Variant report

Variant	nsv606004
Chromosome Location	chr7:6643664-6692573
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1276)
CpG islands
(count:2441)
Chromatin interactive
region (count:102)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1276 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:6680032-6680221	K562	blood:	n/a	n/a
2	ATF1	chr7:6652571-6652812	K562	blood:	n/a	n/a
3	ATF2	chr7:6676670-6676974	GM12878	blood:	n/a	n/a
4	ATF3	chr7:6676775-6677020	GM12878	blood:	n/a	n/a
5	ATF3	chr7:6679904-6680092	K562	blood:	n/a	n/a
6	ATF3	chr7:6676729-6677016	HepG2	liver:	n/a	n/a
7	ATF3	chr7:6676663-6677108	GM12878	blood:	n/a	n/a
8	ATF3	chr7:6676764-6677038	K562	blood:	n/a	n/a
9	BACH1	chr7:6677373-6677430	K562	blood:	n/a	n/a
10	BACH1	chr7:6676690-6676978	K562	blood:	n/a	n/a
11	BACH1	chr7:6676413-6677735	H1-hESC	embryonic stem cell:	n/a	n/a
12	BATF	chr7:6659295-6659530	GM12878	blood:	n/a	n/a
13	BATF	chr7:6679547-6679737	GM12878	blood:	n/a	n/a
14	BCL3	chr7:6662073-6662402	GM12878	blood:	n/a	n/a
15	BCL3	chr7:6676620-6677051	GM12878	blood:	n/a	chr7:6676897-6676906
16	BCL3	chr7:6662021-6662558	GM12878	blood:	n/a	chr7:6662039-6662052 chr7:6662045-6662058 chr7:6662050-6662059 chr7:6662047-6662056 chr7:6662040-6662053 chr7:6662044-6662053 chr7:6662036-6662049
17	BCLAF1	chr7:6676612-6677075	GM12878	blood:	n/a	chr7:6676897-6676906
18	BHLHE40	chr7:6679828-6680319	K562	blood:	n/a	n/a
19	BHLHE40	chr7:6685656-6685802	K562	blood:	n/a	n/a
20	BHLHE40	chr7:6677264-6677647	K562	blood:	n/a	chr7:6677407-6677423
21	BHLHE40	chr7:6676643-6677601	GM12878	blood:	n/a	chr7:6677407-6677423
22	BHLHE40	chr7:6676722-6677023	K562	blood:	n/a	n/a
23	BHLHE40	chr7:6676405-6676427	K562	blood:	n/a	n/a
24	BHLHE40	chr7:6679587-6679733	GM12878	blood:	n/a	n/a
25	BHLHE40	chr7:6663730-6663805	GM12878	blood:	n/a	n/a
26	BRCA1	chr7:6652546-6652789	Hela-S3	cervix:	n/a	n/a
27	CBX3	chr7:6677286-6677693	K562	blood:	n/a	n/a
28	CBX3	chr7:6676642-6676930	K562	blood:	n/a	n/a
29	CBX3	chr7:6679776-6680216	K562	blood:	n/a	n/a
30	CBX3	chr7:6679531-6680589	K562	blood:	n/a	n/a
31	CCNT2	chr7:6676308-6677623	K562	blood:	n/a	n/a
32	CEBPB	chr7:6679892-6680277	K562	blood:	n/a	n/a
33	CEBPB	chr7:6660916-6661830	MCF-7	breast:	n/a	n/a
34	CEBPB	chr7:6659050-6659078	A549	lung:	n/a	n/a
35	CEBPB	chr7:6679421-6679645	A549	lung:	n/a	n/a
36	CEBPB	chr7:6661220-6661668	HepG2	liver:	n/a	n/a
37	CEBPB	chr7:6655726-6655804	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr7:6661217-6661676	HepG2	liver:	n/a	n/a
39	CEBPB	chr7:6679380-6679580	HepG2	liver:	n/a	n/a
40	CEBPB	chr7:6661168-6661656	Hela-S3	cervix:	n/a	n/a
41	CEBPB	chr7:6679441-6679533	K562	blood:	n/a	n/a
42	CEBPB	chr7:6679964-6680434	K562	blood:	n/a	n/a
43	CEBPB	chr7:6658239-6658266	A549	lung:	n/a	n/a
44	CEBPB	chr7:6661397-6661453	A549	lung:	n/a	n/a
45	CEBPB	chr7:6659301-6659458	A549	lung:	n/a	n/a
46	CEBPD	chr7:6655616-6655901	HepG2	liver:	n/a	n/a
47	CEBPD	chr7:6676750-6677014	HepG2	liver:	n/a	n/a
48	CEBPD	chr7:6676694-6677135	HepG2	liver:	n/a	n/a
49	CEBPD	chr7:6676684-6677078	K562	blood:	n/a	n/a
50	CHD1	chr7:6676646-6677040	GM12878	blood:	n/a	n/a

