75965559-75965609	GM12892	blood:	n/a
29	chr6:75994262-75994312	AG09319	gingival:	n/a
30	chr6:76018362-76018412	AG10803	skin:	n/a
31	chr6:76022250-76022300	Hela-S3	cervix:	n/a
32	chr6:76022515-76022565	T-47D	breast:	n/a
33	chr6:75994709-75994759	SK-N-MC	brain:	n/a
34	chr6:75994563-75994613	SK-N-MC	brain:	n/a
35	chr6:76022219-76022269	HUVEC	blood vessel:	n/a
36	chr6:75965559-75965609	SKMC	muscle:	n/a
37	chr6:75994754-75994804	HCPEpiC	choroid plexus:	n/a
38	chr6:75994709-75994759	NHBE	bronchial:	n/a
39	chr6:75977411-75977461	AG10803	skin:	n/a
40	chr6:75988568-75988618	NH-A	brain:	n/a
41	chr6:75994713-75994763	HNPCEpiC	eye:	n/a
42	chr6:75994709-75994759	PrEC	prostate:	n/a
43	chr6:75994873-75994923	GM12878	blood:	n/a
44	chr6:75995845-75995895	PANC-1	pancreas:	n/a
45	chr6:75994771-75994821	MCF10A-Er-Src	breast:	n/a
46	chr6:75994771-75994821	PFSK-1	brain:	n/a
47	chr6:76018489-76018539	A549	lung:	n/a
48	chr6:75994470-75994520	Hela-S3	cervix:	n/a
49	chr6:76022556-76022606	HRE	kidney:	n/a
50	chr6:75994754-75994804	AG04449	skin:	fetal

(count:103 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr6:75982220..75984333-chr6:75991304..75993082,2	MCF-7	breast:
2	chr6:75964680..75966328-chr6:75967865..75970436,2	K562	blood:
3	chr6:75982180..75984876-chr6:75993848..75995841,3	K562	blood:
4	chr6:75994626..75995177-chr9:86238029..86238568,2	Hela-S3	cervix:
5	chr6:75964472..75966148-chr6:75966930..75969432,2	MCF-7	breast:
6	chr6:75987095..75989976-chr6:75990032..75992457,3	MCF-7	breast:
7	chr6:75952125..75954686-chr6:76000719..76002598,2	K562	blood:
8	chr6:75962508..75964736-chr6:75965298..75967012,2	MCF-7	breast:
9	chr6:75981707..75983207-chr6:75986780..75988539,2	K562	blood:
10	chr6:75994942..75996622-chr6:76062325..76064970,2	K562	blood:
11	chr6:76015748..76017773-chr6:76019330..76020992,2	MCF-7	breast:
12	chr6:75967149..75971293-chr6:75986356..75989401,5	K562	blood:
13	chr6:75993518..75995468-chr6:75996205..75998181,2	K562	blood:
14	chr6:75976103..75976996-chr6:76006807..76007378,2	MCF-7	breast:
15	chr6:75981707..75983923-chr6:75986673..75988539,2	K562	blood:
16	chr6:75965913..75967860-chr6:75981485..75984376,2	K562	blood:
17	chr6:75985223..75988429-chr6:75989694..75991807,3	MCF-7	breast:
18	chr6:76008575..76011168-chr6:76015563..76017082,2	K562	blood:
19	chr6:75962314..75964868-chr6:75994799..75997539,2	K562	blood:
20	chr6:75981554..75983680-chr6:75993870..75995991,2	K562	blood:
21	chr6:75979886..75981407-chr6:75985729..75987544,2	K562	blood:
22	chr6:75963600..75966180-chr6:75967354..75969365,2	K562	blood:
23	chr6:76015748..76017773-chr6:76019330..76020992,2	MCF-7	breast:
24	chr6:74180943..74183846-chr6:75992415..75994208,2	K562	blood:
25	chr6:75993002..75994523-chr6:76016126..76017913,2	K562	blood:
26	chr6:76006957..76007653-chr6:76235682..76236264,3	MCF-7	breast:
27	chr6:75952128..75954360-chr6:75971385..75973567,3	K562	blood:
28	chr6:75959263..75962233-chr6:75963016..75966485,4	K562	blood:
29	chr6:76010991..76014106-chr6:76015817..76019364,3	K562	blood:
30	chr6:75940573..75942162-chr6:75964484..75966992,2	K562	blood:
31	chr6:75993142..75995708-chr6:76310246..76313188,4	K562	blood:
32	chr6:75951485..75954328-chr6:75992401..75995008,3	MCF-7	breast:
33	chr6:75968627..75970817-chr6:75971024..75972906,2	K562	blood:
34	chr6:30709897..30710718-chr6:75994395..75995294,2	Hela-S3	cervix:
35	chr6:75995037..75997566-chr6:76015682..76017767,2	K562	blood:
36	chr6:75974447..75978306-chr6:75980001..75984136,4	MCF-7	breast:
37	chr6:75979886..75981407-chr6:75985729..75987544,2	K562	blood:
38	chr6:75952062..75953597-chr6:75984103..75985781,2	MCF-7	breast:
39	chr6:75981554..75983680-chr6:75993870..75995991,2	K562	blood:
40	chr6:75985063..75990386-chr6:75992469..75996781,11	MCF-7	breast:
41	chr6:75993079..75996306-chr6:76012089..76014861,3	MCF-7	breast:
42	chr6:75992636..75994360-chr6:75994591..75996094,2	K562	blood:
43	chr6:75972939..75974519-chr6:75996831..75999415,2	K562	blood:
44	chr6:75993069..75997866-chr6:75997918..76002426,9	MCF-7	breast:
45	chr6:75983517..75986641-chr6:75988092..75990242,3	MCF-7	breast:
46	chr6:75994084..75996334-chr6:76010819..76013613,4	K562	blood:
47	chr6:75985223..75988429-chr6:75989694..75991807,3	MCF-7	breast:
48	chr6:75951942..75953572-chr6:75985751..75987713,2	K562	blood:
49	chr6:75987095..75989976-chr6:75990032..75992457,3	MCF-7	breast:
50	chr6:75952010..75957701-chr6:75957886..75965537,16	MCF-7	breast:

