Variant report

Variant nsv604775
Chromosome Location chr6:140948427-141219060
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:784 , 50 per page) page: 1 2 3 4 5 6 7 ... 16
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:140946600-140948600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:140948600-140991200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr6:140949000-140957400 Weak transcription Right Atrium heart
4 chr6:140954200-140954800 Enhancers Fetal Heart heart
5 chr6:140954800-140956800 Weak transcription Fetal Heart heart
6 chr6:140956600-140957200 Enhancers Pancreatic Islets Pancreatic Islet
7 chr6:140956800-140958000 Enhancers Fetal Heart heart
8 chr6:140956800-140958400 Enhancers iPS-15b Cell Line embryonic stem cell
9 chr6:140957200-140957400 Enhancers Brain Germinal Matrix brain
10 chr6:140957200-140957400 Enhancers Fetal Brain Female brain
11 chr6:140957200-140957400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
12 chr6:140957200-140958200 Active TSS Brain Anterior Caudate brain
13 chr6:140957400-140957600 Enhancers Cortex derived primary cultured neurospheres brain
14 chr6:140957400-140957600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
15 chr6:140957400-140957600 Active TSS GM12878-XiMat blood
16 chr6:140957400-140957800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr6:140957400-140957800 Enhancers Primary B cells from peripheral blood blood
18 chr6:140957400-140957800 Enhancers Fetal Kidney kidney
19 chr6:140957400-140958000 Active TSS Brain Angular Gyrus brain
20 chr6:140957400-140958000 Flanking Active TSS Brain Germinal Matrix brain
21 chr6:140957400-140958000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
22 chr6:140957400-140958200 Active TSS Brain Cingulate Gyrus brain
23 chr6:140957400-140958200 Active TSS Brain Hippocampus Middle brain
24 chr6:140957400-140958200 Active TSS Brain Inferior Temporal Lobe brain
25 chr6:140957400-140958200 Active TSS Brain Substantia Nigra brain
26 chr6:140957400-140958200 Active TSS Right Atrium heart
27 chr6:140957400-140958400 Enhancers HUES6 Cell Line embryonic stem cell
28 chr6:140957400-140958400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
29 chr6:140957400-140958400 Flanking Active TSS Fetal Brain Female brain
30 chr6:140957400-140958400 Active TSS Pancreatic Islets Pancreatic Islet
31 chr6:140957400-140958400 Enhancers Fetal Stomach stomach
32 chr6:140957400-140958600 Enhancers iPS-18 Cell Line embryonic stem cell
33 chr6:140957400-140958600 Enhancers Fetal Brain Male brain
34 chr6:140957600-140957800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
35 chr6:140957600-140958000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
36 chr6:140957600-140958000 Flanking Active TSS GM12878-XiMat blood
37 chr6:140957600-140958200 Enhancers iPS-20b Cell Line embryonic stem cell
38 chr6:140957600-140958400 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr6:140957600-140958400 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr6:140957600-140958600 Enhancers H1 Cell Line embryonic stem cell
41 chr6:140957600-140958600 Enhancers HUES48 Cell Line embryonic stem cell
42 chr6:140957600-140958600 Enhancers HUES64 Cell Line embryonic stem cell
43 chr6:140957800-140958000 Enhancers Cortex derived primary cultured neurospheres brain
44 chr6:140957800-140958200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
45 chr6:140957800-140958200 Active TSS Duodenum Smooth Muscle Duodenum
46 chr6:140957800-140958200 Active TSS Fetal Kidney kidney
47 chr6:140957800-140958200 Enhancers Stomach Smooth Muscle stomach
48 chr6:140957800-140958400 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr6:140957800-140958400 Active TSS Rectal Smooth Muscle rectum
50 chr6:140957800-140958600 Enhancers ES-UCSF4 Cell Line embryonic stem cell

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