(count:2441 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:6654880-6654930	NHBE	bronchial:	n/a
2	chr7:6654880-6654930	NHBE	bronchial:	n/a
3	chr7:6674031-6674081	MCF10A-Er-Src	breast:	n/a
4	chr7:6676168-6676218	HL-60	blood:	n/a
5	chr7:6644352-6644402	GM12891	blood:	n/a
6	chr7:6662789-6662839	A549	lung:	n/a
7	chr7:6651748-6651798	NHDF-neo	bronchial:	n/a
8	chr7:6676784-6676834	SAEC	small airway:	n/a
9	chr7:6676001-6676051	GM06990	blood:	n/a
10	chr7:6676832-6676882	LNCaP	prostate:	n/a
11	chr7:6676784-6676834	HRPEpiC	eye:	n/a
12	chr7:6644352-6644402	HCM	heart:	n/a
13	chr7:6661876-6661926	HUVEC	blood vessel:	n/a
14	chr7:6654880-6654930	GM12892	blood:	n/a
15	chr7:6647402-6647452	A549	lung:	n/a
16	chr7:6655727-6655777	NH-A	brain:	n/a
17	chr7:6648166-6648216	BE2_C	brain:	n/a
18	chr7:6651748-6651798	CMK	blood:	n/a
19	chr7:6677265-6677315	HRPEpiC	eye:	n/a
20	chr7:6674031-6674081	SK-N-SH_RA	brain:	n/a
21	chr7:6676630-6676680	Hepatocyte	liver:	n/a
22	chr7:6654880-6654930	Hepatocyte	liver:	n/a
23	chr7:6647402-6647452	ovcar-3	ovarian:	n/a
24	chr7:6677265-6677315	AG04450	lung:	fetal
25	chr7:6648166-6648216	RPTEC	kidney:	n/a
26	chr7:6681379-6681429	HRE	kidney:	n/a
27	chr7:6655834-6655884	AG10803	skin:	n/a
28	chr7:6676832-6676882	HAEpiC	amniotic membrane:	n/a
29	chr7:6654422-6654472	AG04450	lung:	fetal
30	chr7:6677606-6677656	SK-N-SH	brain:	n/a
31	chr7:6655711-6655761	Hepatocyte	liver:	n/a
32	chr7:6676168-6676218	NB4	blood:	n/a
33	chr7:6651748-6651798	HL-60	blood:	n/a
34	chr7:6676630-6676680	MCF10A-Er-Src	breast:	n/a
35	chr7:6644352-6644402	SK-N-SH_RA	brain:	n/a
36	chr7:6661804-6661854	HNPCEpiC	eye:	n/a
37	chr7:6674031-6674081	MCF-7	breast:	n/a
38	chr7:6647235-6647285	MCF10A-Er-Src	breast:	n/a
39	chr7:6689218-6689268	AG04449	skin:	fetal
40	chr7:6666368-6666418	LNCaP	prostate:	n/a
41	chr7:6655711-6655761	IMR90	lung:	fetal
42	chr7:6655727-6655777	RPTEC	kidney:	n/a
43	chr7:6647402-6647452	HCM	heart:	n/a
44	chr7:6676630-6676680	HRPEpiC	eye:	n/a
45	chr7:6691949-6691999	IMR90	lung:	fetal
46	chr7:6660095-6660145	GM12891	blood:	n/a
47	chr7:6655711-6655761	MCF-7	breast:	n/a
48	chr7:6661804-6661854	Jurkat	blood:	n/a
49	chr7:6647402-6647452	SAEC	small airway:	n/a
50	chr7:6676630-6676680	PrEC	prostate:	n/a