(count:14 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SENP6-3	chr6:76006237-76006719	ENSG00000225793.2
2	lnc-SENP6-3	chr6:75994749-75995025	ENSG00000225793.2
3	lnc-SENP6-3	chr6:75994730-75995025	ENSG00000225793
4	lnc-SENP6-3	chr6:75994749-75995107	NONHSAT113603
5	lnc-SENP6-3	chr6:75994730-75995025	NONHSAT113602
6	lnc-SENP6-3	chr6:76006237-76006283	ENSG00000225793
7	lnc-SENP6-3	chr6:76003209-76003310	ENSG00000225793
8	lnc-SENP6-3	chr6:75999970-76000054	ENSG00000225793.2
9	lnc-SENP6-3	chr6:76000665-76001217	ENSG00000225793.2
10	lnc-SENP6-3	chr6:76006235-76007696	NONHSAT113605
11	lnc-SENP6-3	chr6:75994762-75995025	ENSG00000225793.2
12	lnc-SENP6-3	chr6:75999970-76000054	NONHSAT113602
13	lnc-SENP6-3	chr6:76000665-76001580	NONHSAT113602
14	lnc-FILIP1-1	chr6:76001574-76003213	NONHSAT113604

No data

(count:4 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	TMEM30A	hsa-miR-215-5p	chr6:75964787-75964806
2	TMEM30A	hsa-miR-192-5p	chr6:75964787-75964806
3	TMEM30A	hsa-miR-26b-5p	chr6:75964175-75964195
4	TMEM30A	hsa-miR-26b-5p	chr6:75964470-75964491

Variant related genes	Relation type
COX7A2	TF binding region
ENSG00000225793	TF binding region
TMEM30A	TF binding region
COX7A2	CpG island
ENSG00000225793	CpG island
TMEM30A	CpG island
ENSG00000112695	chromatin interactions
ENSG00000080031	chromatin interactions
ENSG00000163689	chromatin interactions
ENSG00000272273	chromatin interactions
ENSG00000225793	chromatin interactions
ENSG00000138757	chromatin interactions
ENSG00000112697	chromatin interactions
ENSG00000112701	chromatin interactions
ENSG00000137312	chromatin interactions
ENSG00000135297	chromatin interactions
ENSG00000148057	chromatin interactions
EIF2S1	miRNA target sites
RDH11	miRNA target sites
FASLG	miRNA target sites

Extended variants
information (count: 2218 )
Associated
traits (count: 103 )

Variant overlapped rSNPs/rCNVs (count:2218 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs654428	chr6:75963751-75963752	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs537362635	chr6:75963773-75963774	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs190320222	chr6:75963784-75963785	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs1014874	chr6:75963892-75963893	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs534416661	chr6:75963901-75963902	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs182898992	chr6:75963905-75963906	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs565777007	chr6:75963929-75963930	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs381141	chr6:75963951-75963952	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs538593797	chr6:75963952-75963953	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs11539401	chr6:75964001-75964002	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs188596310	chr6:75964008-75964009	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs575577689	chr6:75964025-75964026	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs542980486	chr6:75964187-75964188	Weak transcription Strong transcription	Chromatin interactive region miRNA target site	2 gene(s)	Overlapped CNVs	n/a
14	rs192958493	chr6:75964215-75964216	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs573032073	chr6:75964217-75964218	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs114683330	chr6:75964297-75964298	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs559748543	chr6:75964321-75964322	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs556304851	chr6:75964348-75964349	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs551326201	chr6:75964378-75964379	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs145656334	chr6:75964430-75964431	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs368256763	chr6:75964432-75964433	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs184030903	chr6:75964530-75964531	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs549314037	chr6:75964532-75964533	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs188936094	chr6:75964604-75964605	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs15616	chr6:75964642-75964643	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs546883656	chr6:75964658-75964659	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs414624	chr6:75964688-75964689	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
28	rs555621826	chr6:75964828-75964829	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs538755600	chr6:75964865-75964866	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs638590	chr6:75964976-75964977	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs535841527	chr6:75965041-75965042	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs191103014	chr6:75965055-75965056	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs371287952	chr6:75965058-75965059	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs78758726	chr6:75965070-75965071	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs554804051	chr6:75965098-75965099	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs573065633	chr6:75965142-75965143	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs115000015	chr6:75965143-75965144	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs148873691	chr6:75965166-75965167	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs577694842	chr6:75965214-75965215	Strong transcription Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs112452124	chr6:75965230-75965231	Strong transcription Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs563333843	chr6:75965290-75965291	Strong transcription Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs530859619	chr6:75965293-75965294	Strong transcription Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs45596238	chr6:75965294-75965295	Strong transcription Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs183702078	chr6:75965331-75965332	Strong transcription Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs146489354	chr6:75965375-75965376	Strong transcription Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs141280962	chr6:75965382-75965383	Strong transcription Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs188413301	chr6:75965484-75965485	Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs532227746	chr6:75965505-75965506	Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs550733541	chr6:75965516-75965517	Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs568979576	chr6:75965543-75965544	Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:103)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Developmental delay	21147756	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Lung adenocarcinoma	21935476	CNVD
Myelodysplastic syndrome	18508791	CNVD
Breast cancer	21364760	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Myelofibrosis	22110671	CNVD
Salivary gland tumor	18059337	CNVD
Lung cancer	16773561	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial cell carcinoma	18451213	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Glioblastoma multiforme	21510904	CNVD

Chromatin state (count:2202 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75953800-75978200	Weak transcription	Gastric	stomach
2	chr6:75953800-75982200	Weak transcription	Spleen	Spleen
3	chr6:75954000-75974000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:75954200-75963800	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr6:75954200-75964800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
6	chr6:75954200-75965000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
7	chr6:75954200-75965200	Weak transcription	Primary B cells from peripheral blood	blood
8	chr6:75954200-75966400	Weak transcription	Aorta	Aorta
9	chr6:75954200-75967200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
10	chr6:75954200-75969400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr6:75954200-75971600	Weak transcription	K562	blood
12	chr6:75954200-75973200	Weak transcription	Psoas Muscle	Psoas
13	chr6:75954200-75978000	Weak transcription	Pancreas	Pancrea
14	chr6:75954200-75978000	Weak transcription	Small Intestine	intestine
15	chr6:75954200-75978000	Weak transcription	Stomach Mucosa	stomach
16	chr6:75954200-75978200	Weak transcription	Esophagus	oesophagus
17	chr6:75954200-75978400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr6:75954400-75963800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr6:75954400-75965000	Weak transcription	Cortex derived primary cultured neurospheres	brain
20	chr6:75954400-75965000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr6:75954400-75965000	Weak transcription	Brain Inferior Temporal Lobe	brain
22	chr6:75954400-75965000	Weak transcription	Stomach Smooth Muscle	stomach
23	chr6:75954400-75965600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr6:75954400-75965600	Weak transcription	Ovary	ovary
25	chr6:75954400-75967400	Weak transcription	Brain Angular Gyrus	brain
26	chr6:75954400-75968000	Weak transcription	NHEK	skin
27	chr6:75954400-75968600	Weak transcription	Fetal Brain Female	brain
28	chr6:75954400-75969000	Weak transcription	Colonic Mucosa	Colon
29	chr6:75954400-75972600	Weak transcription	Skeletal Muscle Male	skeletal muscle
30	chr6:75954400-75976800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
31	chr6:75954400-75977200	Weak transcription	Pancreatic Islets	Pancreatic Islet
32	chr6:75954400-75977600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
33	chr6:75954400-75978000	Weak transcription	Right Ventricle	heart
34	chr6:75954400-75978000	Weak transcription	Hela-S3	cervix
35	chr6:75954400-75986000	Weak transcription	Brain Germinal Matrix	brain
36	chr6:75954600-75963800	Weak transcription	GM12878-XiMat	blood
37	chr6:75954600-75964800	Weak transcription	Primary T helper cells PMA-I stimulated	--
38	chr6:75954600-75965600	Weak transcription	Duodenum Smooth Muscle	Duodenum
39	chr6:75954600-75968200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
40	chr6:75954600-75968200	Weak transcription	HMEC	breast
41	chr6:75954600-75968400	Weak transcription	Brain Hippocampus Middle	brain
42	chr6:75954600-75971800	Weak transcription	Fetal Stomach	stomach
43	chr6:75954600-75982400	Weak transcription	Brain Cingulate Gyrus	brain
44	chr6:75954800-75963800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr6:75954800-75963800	Weak transcription	A549	lung
46	chr6:75954800-75966200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
47	chr6:75954800-75967200	Weak transcription	HSMMtube	muscle
48	chr6:75954800-75969400	Weak transcription	HepG2	liver
49	chr6:75954800-75982200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
50	chr6:75954800-75988200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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