(count:102 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr7:6669484..6671433-chr7:6744514..6747927,3	MCF-7	breast:
2	chr7:6652722..6654943-chr7:6655850..6658545,2	K562	blood:
3	chr12:56510812..56512603-chr7:6677169..6678802,2	MCF-7	breast:
4	chr7:6683480..6686518-chr7:6689197..6691289,3	MCF-7	breast:
5	chr7:6650218..6651893-chr7:6687593..6690254,2	K562	blood:
6	chr7:6661077..6664696-chr7:6667812..6669863,3	MCF-7	breast:
7	chr7:6521808..6524278-chr7:6666674..6668575,2	K562	blood:
8	chr7:6687023..6688997-chr7:6745010..6747605,2	K562	blood:
9	chr7:6660007..6662837-chr7:6675219..6677958,3	K562	blood:
10	chr7:6680149..6683134-chr7:6689202..6690780,2	K562	blood:
11	chr7:6522385..6525546-chr7:6675389..6679461,5	MCF-7	breast:
12	chr7:6628238..6630542-chr7:6653702..6656593,2	MCF-7	breast:
13	chr7:6637338..6640081-chr7:6675258..6678566,5	MCF-7	breast:
14	chr7:6682551..6684434-chr7:6694308..6696080,2	MCF-7	breast:
15	chr7:6614762..6617092-chr7:6682142..6684739,2	K562	blood:
16	chr7:6676518..6678447-chr7:6694438..6696514,2	MCF-7	breast:
17	chr7:6650218..6651893-chr7:6687593..6690254,2	K562	blood:
18	chr7:6644575..6647418-chr7:6652621..6655088,2	K562	blood:
19	chr7:6628457..6631267-chr7:6660090..6662894,2	K562	blood:
20	chr7:6626891..6631454-chr7:6676260..6679154,6	K562	blood:
21	chr7:6659549..6661363-chr7:6670073..6672008,2	K562	blood:
22	chr7:6685863..6688294-chr7:6688920..6690681,2	MCF-7	breast:
23	chr7:6541950..6543739-chr7:6677071..6679453,2	K562	blood:
24	chr7:6644575..6647418-chr7:6652621..6655088,2	K562	blood:
25	chr7:6652722..6654943-chr7:6655850..6658545,2	K562	blood:
26	chr7:6656631..6659250-chr7:6667009..6671468,4	MCF-7	breast:
27	chr7:6674043..6676883-chr7:6677067..6680291,5	K562	blood:
28	chr7:6683480..6686518-chr7:6689197..6691289,3	MCF-7	breast:
29	chr7:6669640..6671625-chr7:6687041..6689974,2	MCF-7	breast:
30	chr7:6676193..6679067-chr7:6744810..6746794,4	K562	blood:
31	chr7:6668677..6671566-chr7:6683216..6685538,2	MCF-7	breast:
32	chr7:6681243..6682856-chr7:6746246..6748831,2	K562	blood:
33	chr7:6675962..6678642-chr7:6744432..6748032,4	MCF-7	breast:
34	chr7:6628726..6630315-chr7:6654459..6656349,2	MCF-7	breast:
35	chr7:6668305..6670110-chr7:6679585..6681865,2	MCF-7	breast:
36	chr7:6683236..6686038-chr7:6768255..6771021,2	K562	blood:
37	chr7:6672567..6674181-chr7:6688854..6690680,2	K562	blood:
38	chr17:41465185..41465700-chr7:6676633..6677215,2	Hela-S3	cervix:
39	chr7:6682112..6684474-chr7:6686272..6690280,3	MCF-7	breast:
40	chr7:6682112..6684474-chr7:6686272..6690280,3	MCF-7	breast:
41	chr7:6668744..6673941-chr7:6674951..6679228,16	MCF-7	breast:
42	chr7:6677446..6679002-chr7:6745294..6747715,2	K562	blood:
43	chr7:6642714..6644762-chr7:6645777..6647383,2	K562	blood:
44	chr7:6656839..6659879-chr7:6661538..6663786,3	K562	blood:
45	chr7:6628381..6630478-chr7:6640566..6643979,5	K562	blood:
46	chr7:6641239..6643457-chr7:6645179..6647378,2	MCF-7	breast:
47	chr7:6615703..6619364-chr7:6676501..6679314,4	K562	blood:
48	chr7:6659549..6661363-chr7:6670073..6672008,2	K562	blood:
49	chr7:6656839..6659879-chr7:6661538..6663786,3	K562	blood:
50	chr7:6631417..6634053-chr7:6644555..6647316,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF853-2	chr7:6679361-6680635	ucscGeneNc_uc003sqr_1
2	lnc-ZNF853-2	chr7:6671200-6671264	ucscGeneNc_uc003sqr_1
3	lnc-ZNF853-2	chr7:6670130-6670199	ucscGeneNc_uc003sqr_1

No data

Variant related genes	Relation type
ZNF316	TF binding region
ENSG00000260054	TF binding region
ZNF853	TF binding region
ZNF316	CpG island
ENSG00000260054	CpG island
ZNF853	CpG island
ENSG00000215045	chromatin interactions
ENSG00000139641	chromatin interactions
ENSG00000146576	chromatin interactions
ENSG00000236609	chromatin interactions
ENSG00000135482	chromatin interactions
ENSG00000232581	chromatin interactions
ENSG00000260054	chromatin interactions
ENSG00000077150	chromatin interactions
ENSG00000269781	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000205903	chromatin interactions
ENSG00000187953	chromatin interactions
ENSG00000136247	chromatin interactions
ENSG00000164631	chromatin interactions
ENSG00000136240	chromatin interactions

Extended variants
information (count: 2258 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:2258 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4418238	chr7:6643664-6643665	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs184283398	chr7:6643665-6643666	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs575053710	chr7:6643674-6643675	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs552584388	chr7:6643689-6643690	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs571168939	chr7:6643695-6643696	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs10275152	chr7:6643700-6643701	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs550367789	chr7:6643703-6643704	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs143155533	chr7:6643712-6643713	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs535559359	chr7:6643736-6643737	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs553710279	chr7:6643796-6643797	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs565727645	chr7:6643826-6643827	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs539869830	chr7:6643847-6643848	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs558551606	chr7:6643883-6643884	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs534877592	chr7:6643884-6643885	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs577101406	chr7:6643902-6643903	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs546934102	chr7:6643904-6643905	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs187433743	chr7:6643905-6643906	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs556345396	chr7:6643907-6643908	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs141928203	chr7:6643952-6643953	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs192310347	chr7:6643953-6643954	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs56214792	chr7:6643974-6643975	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs527272386	chr7:6643977-6643978	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs146337616	chr7:6643992-6643993	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs4073383	chr7:6644021-6644022	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs532055709	chr7:6644058-6644059	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs550062799	chr7:6644059-6644060	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs568326304	chr7:6644060-6644061	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs4073384	chr7:6644074-6644075	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs547484599	chr7:6644094-6644095	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs565865172	chr7:6644163-6644164	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs539433500	chr7:6644188-6644189	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs545867160	chr7:6644196-6644197	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs139579025	chr7:6644207-6644208	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs111952359	chr7:6644250-6644251	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs372453671	chr7:6644271-6644272	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs556351077	chr7:6644274-6644275	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs190794250	chr7:6644280-6644281	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs557004361	chr7:6644307-6644308	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs180841443	chr7:6644308-6644309	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs142619631	chr7:6644348-6644349	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs553879026	chr7:6644352-6644353	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs184584719	chr7:6644353-6644354	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs545455731	chr7:6644366-6644367	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs77223968	chr7:6644416-6644417	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs531873275	chr7:6644425-6644426	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs13438272	chr7:6644449-6644450	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs544084777	chr7:6644456-6644457	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs562092178	chr7:6644470-6644471	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs529426955	chr7:6644528-6644529	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs188606794	chr7:6644534-6644535	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Lynch syndrome	22585707	CNVD
Follicular lymphoma	20505157	CNVD
Breast cancer	16397240	CNVD
Raine Syndrome	17924334	CNVD
Diffuse large b-cell lymphoma	21266526	CNVD
Melanoma	18172304	CNVD
Sudden cardiac death	19188705	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Glioma	18556773	CNVD
Ovarian cancer	21720365	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Bladder cancer	21909424	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	21045282	CNVD
Disorders of sex development	21048976	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Acute myeloid leukemia	21251322	CNVD
Glioblastoma multiforme	21525872	CNVD
Autism	20685689	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:2203 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:6631000-6646200	Strong transcription	Brain Anterior Caudate	brain
2	chr7:6631000-6646800	Strong transcription	Fetal Intestine Large	intestine
3	chr7:6631200-6644200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr7:6631200-6644600	Strong transcription	Fetal Lung	lung
5	chr7:6631200-6648200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr7:6631200-6648400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr7:6631200-6648400	Strong transcription	Placenta	Placenta
8	chr7:6631200-6648600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr7:6631200-6649200	Strong transcription	Fetal Muscle Leg	muscle
10	chr7:6631200-6649200	Strong transcription	Fetal Thymus	thymus
11	chr7:6631200-6649400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr7:6631200-6649400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr7:6631200-6649400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr7:6631200-6649400	Strong transcription	Fetal Muscle Trunk	muscle
15	chr7:6631400-6644600	Strong transcription	HUES64 Cell Line	embryonic stem cell
16	chr7:6631400-6647600	Weak transcription	Stomach Mucosa	stomach
17	chr7:6631400-6648400	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr7:6631400-6649000	Strong transcription	Brain Inferior Temporal Lobe	brain
19	chr7:6631400-6649400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr7:6631400-6649400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr7:6631400-6649600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr7:6631400-6649600	Strong transcription	Monocytes-CD14+_RO01746	blood
23	chr7:6631400-6649800	Strong transcription	Fetal Intestine Small	intestine
24	chr7:6631400-6649800	Strong transcription	Fetal Stomach	stomach
25	chr7:6631600-6645000	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
26	chr7:6631600-6647200	Strong transcription	Primary B cells from peripheral blood	blood
27	chr7:6631600-6648400	Strong transcription	Duodenum Mucosa	Duodenum
28	chr7:6631600-6648800	Strong transcription	Lung	lung
29	chr7:6631600-6649400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
30	chr7:6631600-6649400	Strong transcription	Liver	Liver
31	chr7:6631600-6650800	Strong transcription	Thymus	Thymus
32	chr7:6631800-6648800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr7:6631800-6649200	Strong transcription	Dnd41	blood
34	chr7:6632000-6644800	Strong transcription	Ovary	ovary
35	chr7:6632000-6646200	Strong transcription	Skeletal Muscle Male	skeletal muscle
36	chr7:6632000-6648800	Strong transcription	Sigmoid Colon	Sigmoid Colon
37	chr7:6632000-6649400	Strong transcription	Primary neutrophils fromperipheralblood	blood
38	chr7:6632000-6649400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr7:6632000-6649600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
40	chr7:6632000-6650600	Strong transcription	Brain Germinal Matrix	brain
41	chr7:6632200-6648400	Strong transcription	Primary T cells from cord blood	blood
42	chr7:6632200-6648400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
43	chr7:6632200-6648600	Strong transcription	Cortex derived primary cultured neurospheres	brain
44	chr7:6632200-6648800	Strong transcription	Primary monocytes fromperipheralblood	blood
45	chr7:6632400-6644600	Strong transcription	Rectal Mucosa Donor 31	rectum
46	chr7:6632400-6646400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr7:6632400-6648400	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr7:6632400-6648800	Strong transcription	Skeletal Muscle Female	skeletal muscle
49	chr7:6632400-6649400	Strong transcription	Stomach Smooth Muscle	stomach
50	chr7:6632400-6649400	Strong transcription	Spleen	Spleen

The 2.0 version of rSNPBase

Variant report

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